RNA–Protein interactions for RNA: ENST00000425230.2

SHC1P1-201, Transcript of SHC adaptor protein 1 pseudogene 1, humanhuman

BASIC

Gene SHC1P1, Length 1,745 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P1-201ENST00000425230 NISCHQ9Y2I1 1504 aa35.43■■■■□ 3.26
SHC1P1-201ENST00000425230 CCDC180Q9P1Z9 1646 aa31.4■■■□□ 2.62
SHC1P1-201ENST00000425230 ABCC9O60706 1549 aa30.45■■■□□ 2.46
SHC1P1-201ENST00000425230 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
SHC1P1-201ENST00000425230 DCAF8L2P0C7V8 631 aa29.51■■■□□ 2.31
SHC1P1-201ENST00000425230 NACADO15069 1562 aa29.46■■■□□ 2.31
SHC1P1-201ENST00000425230 RB1CC1Q8TDY2 1594 aa29.42■■■□□ 2.3
SHC1P1-201ENST00000425230 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
SHC1P1-201ENST00000425230 DCAF1Q9Y4B6 1507 aa29.33■■■□□ 2.29
SHC1P1-201ENST00000425230 UNC13AQ9UPW8 1703 aa28.77■■■□□ 2.2
SHC1P1-201ENST00000425230 SCRIBQ14160 1630 aa28.66■■■□□ 2.18
SHC1P1-201ENST00000425230 BICRAQ9NZM4 1560 aa28.51■■■□□ 2.15
SHC1P1-201ENST00000425230 PABPN1Q86U42 306 aaKnown RBP eCLIP28.49■■■□□ 2.15
SHC1P1-201ENST00000425230 SHROOM4Q9ULL8 1493 aa28.24■■■□□ 2.11
SHC1P1-201ENST00000425230 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
SHC1P1-201ENST00000425230 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
SHC1P1-201ENST00000425230 CC2D2AQ9P2K1 1620 aa27.56■■■□□ 2
SHC1P1-201ENST00000425230 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
SHC1P1-201ENST00000425230 BAZ1AQ9NRL2 1556 aaPredicted RBP27.46■■□□□ 1.99
SHC1P1-201ENST00000425230 SMARCA4P51532 1647 aa27.45■■□□□ 1.98
SHC1P1-201ENST00000425230 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
SHC1P1-201ENST00000425230 ATAD2BQ9ULI0 1458 aa27.22■■□□□ 1.95
SHC1P1-201ENST00000425230 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
SHC1P1-201ENST00000425230 PEG3Q9GZU2 1588 aa27.17■■□□□ 1.94
SHC1P1-201ENST00000425230 NCAPD3P42695 1498 aa27.17■■□□□ 1.94
SHC1P1-201ENST00000425230 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
SHC1P1-201ENST00000425230 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
SHC1P1-201ENST00000425230 WIZO95785 1651 aa27.05■■□□□ 1.92
SHC1P1-201ENST00000425230 BAZ1BQ9UIG0 1483 aaKnown RBP27.02■■□□□ 1.92
SHC1P1-201ENST00000425230 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
SHC1P1-201ENST00000425230 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
SHC1P1-201ENST00000425230 CCDC88BA6NC98 1476 aa26.44■■□□□ 1.82
SHC1P1-201ENST00000425230 LAMC3Q9Y6N6 1575 aa26.42■■□□□ 1.82
SHC1P1-201ENST00000425230 NESP48681 1621 aa26.42■■□□□ 1.82
SHC1P1-201ENST00000425230 CADPSQ9ULU8 1353 aa26.39■■□□□ 1.81
SHC1P1-201ENST00000425230 CFTRP13569 1480 aa26.29■■□□□ 1.8
SHC1P1-201ENST00000425230 ERCC6Q03468 1493 aa26.23■■□□□ 1.79
SHC1P1-201ENST00000425230 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
SHC1P1-201ENST00000425230 PRDM2Q13029 1718 aa26.15■■□□□ 1.78
SHC1P1-201ENST00000425230 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
SHC1P1-201ENST00000425230 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
SHC1P1-201ENST00000425230 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
SHC1P1-201ENST00000425230 THOC2Q8NI27 1593 aaKnown RBP25.97■■□□□ 1.75
SHC1P1-201ENST00000425230 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
SHC1P1-201ENST00000425230 CUX2O14529 1486 aa25.86■■□□□ 1.73
SHC1P1-201ENST00000425230 WDR62O43379 1518 aa25.84■■□□□ 1.73
SHC1P1-201ENST00000425230 URB2Q14146 1524 aaKnown RBP25.8■■□□□ 1.72
SHC1P1-201ENST00000425230 ABCC8Q09428 1581 aa25.73■■□□□ 1.71
SHC1P1-201ENST00000425230 TOPBP1Q92547 1522 aa25.7■■□□□ 1.7
SHC1P1-201ENST00000425230 DNMBPQ6XZF7 1577 aa25.7■■□□□ 1.7
SHC1P1-201ENST00000425230 CUX1P39880 1505 aa25.6■■□□□ 1.69
SHC1P1-201ENST00000425230 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
SHC1P1-201ENST00000425230 POLA1P09884 1462 aaPredicted RBP25.51■■□□□ 1.67
SHC1P1-201ENST00000425230 FGD5Q6ZNL6 1462 aa25.48■■□□□ 1.67
SHC1P1-201ENST00000425230 IFT140Q96RY7 1462 aa25.47■■□□□ 1.67
SHC1P1-201ENST00000425230 TOP2BQ02880 1626 aa25.47■■□□□ 1.67
SHC1P1-201ENST00000425230 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
SHC1P1-201ENST00000425230 BIVM-ERCC5R4GMW8 1640 aa25.46■■□□□ 1.67
SHC1P1-201ENST00000425230 SOGA1O94964 1423 aa25.41■■□□□ 1.66
SHC1P1-201ENST00000425230 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
SHC1P1-201ENST00000425230 RAD54L2Q9Y4B4 1467 aa25.38■■□□□ 1.65
SHC1P1-201ENST00000425230 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
SHC1P1-201ENST00000425230 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
SHC1P1-201ENST00000425230 EIF4G3O43432 1585 aaKnown RBP25.26■■□□□ 1.63
SHC1P1-201ENST00000425230 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
SHC1P1-201ENST00000425230 AQRO60306 1485 aaKnown RBP eCLIP25.22■■□□□ 1.63
SHC1P1-201ENST00000425230 TDRD9Q8NDG6 1382 aaKnown RBP25.22■■□□□ 1.63
SHC1P1-201ENST00000425230 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
SHC1P1-201ENST00000425230 ABCA5Q8WWZ7 1642 aa25.13■■□□□ 1.61
SHC1P1-201ENST00000425230 GAPVD1Q14C86 1478 aa25.12■■□□□ 1.61
SHC1P1-201ENST00000425230 GRIN2BQ13224 1484 aa25.08■■□□□ 1.6
SHC1P1-201ENST00000425230 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
SHC1P1-201ENST00000425230 KIF27Q86VH2 1401 aa25■■□□□ 1.59
SHC1P1-201ENST00000425230 SNAPC4Q5SXM2 1469 aa25■■□□□ 1.59
SHC1P1-201ENST00000425230 CHIC1Q5VXU3 224 aa24.99■■□□□ 1.59
SHC1P1-201ENST00000425230 MAGI1Q96QZ7 1491 aaPredicted RBP24.99■■□□□ 1.59
SHC1P1-201ENST00000425230 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
SHC1P1-201ENST00000425230 CHD1O14646 1710 aa24.89■■□□□ 1.58
SHC1P1-201ENST00000425230 SYNJ2O15056 1496 aa24.89■■□□□ 1.57
SHC1P1-201ENST00000425230 FBLN2P98095 1184 aa24.88■■□□□ 1.57
SHC1P1-201ENST00000425230 ADAMTS12P58397 1594 aa24.87■■□□□ 1.57
SHC1P1-201ENST00000425230 CHMP7Q8WUX9 453 aaPredicted RBP24.86■■□□□ 1.57
SHC1P1-201ENST00000425230 IGF1RP08069 1367 aa24.84■■□□□ 1.57
SHC1P1-201ENST00000425230 OSCARQ8IYS5 282 aa24.84■■□□□ 1.57
SHC1P1-201ENST00000425230 FHAD1B1AJZ9 1412 aa24.84■■□□□ 1.57
SHC1P1-201ENST00000425230 RUSC2Q8N2Y8 1516 aa24.84■■□□□ 1.57
SHC1P1-201ENST00000425230 CUL7Q14999 1698 aa24.79■■□□□ 1.56
SHC1P1-201ENST00000425230 GRIN2AQ12879 1464 aa24.76■■□□□ 1.55
SHC1P1-201ENST00000425230 DNAJC5Q9H3Z4 198 aa24.75■■□□□ 1.55
SHC1P1-201ENST00000425230 CARMIL1Q5VZK9 1371 aa24.71■■□□□ 1.55
SHC1P1-201ENST00000425230 EEA1Q15075 1411 aa24.71■■□□□ 1.55
SHC1P1-201ENST00000425230 NUP160Q12769 1436 aa24.63■■□□□ 1.53
SHC1P1-201ENST00000425230 CSRNP3Q8WYN3 585 aa24.63■■□□□ 1.53
SHC1P1-201ENST00000425230 CEP170Q5SW79 1584 aa24.62■■□□□ 1.53
SHC1P1-201ENST00000425230 CLASP1Q7Z460 1538 aa24.61■■□□□ 1.53
SHC1P1-201ENST00000425230 FAM9AQ8IZU1 332 aaPredicted RBP24.61■■□□□ 1.53
SHC1P1-201ENST00000425230 RAPGEF2Q9Y4G8 1499 aa24.6■■□□□ 1.53
SHC1P1-201ENST00000425230 PRXQ9BXM0 1461 aa24.58■■□□□ 1.53
SHC1P1-201ENST00000425230 KIAA0586Q9BVV6 1533 aa24.47■■□□□ 1.51
SHC1P1-201ENST00000425230 ARHGEF11O15085 1522 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms