RNA–Protein interactions for RNA: ENST00000606538.5

POLR2F-213, Transcript of RNA polymerase II subunit F, humanhuman

TSL 2 BASIC

Gene POLR2F, Length 760 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-213ENST00000606538 NISCHQ9Y2I1 1504 aa31.75■■■□□ 2.67
POLR2F-213ENST00000606538 AEBP2Q6ZN18 517 aaPredicted RBP30.08■■■□□ 2.41
POLR2F-213ENST00000606538 CHIC1Q5VXU3 224 aa28.89■■■□□ 2.22
POLR2F-213ENST00000606538 CCDC180Q9P1Z9 1646 aa28.11■■■□□ 2.09
POLR2F-213ENST00000606538 ABCC9O60706 1549 aa27.21■■□□□ 1.95
POLR2F-213ENST00000606538 ZCCHC6Q5VYS8 1495 aaKnown RBP26.51■■□□□ 1.83
POLR2F-213ENST00000606538 NACADO15069 1562 aa26.33■■□□□ 1.81
POLR2F-213ENST00000606538 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
POLR2F-213ENST00000606538 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
POLR2F-213ENST00000606538 DCAF1Q9Y4B6 1507 aa26.29■■□□□ 1.8
POLR2F-213ENST00000606538 RB1CC1Q8TDY2 1594 aa26.29■■□□□ 1.8
POLR2F-213ENST00000606538 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
POLR2F-213ENST00000606538 SENP3Q9H4L4 574 aaPredicted RBP25.73■■□□□ 1.71
POLR2F-213ENST00000606538 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
POLR2F-213ENST00000606538 BICRAQ9NZM4 1560 aa25.56■■□□□ 1.68
POLR2F-213ENST00000606538 PABPN1Q86U42 306 aaKnown RBP eCLIP25.47■■□□□ 1.67
POLR2F-213ENST00000606538 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
POLR2F-213ENST00000606538 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
POLR2F-213ENST00000606538 EIF4G1Q04637 1599 aaKnown RBP24.82■■□□□ 1.56
POLR2F-213ENST00000606538 DNAJC5BQ9UF47 199 aa24.78■■□□□ 1.56
POLR2F-213ENST00000606538 CECR2Q9BXF3 1484 aa24.73■■□□□ 1.55
POLR2F-213ENST00000606538 CC2D2AQ9P2K1 1620 aa24.65■■□□□ 1.54
POLR2F-213ENST00000606538 SMARCA4P51532 1647 aa24.59■■□□□ 1.53
POLR2F-213ENST00000606538 BAZ1AQ9NRL2 1556 aaPredicted RBP24.57■■□□□ 1.52
POLR2F-213ENST00000606538 MROH2BQ7Z745 1585 aa24.5■■□□□ 1.51
POLR2F-213ENST00000606538 ATAD2BQ9ULI0 1458 aa24.37■■□□□ 1.49
POLR2F-213ENST00000606538 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
POLR2F-213ENST00000606538 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
POLR2F-213ENST00000606538 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
POLR2F-213ENST00000606538 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
POLR2F-213ENST00000606538 WIZO95785 1651 aa24.27■■□□□ 1.48
POLR2F-213ENST00000606538 HMGXB3Q12766 1538 aa24.21■■□□□ 1.47
POLR2F-213ENST00000606538 BAZ1BQ9UIG0 1483 aaKnown RBP24.15■■□□□ 1.46
POLR2F-213ENST00000606538 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
POLR2F-213ENST00000606538 FOXD1Q16676 465 aa23.87■■□□□ 1.41
POLR2F-213ENST00000606538 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
POLR2F-213ENST00000606538 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
POLR2F-213ENST00000606538 NESP48681 1621 aa23.66■■□□□ 1.38
POLR2F-213ENST00000606538 LAMC3Q9Y6N6 1575 aa23.62■■□□□ 1.37
POLR2F-213ENST00000606538 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
POLR2F-213ENST00000606538 CFTRP13569 1480 aa23.54■■□□□ 1.36
POLR2F-213ENST00000606538 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
POLR2F-213ENST00000606538 KIF21AQ7Z4S6 1674 aa23.41■■□□□ 1.34
POLR2F-213ENST00000606538 PDS5BQ9NTI5 1447 aa23.41■■□□□ 1.34
POLR2F-213ENST00000606538 ERCC6Q03468 1493 aa23.37■■□□□ 1.33
POLR2F-213ENST00000606538 FANCD2Q9BXW9 1451 aa23.33■■□□□ 1.33
POLR2F-213ENST00000606538 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
POLR2F-213ENST00000606538 THOC2Q8NI27 1593 aaKnown RBP23.25■■□□□ 1.31
POLR2F-213ENST00000606538 PLPPR3Q6T4P5 718 aa23.24■■□□□ 1.31
POLR2F-213ENST00000606538 MRC2Q9UBG0 1479 aa23.17■■□□□ 1.3
POLR2F-213ENST00000606538 WDR62O43379 1518 aa23.12■■□□□ 1.29
POLR2F-213ENST00000606538 URB2Q14146 1524 aaKnown RBP23.12■■□□□ 1.29
POLR2F-213ENST00000606538 CUX2O14529 1486 aa23.06■■□□□ 1.28
POLR2F-213ENST00000606538 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
POLR2F-213ENST00000606538 DNMBPQ6XZF7 1577 aa23■■□□□ 1.27
POLR2F-213ENST00000606538 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
POLR2F-213ENST00000606538 CUX1P39880 1505 aa22.96■■□□□ 1.27
POLR2F-213ENST00000606538 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
POLR2F-213ENST00000606538 SYNJ1O43426 1573 aa22.85■■□□□ 1.25
POLR2F-213ENST00000606538 BIVM-ERCC5R4GMW8 1640 aa22.84■■□□□ 1.25
POLR2F-213ENST00000606538 POLA1P09884 1462 aaPredicted RBP22.83■■□□□ 1.25
POLR2F-213ENST00000606538 TOP2BQ02880 1626 aa22.82■■□□□ 1.24
POLR2F-213ENST00000606538 FGD5Q6ZNL6 1462 aa22.81■■□□□ 1.24
POLR2F-213ENST00000606538 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.24
POLR2F-213ENST00000606538 IFT140Q96RY7 1462 aa22.76■■□□□ 1.23
POLR2F-213ENST00000606538 RAD54L2Q9Y4B4 1467 aa22.73■■□□□ 1.23
POLR2F-213ENST00000606538 SOGA1O94964 1423 aa22.72■■□□□ 1.23
POLR2F-213ENST00000606538 ZNF608Q9ULD9 1512 aaPredicted RBP22.68■■□□□ 1.22
POLR2F-213ENST00000606538 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
POLR2F-213ENST00000606538 ABCA10Q8WWZ4 1543 aa22.61■■□□□ 1.21
POLR2F-213ENST00000606538 EIF4G3O43432 1585 aaKnown RBP22.59■■□□□ 1.21
POLR2F-213ENST00000606538 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.21e-6■■■■■ 34.6
POLR2F-213ENST00000606538 TDRD9Q8NDG6 1382 aaKnown RBP22.56■■□□□ 1.2
POLR2F-213ENST00000606538 ABCA5Q8WWZ7 1642 aa22.52■■□□□ 1.2
POLR2F-213ENST00000606538 TRIM41Q8WV44 630 aa22.48■■□□□ 1.19
POLR2F-213ENST00000606538 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
POLR2F-213ENST00000606538 PPP6R1Q9UPN7 881 aa22.46■■□□□ 1.19
POLR2F-213ENST00000606538 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
POLR2F-213ENST00000606538 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
POLR2F-213ENST00000606538 ADRA2BP18089 450 aa22.41■■□□□ 1.18
POLR2F-213ENST00000606538 PIAS4Q8N2W9 510 aaPredicted RBP22.38■■□□□ 1.17
POLR2F-213ENST00000606538 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
POLR2F-213ENST00000606538 KIF27Q86VH2 1401 aa22.35■■□□□ 1.17
POLR2F-213ENST00000606538 MSH5O43196 834 aa22.34■■□□□ 1.17
POLR2F-213ENST00000606538 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
POLR2F-213ENST00000606538 MAGI1Q96QZ7 1491 aaPredicted RBP22.33■■□□□ 1.16
POLR2F-213ENST00000606538 RUSC2Q8N2Y8 1516 aa22.32■■□□□ 1.16
POLR2F-213ENST00000606538 CHD1O14646 1710 aa22.28■■□□□ 1.16
POLR2F-213ENST00000606538 IGF1RP08069 1367 aa22.27■■□□□ 1.16
POLR2F-213ENST00000606538 ADAMTS12P58397 1594 aa22.27■■□□□ 1.16
POLR2F-213ENST00000606538 SYNJ2O15056 1496 aa22.24■■□□□ 1.15
POLR2F-213ENST00000606538 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
POLR2F-213ENST00000606538 CUL7Q14999 1698 aa22.18■■□□□ 1.14
POLR2F-213ENST00000606538 FBLN2P98095 1184 aa22.17■■□□□ 1.14
POLR2F-213ENST00000606538 CHMP7Q8WUX9 453 aaPredicted RBP22.16■■□□□ 1.14
POLR2F-213ENST00000606538 OSCARQ8IYS5 282 aa22.14■■□□□ 1.13
POLR2F-213ENST00000606538 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
POLR2F-213ENST00000606538 CARMIL1Q5VZK9 1371 aa22.12■■□□□ 1.13
POLR2F-213ENST00000606538 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
POLR2F-213ENST00000606538 EEA1Q15075 1411 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms