RNA–Protein interactions for RNA: ENST00000372187.9

FAM213A-203, Transcript of Redox-regulatory protein FAM213A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM213A, Length 1,647 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM213A-203ENST00000372187 NISCHQ9Y2I1 1504 aa31.33■■■□□ 2.61
FAM213A-203ENST00000372187 AEBP2Q6ZN18 517 aaPredicted RBP31.06■■■□□ 2.56
FAM213A-203ENST00000372187 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
FAM213A-203ENST00000372187 CCDC180Q9P1Z9 1646 aa28.16■■■□□ 2.1
FAM213A-203ENST00000372187 ABCC9O60706 1549 aa27.91■■■□□ 2.06
FAM213A-203ENST00000372187 RB1CC1Q8TDY2 1594 aa26.7■■□□□ 1.86
FAM213A-203ENST00000372187 SENP3Q9H4L4 574 aaPredicted RBP26.54■■□□□ 1.84
FAM213A-203ENST00000372187 NACADO15069 1562 aa26.52■■□□□ 1.84
FAM213A-203ENST00000372187 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
FAM213A-203ENST00000372187 DCAF8L2P0C7V8 631 aa26.36■■□□□ 1.81
FAM213A-203ENST00000372187 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
FAM213A-203ENST00000372187 MYO15BQ96JP2 1530 aa26.17■■□□□ 1.78
FAM213A-203ENST00000372187 UNC13AQ9UPW8 1703 aa26.13■■□□□ 1.77
FAM213A-203ENST00000372187 DCAF1Q9Y4B6 1507 aa26■■□□□ 1.75
FAM213A-203ENST00000372187 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
FAM213A-203ENST00000372187 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
FAM213A-203ENST00000372187 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
FAM213A-203ENST00000372187 SHROOM4Q9ULL8 1493 aa25.77■■□□□ 1.72
FAM213A-203ENST00000372187 SCRIBQ14160 1630 aa25.64■■□□□ 1.7
FAM213A-203ENST00000372187 CC2D2AQ9P2K1 1620 aa25.25■■□□□ 1.63
FAM213A-203ENST00000372187 EIF4G1Q04637 1599 aaKnown RBP25.23■■□□□ 1.63
FAM213A-203ENST00000372187 CECR2Q9BXF3 1484 aa25.12■■□□□ 1.61
FAM213A-203ENST00000372187 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
FAM213A-203ENST00000372187 FOXD1Q16676 465 aa24.7■■□□□ 1.54
FAM213A-203ENST00000372187 RSF1Q96T23 1441 aaPredicted RBP24.49■■□□□ 1.51
FAM213A-203ENST00000372187 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
FAM213A-203ENST00000372187 NCAPD3P42695 1498 aa24.4■■□□□ 1.5
FAM213A-203ENST00000372187 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
FAM213A-203ENST00000372187 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
FAM213A-203ENST00000372187 BAZ1AQ9NRL2 1556 aaPredicted RBP24.36■■□□□ 1.49
FAM213A-203ENST00000372187 HMGXB3Q12766 1538 aa24.33■■□□□ 1.49
FAM213A-203ENST00000372187 MROH2BQ7Z745 1585 aa24.23■■□□□ 1.47
FAM213A-203ENST00000372187 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
FAM213A-203ENST00000372187 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
FAM213A-203ENST00000372187 ERCC6Q03468 1493 aa24.14■■□□□ 1.46
FAM213A-203ENST00000372187 WIZO95785 1651 aa24.08■■□□□ 1.45
FAM213A-203ENST00000372187 CUX2O14529 1486 aa24.01■■□□□ 1.43
FAM213A-203ENST00000372187 NESP48681 1621 aa23.99■■□□□ 1.43
FAM213A-203ENST00000372187 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
FAM213A-203ENST00000372187 TOP2AP11388 1531 aaKnown RBP23.88■■□□□ 1.41
FAM213A-203ENST00000372187 KIF21AQ7Z4S6 1674 aa23.8■■□□□ 1.4
FAM213A-203ENST00000372187 THOC2Q8NI27 1593 aaKnown RBP23.79■■□□□ 1.4
FAM213A-203ENST00000372187 PDS5BQ9NTI5 1447 aa23.74■■□□□ 1.39
FAM213A-203ENST00000372187 DNAJC5Q9H3Z4 198 aa23.7■■□□□ 1.38
FAM213A-203ENST00000372187 CADPSQ9ULU8 1353 aa23.67■■□□□ 1.38
FAM213A-203ENST00000372187 PLPPR3Q6T4P5 718 aa23.66■■□□□ 1.38
FAM213A-203ENST00000372187 CCDC88BA6NC98 1476 aa23.55■■□□□ 1.36
FAM213A-203ENST00000372187 MRC2Q9UBG0 1479 aa23.54■■□□□ 1.36
FAM213A-203ENST00000372187 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
FAM213A-203ENST00000372187 WDR62O43379 1518 aa23.48■■□□□ 1.35
FAM213A-203ENST00000372187 TRIM41Q8WV44 630 aa23.48■■□□□ 1.35
FAM213A-203ENST00000372187 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
FAM213A-203ENST00000372187 CFTRP13569 1480 aa23.45■■□□□ 1.35
FAM213A-203ENST00000372187 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
FAM213A-203ENST00000372187 LOC105371045A0A1W2PR82 267 aa23.36■■□□□ 1.33
FAM213A-203ENST00000372187 ABCC8Q09428 1581 aa23.27■■□□□ 1.32
FAM213A-203ENST00000372187 URB2Q14146 1524 aaKnown RBP23.23■■□□□ 1.31
FAM213A-203ENST00000372187 MSH5O43196 834 aa23.15■■□□□ 1.3
FAM213A-203ENST00000372187 PIAS4Q8N2W9 510 aaPredicted RBP23.11■■□□□ 1.29
FAM213A-203ENST00000372187 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
FAM213A-203ENST00000372187 ADRA2BP18089 450 aa23.04■■□□□ 1.28
FAM213A-203ENST00000372187 EEA1Q15075 1411 aa23.03■■□□□ 1.28
FAM213A-203ENST00000372187 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
FAM213A-203ENST00000372187 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
FAM213A-203ENST00000372187 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
FAM213A-203ENST00000372187 WRNQ14191 1432 aaPredicted RBP eCLIP23.01■■□□□ 1.27
FAM213A-203ENST00000372187 SYNJ1O43426 1573 aa23■■□□□ 1.27
FAM213A-203ENST00000372187 IFT140Q96RY7 1462 aa23■■□□□ 1.27
FAM213A-203ENST00000372187 ZNF608Q9ULD9 1512 aaPredicted RBP22.91■■□□□ 1.26
FAM213A-203ENST00000372187 SOGA1O94964 1423 aa22.89■■□□□ 1.26
FAM213A-203ENST00000372187 EIF4G3O43432 1585 aaKnown RBP22.89■■□□□ 1.26
FAM213A-203ENST00000372187 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.25
FAM213A-203ENST00000372187 PCGF6Q9BYE7 350 aa22.89■■□□□ 1.25
FAM213A-203ENST00000372187 TOP2BQ02880 1626 aa22.87■■□□□ 1.25
FAM213A-203ENST00000372187 OSCARQ8IYS5 282 aa22.86■■□□□ 1.25
FAM213A-203ENST00000372187 HRCP23327 699 aa22.85■■□□□ 1.25
FAM213A-203ENST00000372187 TARBP1Q13395 1621 aaKnown RBP22.82■■□□□ 1.24
FAM213A-203ENST00000372187 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
FAM213A-203ENST00000372187 KIF21BO75037 1637 aa22.8■■□□□ 1.24
FAM213A-203ENST00000372187 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
FAM213A-203ENST00000372187 RUSC2Q8N2Y8 1516 aa22.8■■□□□ 1.24
FAM213A-203ENST00000372187 TNIKQ9UKE5 1360 aa22.74■■□□□ 1.23
FAM213A-203ENST00000372187 GOLGA3Q08378 1498 aa22.73■■□□□ 1.23
FAM213A-203ENST00000372187 CHD1O14646 1710 aa22.72■■□□□ 1.23
FAM213A-203ENST00000372187 AQRO60306 1485 aaKnown RBP eCLIP22.71■■□□□ 1.231e-7■■■■□ 26.7
FAM213A-203ENST00000372187 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
FAM213A-203ENST00000372187 RAD54L2Q9Y4B4 1467 aa22.69■■□□□ 1.22
FAM213A-203ENST00000372187 CUX1P39880 1505 aa22.68■■□□□ 1.22
FAM213A-203ENST00000372187 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
FAM213A-203ENST00000372187 CEP162Q5TB80 1403 aa22.68■■□□□ 1.22
FAM213A-203ENST00000372187 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
FAM213A-203ENST00000372187 RIMBP3CA6NJZ7 1639 aa22.65■■□□□ 1.22
FAM213A-203ENST00000372187 RIMBP3BA6NNM3 1639 aa22.65■■□□□ 1.22
FAM213A-203ENST00000372187 RIMBP3Q9UFD9 1639 aa22.65■■□□□ 1.22
FAM213A-203ENST00000372187 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
FAM213A-203ENST00000372187 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
FAM213A-203ENST00000372187 ARHGEF11O15085 1522 aa22.57■■□□□ 1.2
FAM213A-203ENST00000372187 FBLN2P98095 1184 aa22.56■■□□□ 1.2
FAM213A-203ENST00000372187 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
FAM213A-203ENST00000372187 PBRM1Q86U86 1689 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms