RNA–Protein interactions for RNA: ENST00000569958.5

PMM2-216, Transcript of phosphomannomutase 2, humanhuman

TSL 2 BASIC

Gene PMM2, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM2-216ENST00000569958 NISCHQ9Y2I1 1504 aa30.47■■■□□ 2.47
PMM2-216ENST00000569958 ABCC9O60706 1549 aa27.71■■■□□ 2.03
PMM2-216ENST00000569958 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.98
PMM2-216ENST00000569958 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
PMM2-216ENST00000569958 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
PMM2-216ENST00000569958 NACADO15069 1562 aa26.06■■□□□ 1.76
PMM2-216ENST00000569958 DCAF8L2P0C7V8 631 aa25.78■■□□□ 1.72
PMM2-216ENST00000569958 PABPN1Q86U42 306 aaKnown RBP eCLIP25.74■■□□□ 1.71
PMM2-216ENST00000569958 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
PMM2-216ENST00000569958 UNC13AQ9UPW8 1703 aa25.54■■□□□ 1.68
PMM2-216ENST00000569958 BICRAQ9NZM4 1560 aa25.49■■□□□ 1.67
PMM2-216ENST00000569958 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
PMM2-216ENST00000569958 DCAF1Q9Y4B6 1507 aa25.21■■□□□ 1.63
PMM2-216ENST00000569958 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
PMM2-216ENST00000569958 CECR2Q9BXF3 1484 aa25.02■■□□□ 1.6
PMM2-216ENST00000569958 CC2D2AQ9P2K1 1620 aa25.01■■□□□ 1.59
PMM2-216ENST00000569958 SCRIBQ14160 1630 aa24.94■■□□□ 1.58
PMM2-216ENST00000569958 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
PMM2-216ENST00000569958 DNAJC5Q9H3Z4 198 aa24.38■■□□□ 1.49
PMM2-216ENST00000569958 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
PMM2-216ENST00000569958 CUX2O14529 1486 aa24.07■■□□□ 1.44
PMM2-216ENST00000569958 ERCC6Q03468 1493 aa23.97■■□□□ 1.43
PMM2-216ENST00000569958 ATAD2BQ9ULI0 1458 aa23.94■■□□□ 1.42
PMM2-216ENST00000569958 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
PMM2-216ENST00000569958 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
PMM2-216ENST00000569958 SMARCA4P51532 1647 aa23.8■■□□□ 1.4
PMM2-216ENST00000569958 NESP48681 1621 aa23.7■■□□□ 1.38
PMM2-216ENST00000569958 BAZ1AQ9NRL2 1556 aaPredicted RBP23.68■■□□□ 1.38
PMM2-216ENST00000569958 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
PMM2-216ENST00000569958 PEG3Q9GZU2 1588 aa23.62■■□□□ 1.37
PMM2-216ENST00000569958 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
PMM2-216ENST00000569958 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
PMM2-216ENST00000569958 PDS5BQ9NTI5 1447 aa23.46■■□□□ 1.35
PMM2-216ENST00000569958 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
PMM2-216ENST00000569958 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
PMM2-216ENST00000569958 CADPSQ9ULU8 1353 aa23.33■■□□□ 1.33
PMM2-216ENST00000569958 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
PMM2-216ENST00000569958 WDR62O43379 1518 aa23.19■■□□□ 1.3
PMM2-216ENST00000569958 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
PMM2-216ENST00000569958 CEP164Q9UPV0 1460 aa23.09■■□□□ 1.29
PMM2-216ENST00000569958 WIZO95785 1651 aa23.09■■□□□ 1.29
PMM2-216ENST00000569958 FANCD2Q9BXW9 1451 aa23.03■■□□□ 1.28
PMM2-216ENST00000569958 CFTRP13569 1480 aa23■■□□□ 1.27
PMM2-216ENST00000569958 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
PMM2-216ENST00000569958 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
PMM2-216ENST00000569958 TOP2AP11388 1531 aaKnown RBP22.86■■□□□ 1.25
PMM2-216ENST00000569958 URB2Q14146 1524 aaKnown RBP22.84■■□□□ 1.25
PMM2-216ENST00000569958 IFT140Q96RY7 1462 aa22.66■■□□□ 1.22
PMM2-216ENST00000569958 PRDM2Q13029 1718 aa22.62■■□□□ 1.21
PMM2-216ENST00000569958 ZNF608Q9ULD9 1512 aaPredicted RBP22.59■■□□□ 1.21
PMM2-216ENST00000569958 CCDC88BA6NC98 1476 aa22.59■■□□□ 1.21
PMM2-216ENST00000569958 RIMBP3CA6NJZ7 1639 aa22.57■■□□□ 1.2
PMM2-216ENST00000569958 RIMBP3BA6NNM3 1639 aa22.57■■□□□ 1.2
PMM2-216ENST00000569958 RIMBP3Q9UFD9 1639 aa22.57■■□□□ 1.2
PMM2-216ENST00000569958 TOPBP1Q92547 1522 aa22.56■■□□□ 1.2
PMM2-216ENST00000569958 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
PMM2-216ENST00000569958 ARHGEF11O15085 1522 aa22.52■■□□□ 1.19
PMM2-216ENST00000569958 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
PMM2-216ENST00000569958 EIF4G3O43432 1585 aaKnown RBP22.44■■□□□ 1.18
PMM2-216ENST00000569958 AQRO60306 1485 aaKnown RBP eCLIP22.36■■□□□ 1.171e-7■■■■□ 20.2
PMM2-216ENST00000569958 CYB5RLQ6IPT4 315 aa22.36■■□□□ 1.17
PMM2-216ENST00000569958 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
PMM2-216ENST00000569958 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
PMM2-216ENST00000569958 ARAP1Q96P48 1450 aa22.28■■□□□ 1.16
PMM2-216ENST00000569958 CHD1O14646 1710 aa22.27■■□□□ 1.16
PMM2-216ENST00000569958 FBLN2P98095 1184 aa22.26■■□□□ 1.15
PMM2-216ENST00000569958 SOGA1O94964 1423 aa22.21■■□□□ 1.15
PMM2-216ENST00000569958 RAD54L2Q9Y4B4 1467 aa22.2■■□□□ 1.14
PMM2-216ENST00000569958 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
PMM2-216ENST00000569958 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
PMM2-216ENST00000569958 WDR97A6NE52 1622 aa22.17■■□□□ 1.14
PMM2-216ENST00000569958 SNAPC4Q5SXM2 1469 aa22.13■■□□□ 1.13
PMM2-216ENST00000569958 FGD5Q6ZNL6 1462 aa22.12■■□□□ 1.13
PMM2-216ENST00000569958 MAGI1Q96QZ7 1491 aaPredicted RBP22.11■■□□□ 1.13
PMM2-216ENST00000569958 CLASP1Q7Z460 1538 aa22.11■■□□□ 1.13
PMM2-216ENST00000569958 CHMP7Q8WUX9 453 aaPredicted RBP22.09■■□□□ 1.13
PMM2-216ENST00000569958 GRIN2BQ13224 1484 aa22.07■■□□□ 1.12
PMM2-216ENST00000569958 SYNJ1O43426 1573 aa22.07■■□□□ 1.12
PMM2-216ENST00000569958 CUX1P39880 1505 aa22.04■■□□□ 1.12
PMM2-216ENST00000569958 SYNJ2O15056 1496 aa22.03■■□□□ 1.12
PMM2-216ENST00000569958 GAPVD1Q14C86 1478 aa21.93■■□□□ 1.1
PMM2-216ENST00000569958 ABCA10Q8WWZ4 1543 aa21.89■■□□□ 1.09
PMM2-216ENST00000569958 PBRM1Q86U86 1689 aa21.85■■□□□ 1.09
PMM2-216ENST00000569958 ABCA5Q8WWZ7 1642 aa21.84■■□□□ 1.09
PMM2-216ENST00000569958 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
PMM2-216ENST00000569958 GRIN2AQ12879 1464 aa21.77■■□□□ 1.08
PMM2-216ENST00000569958 WRNQ14191 1432 aaPredicted RBP eCLIP21.75■■□□□ 1.07
PMM2-216ENST00000569958 NUP160Q12769 1436 aa21.73■■□□□ 1.07
PMM2-216ENST00000569958 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
PMM2-216ENST00000569958 ERCC6L2Q5T890 1561 aa21.68■■□□□ 1.06
PMM2-216ENST00000569958 CEP170Q5SW79 1584 aa21.67■■□□□ 1.06
PMM2-216ENST00000569958 FHAD1B1AJZ9 1412 aa21.67■■□□□ 1.06
PMM2-216ENST00000569958 TOP2BQ02880 1626 aa21.62■■□□□ 1.05
PMM2-216ENST00000569958 SHROOM2Q13796 1616 aa21.62■■□□□ 1.05
PMM2-216ENST00000569958 ERICH3Q5RHP9 1530 aa21.6■■□□□ 1.05
PMM2-216ENST00000569958 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
PMM2-216ENST00000569958 SUPT5HO00267 1087 aaKnown RBP21.59■■□□□ 1.05
PMM2-216ENST00000569958 PRG4Q92954 1404 aaPredicted RBP21.52■■□□□ 1.04
PMM2-216ENST00000569958 JPH4Q96JJ6 628 aa21.49■■□□□ 1.03
PMM2-216ENST00000569958 KIF13AQ9H1H9 1805 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms