RNA–Protein interactions for RNA: ENST00000554614.2

AC004846.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC004846.1, Length 3,050 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004846.1-201ENST00000554614 NISCHQ9Y2I1 1504 aa26.21■■□□□ 1.79
AC004846.1-201ENST00000554614 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
AC004846.1-201ENST00000554614 SUPT5HO00267 1087 aaKnown RBP23.09■■□□□ 1.29
AC004846.1-201ENST00000554614 PPARGC1BQ86YN6 1023 aaKnown RBP22.83■■□□□ 1.24
AC004846.1-201ENST00000554614 HRCP23327 699 aa22.82■■□□□ 1.24
AC004846.1-201ENST00000554614 PCGF6Q9BYE7 350 aa22.78■■□□□ 1.24
AC004846.1-201ENST00000554614 CCDC180Q9P1Z9 1646 aa22.41■■□□□ 1.18
AC004846.1-201ENST00000554614 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
AC004846.1-201ENST00000554614 CHIC1Q5VXU3 224 aa22.26■■□□□ 1.15
AC004846.1-201ENST00000554614 DCAF8L2P0C7V8 631 aa22.1■■□□□ 1.13
AC004846.1-201ENST00000554614 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
AC004846.1-201ENST00000554614 ZCCHC6Q5VYS8 1495 aaKnown RBP22.07■■□□□ 1.12
AC004846.1-201ENST00000554614 EHMT2Q96KQ7 1210 aa21.76■■□□□ 1.07
AC004846.1-201ENST00000554614 SCAF1Q9H7N4 1312 aaKnown RBP21.72■■□□□ 1.07
AC004846.1-201ENST00000554614 TRIM26Q12899 539 aaPredicted RBP21.67■■□□□ 1.06
AC004846.1-201ENST00000554614 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
AC004846.1-201ENST00000554614 FAM9AQ8IZU1 332 aaPredicted RBP21.51■■□□□ 1.03
AC004846.1-201ENST00000554614 DCAF1Q9Y4B6 1507 aa21.46■■□□□ 1.03
AC004846.1-201ENST00000554614 ZEB1P37275 1124 aaPredicted RBP21.31■■□□□ 1
AC004846.1-201ENST00000554614 ABCC9O60706 1549 aa21.29■■□□□ 1
AC004846.1-201ENST00000554614 NEUROD1Q13562 356 aa21.21■□□□□ 0.99
AC004846.1-201ENST00000554614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
AC004846.1-201ENST00000554614 TTBK1Q5TCY1 1321 aaPredicted RBP21.15■□□□□ 0.98
AC004846.1-201ENST00000554614 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
AC004846.1-201ENST00000554614 ACIN1Q9UKV3 1341 aaKnown RBP21.1■□□□□ 0.97
AC004846.1-201ENST00000554614 TRIM41Q8WV44 630 aa21.1■□□□□ 0.97
AC004846.1-201ENST00000554614 CCER1Q8TC90 406 aaPredicted RBP21.03■□□□□ 0.96
AC004846.1-201ENST00000554614 SCRIBQ14160 1630 aa21.02■□□□□ 0.96
AC004846.1-201ENST00000554614 YTHDC1Q96MU7 727 aaKnown RBP20.98■□□□□ 0.95
AC004846.1-201ENST00000554614 DIEXFQ68CQ4 756 aaKnown RBP20.9■□□□□ 0.94
AC004846.1-201ENST00000554614 NACADO15069 1562 aa20.88■□□□□ 0.93
AC004846.1-201ENST00000554614 CENPBP07199 599 aaPredicted RBP20.87■□□□□ 0.93
AC004846.1-201ENST00000554614 MYT1Q01538 1121 aa20.66■□□□□ 0.9
AC004846.1-201ENST00000554614 RB1CC1Q8TDY2 1594 aa20.64■□□□□ 0.9
AC004846.1-201ENST00000554614 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
AC004846.1-201ENST00000554614 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
AC004846.1-201ENST00000554614 MIER1Q8N108 512 aa20.42■□□□□ 0.86
AC004846.1-201ENST00000554614 ZNF316A6NFI3 1004 aaPredicted RBP20.38■□□□□ 0.85
AC004846.1-201ENST00000554614 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
AC004846.1-201ENST00000554614 PABPN1Q86U42 306 aaKnown RBP eCLIP20.32■□□□□ 0.84
AC004846.1-201ENST00000554614 HNRNPUL2Q1KMD3 747 aaKnown RBP20.31■□□□□ 0.84
AC004846.1-201ENST00000554614 UNC13AQ9UPW8 1703 aa20.26■□□□□ 0.83
AC004846.1-201ENST00000554614 WIZO95785 1651 aa20.22■□□□□ 0.83
AC004846.1-201ENST00000554614 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
AC004846.1-201ENST00000554614 RANGAP1P46060 587 aaPredicted RBP20.16■□□□□ 0.82
AC004846.1-201ENST00000554614 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
AC004846.1-201ENST00000554614 BICRAQ9NZM4 1560 aa20.1■□□□□ 0.81
AC004846.1-201ENST00000554614 SMARCA4P51532 1647 aa20.03■□□□□ 0.8
AC004846.1-201ENST00000554614 BCANQ96GW7 911 aa20.03■□□□□ 0.8
AC004846.1-201ENST00000554614 SUPT16HQ9Y5B9 1047 aaKnown RBP19.98■□□□□ 0.79
AC004846.1-201ENST00000554614 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
AC004846.1-201ENST00000554614 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
AC004846.1-201ENST00000554614 TSHZ2Q9NRE2 1034 aa19.87■□□□□ 0.77
AC004846.1-201ENST00000554614 BCL11AQ9H165 835 aa19.87■□□□□ 0.77
AC004846.1-201ENST00000554614 SLC24A1O60721 1099 aa19.85■□□□□ 0.77
AC004846.1-201ENST00000554614 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
AC004846.1-201ENST00000554614 ANP32EQ9BTT0 268 aa19.82■□□□□ 0.76
AC004846.1-201ENST00000554614 SOGA1O94964 1423 aa19.81■□□□□ 0.76
AC004846.1-201ENST00000554614 CSRNP3Q8WYN3 585 aa19.8■□□□□ 0.76
AC004846.1-201ENST00000554614 KCNH8Q96L42 1107 aa19.78■□□□□ 0.76
AC004846.1-201ENST00000554614 APLP2Q06481 763 aa19.77■□□□□ 0.76
AC004846.1-201ENST00000554614 SMARCA2P51531 1590 aa19.76■□□□□ 0.75
AC004846.1-201ENST00000554614 ABCC8Q09428 1581 aa19.76■□□□□ 0.75
AC004846.1-201ENST00000554614 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
AC004846.1-201ENST00000554614 EIF4G1Q04637 1599 aaKnown RBP19.69■□□□□ 0.74
AC004846.1-201ENST00000554614 ITGAEP38570 1179 aa19.68■□□□□ 0.74
AC004846.1-201ENST00000554614 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
AC004846.1-201ENST00000554614 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
AC004846.1-201ENST00000554614 FKBP8Q14318 412 aa19.65■□□□□ 0.74
AC004846.1-201ENST00000554614 PEG3Q9GZU2 1588 aa19.65■□□□□ 0.74
AC004846.1-201ENST00000554614 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.73
AC004846.1-201ENST00000554614 BAZ1BQ9UIG0 1483 aaKnown RBP19.6■□□□□ 0.73
AC004846.1-201ENST00000554614 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
AC004846.1-201ENST00000554614 TRIM52Q96A61 297 aa19.49■□□□□ 0.71
AC004846.1-201ENST00000554614 DDX10Q13206 875 aaKnown RBP19.46■□□□□ 0.71
AC004846.1-201ENST00000554614 RBM19Q9Y4C8 960 aaKnown RBP19.45■□□□□ 0.7
AC004846.1-201ENST00000554614 CLIP1P30622 1438 aa19.43■□□□□ 0.7
AC004846.1-201ENST00000554614 CLSPNQ9HAW4 1339 aa19.42■□□□□ 0.7
AC004846.1-201ENST00000554614 NEFLP07196 543 aa19.42■□□□□ 0.7
AC004846.1-201ENST00000554614 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
AC004846.1-201ENST00000554614 IRX6P78412 446 aaPredicted RBP19.38■□□□□ 0.69
AC004846.1-201ENST00000554614 DHX57Q6P158 1386 aaKnown RBP19.37■□□□□ 0.69
AC004846.1-201ENST00000554614 NCAPD3P42695 1498 aa19.36■□□□□ 0.69
AC004846.1-201ENST00000554614 KANK4Q5T7N3 995 aaPredicted RBP19.35■□□□□ 0.69
AC004846.1-201ENST00000554614 ERICH6Q7L0X2 663 aa19.31■□□□□ 0.68
AC004846.1-201ENST00000554614 HMGXB3Q12766 1538 aa19.27■□□□□ 0.68
AC004846.1-201ENST00000554614 MSH5O43196 834 aa19.27■□□□□ 0.68
AC004846.1-201ENST00000554614 SYNJ1O43426 1573 aa19.26■□□□□ 0.67
AC004846.1-201ENST00000554614 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
AC004846.1-201ENST00000554614 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
AC004846.1-201ENST00000554614 EEA1Q15075 1411 aa19.2■□□□□ 0.66
AC004846.1-201ENST00000554614 RAPGEF2Q9Y4G8 1499 aa19.17■□□□□ 0.66
AC004846.1-201ENST00000554614 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
AC004846.1-201ENST00000554614 ATP1B4Q9UN42 357 aaPredicted RBP19.13■□□□□ 0.65
AC004846.1-201ENST00000554614 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
AC004846.1-201ENST00000554614 ANP32CO43423 234 aa19.1■□□□□ 0.65
AC004846.1-201ENST00000554614 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
AC004846.1-201ENST00000554614 CFTRP13569 1480 aa19.08■□□□□ 0.65
AC004846.1-201ENST00000554614 PRKCSHP14314 528 aaPredicted RBP19.06■□□□□ 0.64
AC004846.1-201ENST00000554614 HNRNPUQ00839 825 aaKnown RBP eCLIP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms