Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBB4AP04350 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBB4AP04350 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TUBB4AP04350 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TUBB4AP04350 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBB4AP04350 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.47■□□□□ 0.07
TUBB4AP04350 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.47■□□□□ 0.07
TUBB4AP04350 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.47■□□□□ 0.07
TUBB4AP04350 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.47■□□□□ 0.07
TUBB4AP04350 AC110048.1-201ENST00000604293 2157 ntBASIC15.47■□□□□ 0.07
TUBB4AP04350 LINC02084-201ENST00000606069 1096 ntBASIC15.47■□□□□ 0.07
TUBB4AP04350 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.47■□□□□ 0.07
TUBB4AP04350 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC15.47■□□□□ 0.07
TUBB4AP04350 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC15.47■□□□□ 0.07
TUBB4AP04350 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TUBB4AP04350 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TUBB4AP04350 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 AC061965.1-201ENST00000560524 1465 ntBASIC15.46■□□□□ 0.07
TUBB4AP04350 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TUBB4AP04350 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 SHC1P1-201ENST00000425230 1745 ntBASIC15.46■□□□□ 0.07
TUBB4AP04350 AP003969.2-201ENST00000623739 2275 ntBASIC15.46■□□□□ 0.07
TUBB4AP04350 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBB4AP04350 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TUBB4AP04350 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.46■□□□□ 0.07
TUBB4AP04350 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBB4AP04350 PUDPP3-201ENST00000445368 636 ntBASIC15.46■□□□□ 0.07
TUBB4AP04350 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TUBB4AP04350 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
TUBB4AP04350 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TUBB4AP04350 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.46■□□□□ 0.07
TUBB4AP04350 AC138696.2-201ENST00000607376 223 ntBASIC15.46■□□□□ 0.07
TUBB4AP04350 AP001059.3-201ENST00000619053 235 ntBASIC15.46■□□□□ 0.07
TUBB4AP04350 SALL4P6-201ENST00000429385 1691 ntBASIC15.46■□□□□ 0.07
TUBB4AP04350 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
TUBB4AP04350 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC15.46■□□□□ 0.07
TUBB4AP04350 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.46■□□□□ 0.07
TUBB4AP04350 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TUBB4AP04350 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TUBB4AP04350 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC15.45■□□□□ 0.06
TUBB4AP04350 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBB4AP04350 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 AP001972.5-201ENST00000624624 2338 ntBASIC15.45■□□□□ 0.06
TUBB4AP04350 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TUBB4AP04350 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TUBB4AP04350 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC15.45■□□□□ 0.06
TUBB4AP04350 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TUBB4AP04350 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.45■□□□□ 0.06
TUBB4AP04350 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TUBB4AP04350 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
TUBB4AP04350 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TUBB4AP04350 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.45■□□□□ 0.06
TUBB4AP04350 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.45■□□□□ 0.06
TUBB4AP04350 CNN2P11-201ENST00000429351 262 ntBASIC15.45■□□□□ 0.06
TUBB4AP04350 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC15.45■□□□□ 0.06
TUBB4AP04350 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.45■□□□□ 0.06
TUBB4AP04350 INE1-201ENST00000456273 945 ntBASIC15.45■□□□□ 0.06
TUBB4AP04350 KRT18P15-201ENST00000458108 1291 ntBASIC15.45■□□□□ 0.06
TUBB4AP04350 FAM86LP-201ENST00000478302 853 ntBASIC15.45■□□□□ 0.06
TUBB4AP04350 HLA-J-203ENST00000494367 1087 ntBASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms