RNA–Protein interactions for RNA: ENST00000595564.5

PAF1-204, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PAF1, Length 1,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-204ENST00000595564 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
PAF1-204ENST00000595564 CCDC180Q9P1Z9 1646 aa28.06■■■□□ 2.08
PAF1-204ENST00000595564 ZCCHC6Q5VYS8 1495 aaKnown RBP27.23■■□□□ 1.95
PAF1-204ENST00000595564 DCAF8L2P0C7V8 631 aa26.81■■□□□ 1.88
PAF1-204ENST00000595564 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
PAF1-204ENST00000595564 SHROOM4Q9ULL8 1493 aa26.7■■□□□ 1.86
PAF1-204ENST00000595564 ABCC9O60706 1549 aa26.49■■□□□ 1.83
PAF1-204ENST00000595564 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
PAF1-204ENST00000595564 NACADO15069 1562 aa26.11■■□□□ 1.77
PAF1-204ENST00000595564 SCRIBQ14160 1630 aa25.94■■□□□ 1.74
PAF1-204ENST00000595564 RB1CC1Q8TDY2 1594 aa25.85■■□□□ 1.73
PAF1-204ENST00000595564 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
PAF1-204ENST00000595564 UNC13AQ9UPW8 1703 aa25.33■■□□□ 1.65
PAF1-204ENST00000595564 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
PAF1-204ENST00000595564 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
PAF1-204ENST00000595564 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
PAF1-204ENST00000595564 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
PAF1-204ENST00000595564 PABPN1Q86U42 306 aaKnown RBP eCLIP25.03■■□□□ 1.6
PAF1-204ENST00000595564 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
PAF1-204ENST00000595564 WIZO95785 1651 aa24.86■■□□□ 1.57
PAF1-204ENST00000595564 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
PAF1-204ENST00000595564 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
PAF1-204ENST00000595564 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
PAF1-204ENST00000595564 PEG3Q9GZU2 1588 aa24.48■■□□□ 1.51
PAF1-204ENST00000595564 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
PAF1-204ENST00000595564 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
PAF1-204ENST00000595564 SMARCA2P51531 1590 aa24.36■■□□□ 1.49
PAF1-204ENST00000595564 CCDC88BA6NC98 1476 aa24.36■■□□□ 1.49
PAF1-204ENST00000595564 EIF4G1Q04637 1599 aaKnown RBP24.31■■□□□ 1.48
PAF1-204ENST00000595564 BAZ1BQ9UIG0 1483 aaKnown RBP24.27■■□□□ 1.48
PAF1-204ENST00000595564 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
PAF1-204ENST00000595564 NCAPD3P42695 1498 aa24.11■■□□□ 1.45
PAF1-204ENST00000595564 HMGXB3Q12766 1538 aa24.08■■□□□ 1.44
PAF1-204ENST00000595564 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
PAF1-204ENST00000595564 ABCC8Q09428 1581 aa23.95■■□□□ 1.42
PAF1-204ENST00000595564 LOC105371045A0A1W2PR82 267 aa23.88■■□□□ 1.41
PAF1-204ENST00000595564 FAM9AQ8IZU1 332 aaPredicted RBP23.83■■□□□ 1.41
PAF1-204ENST00000595564 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
PAF1-204ENST00000595564 CFTRP13569 1480 aa23.65■■□□□ 1.38
PAF1-204ENST00000595564 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
PAF1-204ENST00000595564 SOGA1O94964 1423 aa23.55■■□□□ 1.36
PAF1-204ENST00000595564 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
PAF1-204ENST00000595564 CADPSQ9ULU8 1353 aa23.54■■□□□ 1.36
PAF1-204ENST00000595564 PRDM2Q13029 1718 aa23.5■■□□□ 1.35
PAF1-204ENST00000595564 TOP2BQ02880 1626 aa23.49■■□□□ 1.35
PAF1-204ENST00000595564 EEA1Q15075 1411 aa23.48■■□□□ 1.35
PAF1-204ENST00000595564 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
PAF1-204ENST00000595564 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.34
PAF1-204ENST00000595564 CUX1P39880 1505 aa23.4■■□□□ 1.34
PAF1-204ENST00000595564 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.33
PAF1-204ENST00000595564 NESP48681 1621 aa23.29■■□□□ 1.32
PAF1-204ENST00000595564 FANCD2Q9BXW9 1451 aa23.29■■□□□ 1.32
PAF1-204ENST00000595564 LAMC3Q9Y6N6 1575 aa23.24■■□□□ 1.31
PAF1-204ENST00000595564 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
PAF1-204ENST00000595564 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
PAF1-204ENST00000595564 TNIKQ9UKE5 1360 aa23.17■■□□□ 1.3
PAF1-204ENST00000595564 KIF21BO75037 1637 aa23.17■■□□□ 1.3
PAF1-204ENST00000595564 UBTFP17480 764 aaKnown RBP23.16■■□□□ 1.3
PAF1-204ENST00000595564 FGD5Q6ZNL6 1462 aa23.12■■□□□ 1.29
PAF1-204ENST00000595564 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
PAF1-204ENST00000595564 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
PAF1-204ENST00000595564 CEP162Q5TB80 1403 aa23.09■■□□□ 1.29
PAF1-204ENST00000595564 PDS5BQ9NTI5 1447 aa23.08■■□□□ 1.29
PAF1-204ENST00000595564 TOPBP1Q92547 1522 aa23.05■■□□□ 1.28
PAF1-204ENST00000595564 RAPGEF2Q9Y4G8 1499 aa23.05■■□□□ 1.28
PAF1-204ENST00000595564 PCGF6Q9BYE7 350 aa23.03■■□□□ 1.28
PAF1-204ENST00000595564 CUX2O14529 1486 aa23.03■■□□□ 1.28
PAF1-204ENST00000595564 PRXQ9BXM0 1461 aa23■■□□□ 1.27
PAF1-204ENST00000595564 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
PAF1-204ENST00000595564 KIF21AQ7Z4S6 1674 aa22.97■■□□□ 1.27
PAF1-204ENST00000595564 ERICH3Q5RHP9 1530 aa22.97■■□□□ 1.27
PAF1-204ENST00000595564 POLA1P09884 1462 aaPredicted RBP22.96■■□□□ 1.27
PAF1-204ENST00000595564 RAD54L2Q9Y4B4 1467 aa22.93■■□□□ 1.26
PAF1-204ENST00000595564 TRIM26Q12899 539 aaPredicted RBP22.93■■□□□ 1.26
PAF1-204ENST00000595564 IGF1RP08069 1367 aa22.89■■□□□ 1.26
PAF1-204ENST00000595564 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
PAF1-204ENST00000595564 CLIP1P30622 1438 aa22.87■■□□□ 1.25
PAF1-204ENST00000595564 CARMIL1Q5VZK9 1371 aa22.79■■□□□ 1.24
PAF1-204ENST00000595564 PPARGC1BQ86YN6 1023 aaKnown RBP22.79■■□□□ 1.24
PAF1-204ENST00000595564 RANGAP1P46060 587 aaPredicted RBP22.78■■□□□ 1.24
PAF1-204ENST00000595564 MRC2Q9UBG0 1479 aa22.78■■□□□ 1.24
PAF1-204ENST00000595564 ERCC6Q03468 1493 aa22.77■■□□□ 1.24
PAF1-204ENST00000595564 WDR97A6NE52 1622 aa22.77■■□□□ 1.24
PAF1-204ENST00000595564 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
PAF1-204ENST00000595564 VPS8Q8N3P4 1428 aa22.68■■□□□ 1.22
PAF1-204ENST00000595564 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
PAF1-204ENST00000595564 TARBP1Q13395 1621 aaKnown RBP22.67■■□□□ 1.22
PAF1-204ENST00000595564 CUL7Q14999 1698 aa22.65■■□□□ 1.22
PAF1-204ENST00000595564 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
PAF1-204ENST00000595564 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
PAF1-204ENST00000595564 WDR62O43379 1518 aa22.63■■□□□ 1.21
PAF1-204ENST00000595564 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
PAF1-204ENST00000595564 TTBK1Q5TCY1 1321 aaPredicted RBP22.58■■□□□ 1.21
PAF1-204ENST00000595564 ARHGAP35Q9NRY4 1499 aa22.55■■□□□ 1.2
PAF1-204ENST00000595564 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
PAF1-204ENST00000595564 HRCP23327 699 aa22.52■■□□□ 1.2
PAF1-204ENST00000595564 APLP2Q06481 763 aa22.51■■□□□ 1.19
PAF1-204ENST00000595564 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.192e-8■■■■■ 39.4
PAF1-204ENST00000595564 PBRM1Q86U86 1689 aa22.48■■□□□ 1.19
PAF1-204ENST00000595564 CTTNBP2Q8WZ74 1663 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms