RNA–Protein interactions for RNA: ENST00000373209.2

PRF1-201, Transcript of perforin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRF1, Length 2,492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRF1-201ENST00000373209 NISCHQ9Y2I1 1504 aa31.73■■■□□ 2.67
PRF1-201ENST00000373209 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
PRF1-201ENST00000373209 CCDC180Q9P1Z9 1646 aa26.95■■□□□ 1.9
PRF1-201ENST00000373209 ZCCHC6Q5VYS8 1495 aaKnown RBP26.8■■□□□ 1.88
PRF1-201ENST00000373209 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
PRF1-201ENST00000373209 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
PRF1-201ENST00000373209 DCAF1Q9Y4B6 1507 aa25.87■■□□□ 1.73
PRF1-201ENST00000373209 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
PRF1-201ENST00000373209 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
PRF1-201ENST00000373209 SCRIBQ14160 1630 aa25.47■■□□□ 1.67
PRF1-201ENST00000373209 ABCC9O60706 1549 aa25.33■■□□□ 1.65
PRF1-201ENST00000373209 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
PRF1-201ENST00000373209 LOC105371045A0A1W2PR82 267 aa25.06■■□□□ 1.6
PRF1-201ENST00000373209 NACADO15069 1562 aa24.94■■□□□ 1.58
PRF1-201ENST00000373209 RB1CC1Q8TDY2 1594 aa24.92■■□□□ 1.58
PRF1-201ENST00000373209 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
PRF1-201ENST00000373209 PCGF6Q9BYE7 350 aa24.84■■□□□ 1.57
PRF1-201ENST00000373209 MROH2BQ7Z745 1585 aa24.76■■□□□ 1.55
PRF1-201ENST00000373209 WIZO95785 1651 aa24.67■■□□□ 1.54
PRF1-201ENST00000373209 TRIM41Q8WV44 630 aa24.66■■□□□ 1.54
PRF1-201ENST00000373209 FAM9AQ8IZU1 332 aaPredicted RBP24.64■■□□□ 1.53
PRF1-201ENST00000373209 HRCP23327 699 aa24.6■■□□□ 1.53
PRF1-201ENST00000373209 EHMT2Q96KQ7 1210 aa24.58■■□□□ 1.53
PRF1-201ENST00000373209 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
PRF1-201ENST00000373209 PPARGC1BQ86YN6 1023 aaKnown RBP24.37■■□□□ 1.49
PRF1-201ENST00000373209 BAZ1AQ9NRL2 1556 aaPredicted RBP24.35■■□□□ 1.49
PRF1-201ENST00000373209 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
PRF1-201ENST00000373209 SMARCA4P51532 1647 aa24.22■■□□□ 1.47
PRF1-201ENST00000373209 TRIM26Q12899 539 aaPredicted RBP24.22■■□□□ 1.47
PRF1-201ENST00000373209 EIF4G1Q04637 1599 aaKnown RBP24.16■■□□□ 1.46
PRF1-201ENST00000373209 TOP2AP11388 1531 aaKnown RBP24.12■■□□□ 1.45
PRF1-201ENST00000373209 ABCC8Q09428 1581 aa24.11■■□□□ 1.45
PRF1-201ENST00000373209 CCDC88BA6NC98 1476 aa24.1■■□□□ 1.45
PRF1-201ENST00000373209 BICRAQ9NZM4 1560 aa24.05■■□□□ 1.44
PRF1-201ENST00000373209 SMARCA2P51531 1590 aa24.05■■□□□ 1.44
PRF1-201ENST00000373209 SOGA1O94964 1423 aa23.81■■□□□ 1.4
PRF1-201ENST00000373209 RUSC2Q8N2Y8 1516 aa23.75■■□□□ 1.39
PRF1-201ENST00000373209 TTBK1Q5TCY1 1321 aaPredicted RBP23.72■■□□□ 1.39
PRF1-201ENST00000373209 PEG3Q9GZU2 1588 aa23.65■■□□□ 1.38
PRF1-201ENST00000373209 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
PRF1-201ENST00000373209 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
PRF1-201ENST00000373209 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
PRF1-201ENST00000373209 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
PRF1-201ENST00000373209 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
PRF1-201ENST00000373209 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
PRF1-201ENST00000373209 SYNJ1O43426 1573 aa23.54■■□□□ 1.36
PRF1-201ENST00000373209 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
PRF1-201ENST00000373209 ZEB1P37275 1124 aaPredicted RBP23.48■■□□□ 1.35
PRF1-201ENST00000373209 TNIKQ9UKE5 1360 aa23.44■■□□□ 1.34
PRF1-201ENST00000373209 EEA1Q15075 1411 aa23.39■■□□□ 1.33
PRF1-201ENST00000373209 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
PRF1-201ENST00000373209 RANGAP1P46060 587 aaPredicted RBP23.32■■□□□ 1.32
PRF1-201ENST00000373209 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
PRF1-201ENST00000373209 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
PRF1-201ENST00000373209 RAPGEF2Q9Y4G8 1499 aa23.21■■□□□ 1.31
PRF1-201ENST00000373209 KIF21BO75037 1637 aa23.19■■□□□ 1.3
PRF1-201ENST00000373209 TOP2BQ02880 1626 aa23.16■■□□□ 1.3
PRF1-201ENST00000373209 CLIP1P30622 1438 aa23.14■■□□□ 1.29
PRF1-201ENST00000373209 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
PRF1-201ENST00000373209 HMGXB3Q12766 1538 aa23.08■■□□□ 1.29
PRF1-201ENST00000373209 BIVM-ERCC5R4GMW8 1640 aa23.06■■□□□ 1.28
PRF1-201ENST00000373209 CUX1P39880 1505 aa23.03■■□□□ 1.28
PRF1-201ENST00000373209 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
PRF1-201ENST00000373209 HNRNPUL2Q1KMD3 747 aaKnown RBP23.01■■□□□ 1.27
PRF1-201ENST00000373209 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
PRF1-201ENST00000373209 CFTRP13569 1480 aa22.93■■□□□ 1.26
PRF1-201ENST00000373209 PRXQ9BXM0 1461 aa22.88■■□□□ 1.25
PRF1-201ENST00000373209 APLP2Q06481 763 aa22.88■■□□□ 1.25
PRF1-201ENST00000373209 KIF27Q86VH2 1401 aa22.81■■□□□ 1.24
PRF1-201ENST00000373209 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
PRF1-201ENST00000373209 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
PRF1-201ENST00000373209 CC2D2AQ9P2K1 1620 aa22.77■■□□□ 1.24
PRF1-201ENST00000373209 KANK4Q5T7N3 995 aaPredicted RBP22.76■■□□□ 1.23
PRF1-201ENST00000373209 PRDM2Q13029 1718 aa22.74■■□□□ 1.23
PRF1-201ENST00000373209 DIEXFQ68CQ4 756 aaKnown RBP22.74■■□□□ 1.23
PRF1-201ENST00000373209 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
PRF1-201ENST00000373209 CUX2O14529 1486 aa22.71■■□□□ 1.23
PRF1-201ENST00000373209 SCAF1Q9H7N4 1312 aaKnown RBP22.68■■□□□ 1.22
PRF1-201ENST00000373209 FGD5Q6ZNL6 1462 aa22.64■■□□□ 1.22
PRF1-201ENST00000373209 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
PRF1-201ENST00000373209 IGF1RP08069 1367 aa22.62■■□□□ 1.21
PRF1-201ENST00000373209 DNAJC5BQ9UF47 199 aa22.57■■□□□ 1.2
PRF1-201ENST00000373209 NESP48681 1621 aa22.57■■□□□ 1.2
PRF1-201ENST00000373209 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
PRF1-201ENST00000373209 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
PRF1-201ENST00000373209 MYT1Q01538 1121 aa22.53■■□□□ 1.2
PRF1-201ENST00000373209 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
PRF1-201ENST00000373209 ITGAEP38570 1179 aa22.51■■□□□ 1.19
PRF1-201ENST00000373209 NEUROD1Q13562 356 aa22.51■■□□□ 1.19
PRF1-201ENST00000373209 RAD54L2Q9Y4B4 1467 aa22.51■■□□□ 1.19
PRF1-201ENST00000373209 P3H3Q8IVL6 736 aa22.5■■□□□ 1.19
PRF1-201ENST00000373209 DHX57Q6P158 1386 aaKnown RBP22.42■■□□□ 1.18
PRF1-201ENST00000373209 ACIN1Q9UKV3 1341 aaKnown RBP22.42■■□□□ 1.18
PRF1-201ENST00000373209 RRBP1Q9P2E9 1410 aaKnown RBP22.4■■□□□ 1.18
PRF1-201ENST00000373209 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
PRF1-201ENST00000373209 POLA1P09884 1462 aaPredicted RBP22.38■■□□□ 1.17
PRF1-201ENST00000373209 TOPBP1Q92547 1522 aa22.37■■□□□ 1.17
PRF1-201ENST00000373209 YTHDC1Q96MU7 727 aaKnown RBP22.36■■□□□ 1.17
PRF1-201ENST00000373209 CCNB3Q8WWL7 1395 aa22.36■■□□□ 1.17
PRF1-201ENST00000373209 DNMBPQ6XZF7 1577 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms