RNA–Protein interactions for RNA: ENST00000487256.1

CDHR4-205, Transcript of cadherin related family member 4, humanhuman

TSL 5 BASIC

Gene CDHR4, Length 1,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-205ENST00000487256 NISCHQ9Y2I1 1504 aa30.79■■■□□ 2.52
CDHR4-205ENST00000487256 ABCC9O60706 1549 aa28.01■■■□□ 2.07
CDHR4-205ENST00000487256 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
CDHR4-205ENST00000487256 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
CDHR4-205ENST00000487256 DNAJC5BQ9UF47 199 aa26.47■■□□□ 1.83
CDHR4-205ENST00000487256 NACADO15069 1562 aa26.36■■□□□ 1.81
CDHR4-205ENST00000487256 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
CDHR4-205ENST00000487256 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
CDHR4-205ENST00000487256 PABPN1Q86U42 306 aaKnown RBP eCLIP25.98■■□□□ 1.75
CDHR4-205ENST00000487256 MYO15BQ96JP2 1530 aa25.91■■□□□ 1.74
CDHR4-205ENST00000487256 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
CDHR4-205ENST00000487256 SHROOM4Q9ULL8 1493 aa25.49■■□□□ 1.67
CDHR4-205ENST00000487256 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
CDHR4-205ENST00000487256 ZCCHC6Q5VYS8 1495 aaKnown RBP25.46■■□□□ 1.67
CDHR4-205ENST00000487256 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
CDHR4-205ENST00000487256 CECR2Q9BXF3 1484 aa25.28■■□□□ 1.64
CDHR4-205ENST00000487256 SCRIBQ14160 1630 aa25.27■■□□□ 1.64
CDHR4-205ENST00000487256 EIF4G1Q04637 1599 aaKnown RBP25.2■■□□□ 1.62
CDHR4-205ENST00000487256 DNAJC5Q9H3Z4 198 aa24.58■■□□□ 1.53
CDHR4-205ENST00000487256 CUX2O14529 1486 aa24.32■■□□□ 1.48
CDHR4-205ENST00000487256 NCAPD3P42695 1498 aa24.3■■□□□ 1.48
CDHR4-205ENST00000487256 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
CDHR4-205ENST00000487256 ATAD2BQ9ULI0 1458 aa24.17■■□□□ 1.46
CDHR4-205ENST00000487256 SMARCA2P51531 1590 aa24.14■■□□□ 1.45
CDHR4-205ENST00000487256 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
CDHR4-205ENST00000487256 SMARCA4P51532 1647 aa24.11■■□□□ 1.45
CDHR4-205ENST00000487256 NESP48681 1621 aa23.97■■□□□ 1.43
CDHR4-205ENST00000487256 BAZ1AQ9NRL2 1556 aaPredicted RBP23.95■■□□□ 1.42
CDHR4-205ENST00000487256 BAZ1BQ9UIG0 1483 aaKnown RBP23.94■■□□□ 1.42
CDHR4-205ENST00000487256 PEG3Q9GZU2 1588 aa23.89■■□□□ 1.41
CDHR4-205ENST00000487256 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
CDHR4-205ENST00000487256 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
CDHR4-205ENST00000487256 KIF21AQ7Z4S6 1674 aa23.74■■□□□ 1.39
CDHR4-205ENST00000487256 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
CDHR4-205ENST00000487256 PDS5BQ9NTI5 1447 aa23.68■■□□□ 1.38
CDHR4-205ENST00000487256 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
CDHR4-205ENST00000487256 MRC2Q9UBG0 1479 aa23.49■■□□□ 1.35
CDHR4-205ENST00000487256 WDR62O43379 1518 aa23.45■■□□□ 1.34
CDHR4-205ENST00000487256 WIZO95785 1651 aa23.44■■□□□ 1.34
CDHR4-205ENST00000487256 TRIM41Q8WV44 630 aa23.36■■□□□ 1.33
CDHR4-205ENST00000487256 CEP164Q9UPV0 1460 aa23.34■■□□□ 1.33
CDHR4-205ENST00000487256 FANCD2Q9BXW9 1451 aa23.27■■□□□ 1.32
CDHR4-205ENST00000487256 CFTRP13569 1480 aa23.21■■□□□ 1.31
CDHR4-205ENST00000487256 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
CDHR4-205ENST00000487256 OSCARQ8IYS5 282 aa23.12■■□□□ 1.29
CDHR4-205ENST00000487256 PRDM2Q13029 1718 aa23.1■■□□□ 1.29
CDHR4-205ENST00000487256 RSF1Q96T23 1441 aaPredicted RBP23.09■■□□□ 1.29
CDHR4-205ENST00000487256 URB2Q14146 1524 aaKnown RBP23.08■■□□□ 1.29
CDHR4-205ENST00000487256 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.25
CDHR4-205ENST00000487256 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.25
CDHR4-205ENST00000487256 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.25
CDHR4-205ENST00000487256 IFT140Q96RY7 1462 aa22.88■■□□□ 1.25
CDHR4-205ENST00000487256 ZNF608Q9ULD9 1512 aaPredicted RBP22.83■■□□□ 1.25
CDHR4-205ENST00000487256 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
CDHR4-205ENST00000487256 TOPBP1Q92547 1522 aa22.81■■□□□ 1.24
CDHR4-205ENST00000487256 ABCC8Q09428 1581 aa22.79■■□□□ 1.24
CDHR4-205ENST00000487256 ARHGEF11O15085 1522 aa22.77■■□□□ 1.24
CDHR4-205ENST00000487256 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
CDHR4-205ENST00000487256 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
CDHR4-205ENST00000487256 CHD1O14646 1710 aa22.68■■□□□ 1.22
CDHR4-205ENST00000487256 TARBP1Q13395 1621 aaKnown RBP22.64■■□□□ 1.22
CDHR4-205ENST00000487256 AQRO60306 1485 aaKnown RBP eCLIP22.59■■□□□ 1.21
CDHR4-205ENST00000487256 CYB5RLQ6IPT4 315 aa22.57■■□□□ 1.2
CDHR4-205ENST00000487256 POLA1P09884 1462 aaPredicted RBP22.54■■□□□ 1.2
CDHR4-205ENST00000487256 ARAP1Q96P48 1450 aa22.5■■□□□ 1.19
CDHR4-205ENST00000487256 FBLN2P98095 1184 aa22.5■■□□□ 1.19
CDHR4-205ENST00000487256 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
CDHR4-205ENST00000487256 RAD54L2Q9Y4B4 1467 aa22.44■■□□□ 1.18
CDHR4-205ENST00000487256 SOGA1O94964 1423 aa22.43■■□□□ 1.18
CDHR4-205ENST00000487256 TRHP20396 242 aaPredicted RBP22.43■■□□□ 1.18
CDHR4-205ENST00000487256 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.18
CDHR4-205ENST00000487256 SNAPC4Q5SXM2 1469 aa22.37■■□□□ 1.17
CDHR4-205ENST00000487256 FGD5Q6ZNL6 1462 aa22.36■■□□□ 1.17
CDHR4-205ENST00000487256 CLASP1Q7Z460 1538 aa22.36■■□□□ 1.17
CDHR4-205ENST00000487256 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
CDHR4-205ENST00000487256 MAGI1Q96QZ7 1491 aaPredicted RBP22.34■■□□□ 1.17
CDHR4-205ENST00000487256 CHMP7Q8WUX9 453 aaPredicted RBP22.3■■□□□ 1.16
CDHR4-205ENST00000487256 GRIN2BQ13224 1484 aa22.29■■□□□ 1.16
CDHR4-205ENST00000487256 CUX1P39880 1505 aa22.29■■□□□ 1.16
CDHR4-205ENST00000487256 SYNJ2O15056 1496 aa22.25■■□□□ 1.15
CDHR4-205ENST00000487256 PBRM1Q86U86 1689 aa22.25■■□□□ 1.15
CDHR4-205ENST00000487256 GAPVD1Q14C86 1478 aa22.17■■□□□ 1.14
CDHR4-205ENST00000487256 ABCA5Q8WWZ7 1642 aa22.12■■□□□ 1.13
CDHR4-205ENST00000487256 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
CDHR4-205ENST00000487256 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
CDHR4-205ENST00000487256 GRIN2AQ12879 1464 aa22■■□□□ 1.11
CDHR4-205ENST00000487256 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
CDHR4-205ENST00000487256 WRNQ14191 1432 aaPredicted RBP eCLIP21.96■■□□□ 1.11
CDHR4-205ENST00000487256 ERCC6L2Q5T890 1561 aa21.95■■□□□ 1.1
CDHR4-205ENST00000487256 CEP170Q5SW79 1584 aa21.94■■□□□ 1.1
CDHR4-205ENST00000487256 NUP160Q12769 1436 aa21.93■■□□□ 1.1
CDHR4-205ENST00000487256 BIVM-ERCC5R4GMW8 1640 aa21.92■■□□□ 1.1
CDHR4-205ENST00000487256 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
CDHR4-205ENST00000487256 TOP2BQ02880 1626 aa21.89■■□□□ 1.09
CDHR4-205ENST00000487256 FHAD1B1AJZ9 1412 aa21.88■■□□□ 1.09
CDHR4-205ENST00000487256 ERICH3Q5RHP9 1530 aa21.85■■□□□ 1.09
CDHR4-205ENST00000487256 SUPT5HO00267 1087 aaKnown RBP21.82■■□□□ 1.08
CDHR4-205ENST00000487256 KIF13AQ9H1H9 1805 aa21.81■■□□□ 1.08
CDHR4-205ENST00000487256 PRG4Q92954 1404 aaPredicted RBP21.73■■□□□ 1.07
CDHR4-205ENST00000487256 JPH4Q96JJ6 628 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms