RNA–Protein interactions for RNA: ENST00000636421.1

AC004147.4-201, humanhuman

TSL 5 BASIC

Gene AC004147.4, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004147.4-201ENST00000636421 NISCHQ9Y2I1 1504 aa28.91■■■□□ 2.22
AC004147.4-201ENST00000636421 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
AC004147.4-201ENST00000636421 ZCCHC6Q5VYS8 1495 aaKnown RBP24.44■■□□□ 1.5
AC004147.4-201ENST00000636421 SHROOM4Q9ULL8 1493 aa24.07■■□□□ 1.44
AC004147.4-201ENST00000636421 DCAF1Q9Y4B6 1507 aa23.91■■□□□ 1.42
AC004147.4-201ENST00000636421 DCAF8L2P0C7V8 631 aa23.53■■□□□ 1.36
AC004147.4-201ENST00000636421 SUPT5HO00267 1087 aaKnown RBP23.52■■□□□ 1.36
AC004147.4-201ENST00000636421 MYO15BQ96JP2 1530 aa23.35■■□□□ 1.33
AC004147.4-201ENST00000636421 ABCC9O60706 1549 aa23.01■■□□□ 1.27
AC004147.4-201ENST00000636421 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
AC004147.4-201ENST00000636421 NACADO15069 1562 aa22.94■■□□□ 1.26
AC004147.4-201ENST00000636421 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
AC004147.4-201ENST00000636421 RSF1Q96T23 1441 aaPredicted RBP22.73■■□□□ 1.23
AC004147.4-201ENST00000636421 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
AC004147.4-201ENST00000636421 CECR2Q9BXF3 1484 aa22.42■■□□□ 1.18
AC004147.4-201ENST00000636421 MROH2BQ7Z745 1585 aa22.38■■□□□ 1.17
AC004147.4-201ENST00000636421 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
AC004147.4-201ENST00000636421 WIZO95785 1651 aa22.21■■□□□ 1.15
AC004147.4-201ENST00000636421 UNC13AQ9UPW8 1703 aa22.17■■□□□ 1.14
AC004147.4-201ENST00000636421 LOC105371045A0A1W2PR82 267 aa22.13■■□□□ 1.13
AC004147.4-201ENST00000636421 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
AC004147.4-201ENST00000636421 SMARCA4P51532 1647 aa22.05■■□□□ 1.12
AC004147.4-201ENST00000636421 EIF4G1Q04637 1599 aaKnown RBP22.01■■□□□ 1.11
AC004147.4-201ENST00000636421 TOP2AP11388 1531 aaKnown RBP22■■□□□ 1.11
AC004147.4-201ENST00000636421 BICRAQ9NZM4 1560 aa21.94■■□□□ 1.1
AC004147.4-201ENST00000636421 HRCP23327 699 aa21.91■■□□□ 1.1
AC004147.4-201ENST00000636421 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
AC004147.4-201ENST00000636421 SMARCA2P51531 1590 aa21.83■■□□□ 1.09
AC004147.4-201ENST00000636421 CCDC88BA6NC98 1476 aa21.81■■□□□ 1.08
AC004147.4-201ENST00000636421 PEG3Q9GZU2 1588 aa21.77■■□□□ 1.08
AC004147.4-201ENST00000636421 TRIM26Q12899 539 aaPredicted RBP21.69■■□□□ 1.06
AC004147.4-201ENST00000636421 FAM9AQ8IZU1 332 aaPredicted RBP21.67■■□□□ 1.06
AC004147.4-201ENST00000636421 PABPN1Q86U42 306 aaKnown RBP eCLIP21.66■■□□□ 1.06
AC004147.4-201ENST00000636421 ABCC8Q09428 1581 aa21.57■■□□□ 1.04
AC004147.4-201ENST00000636421 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
AC004147.4-201ENST00000636421 EEA1Q15075 1411 aa21.43■■□□□ 1.02
AC004147.4-201ENST00000636421 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
AC004147.4-201ENST00000636421 SOGA1O94964 1423 aa21.34■■□□□ 1.01
AC004147.4-201ENST00000636421 WRNQ14191 1432 aaPredicted RBP eCLIP21.33■■□□□ 1
AC004147.4-201ENST00000636421 EHMT2Q96KQ7 1210 aa21.31■■□□□ 1
AC004147.4-201ENST00000636421 TNIKQ9UKE5 1360 aa21.27■■□□□ 1
AC004147.4-201ENST00000636421 PPARGC1BQ86YN6 1023 aaKnown RBP21.26■□□□□ 0.99
AC004147.4-201ENST00000636421 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
AC004147.4-201ENST00000636421 SYNJ1O43426 1573 aa21.24■□□□□ 0.99
AC004147.4-201ENST00000636421 RUSC2Q8N2Y8 1516 aa21.23■□□□□ 0.99
AC004147.4-201ENST00000636421 HMGXB3Q12766 1538 aa21.21■□□□□ 0.99
AC004147.4-201ENST00000636421 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
AC004147.4-201ENST00000636421 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
AC004147.4-201ENST00000636421 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
AC004147.4-201ENST00000636421 GOLGA3Q08378 1498 aa21.16■□□□□ 0.98
AC004147.4-201ENST00000636421 KIF21BO75037 1637 aa21.13■□□□□ 0.97
AC004147.4-201ENST00000636421 TOP2BQ02880 1626 aa21.09■□□□□ 0.97
AC004147.4-201ENST00000636421 CEP164Q9UPV0 1460 aa21.08■□□□□ 0.97
AC004147.4-201ENST00000636421 BIVM-ERCC5R4GMW8 1640 aa21.06■□□□□ 0.96
AC004147.4-201ENST00000636421 UBTFP17480 764 aaKnown RBP20.98■□□□□ 0.95
AC004147.4-201ENST00000636421 CFTRP13569 1480 aa20.94■□□□□ 0.94
AC004147.4-201ENST00000636421 CUX1P39880 1505 aa20.87■□□□□ 0.93
AC004147.4-201ENST00000636421 RAPGEF2Q9Y4G8 1499 aa20.86■□□□□ 0.93
AC004147.4-201ENST00000636421 CLIP1P30622 1438 aa20.85■□□□□ 0.93
AC004147.4-201ENST00000636421 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
AC004147.4-201ENST00000636421 ERICH3Q5RHP9 1530 aa20.84■□□□□ 0.93
AC004147.4-201ENST00000636421 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
AC004147.4-201ENST00000636421 VPS8Q8N3P4 1428 aa20.78■□□□□ 0.92
AC004147.4-201ENST00000636421 CC2D2AQ9P2K1 1620 aa20.76■□□□□ 0.91
AC004147.4-201ENST00000636421 KIF27Q86VH2 1401 aa20.72■□□□□ 0.91
AC004147.4-201ENST00000636421 CADPSQ9ULU8 1353 aa20.7■□□□□ 0.9
AC004147.4-201ENST00000636421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.69■□□□□ 0.9
AC004147.4-201ENST00000636421 CCER1Q8TC90 406 aaPredicted RBP20.67■□□□□ 0.9
AC004147.4-201ENST00000636421 TTBK1Q5TCY1 1321 aaPredicted RBP20.61■□□□□ 0.89
AC004147.4-201ENST00000636421 ARAP1Q96P48 1450 aa20.59■□□□□ 0.89
AC004147.4-201ENST00000636421 APLP2Q06481 763 aa20.5■□□□□ 0.87
AC004147.4-201ENST00000636421 IGF1RP08069 1367 aa20.5■□□□□ 0.87
AC004147.4-201ENST00000636421 CUX2O14529 1486 aa20.5■□□□□ 0.87
AC004147.4-201ENST00000636421 FGD5Q6ZNL6 1462 aa20.5■□□□□ 0.87
AC004147.4-201ENST00000636421 DNAJC5BQ9UF47 199 aa20.47■□□□□ 0.87
AC004147.4-201ENST00000636421 FANCD2Q9BXW9 1451 aa20.46■□□□□ 0.87
AC004147.4-201ENST00000636421 ARHGAP35Q9NRY4 1499 aa20.44■□□□□ 0.86
AC004147.4-201ENST00000636421 DNMBPQ6XZF7 1577 aa20.42■□□□□ 0.86
AC004147.4-201ENST00000636421 RANGAP1P46060 587 aaPredicted RBP20.39■□□□□ 0.85
AC004147.4-201ENST00000636421 CARMIL1Q5VZK9 1371 aa20.38■□□□□ 0.85
AC004147.4-201ENST00000636421 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
AC004147.4-201ENST00000636421 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
AC004147.4-201ENST00000636421 TOPBP1Q92547 1522 aa20.34■□□□□ 0.85
AC004147.4-201ENST00000636421 MAP3K1Q13233 1512 aa20.33■□□□□ 0.84
AC004147.4-201ENST00000636421 RRBP1Q9P2E9 1410 aaKnown RBP20.32■□□□□ 0.84
AC004147.4-201ENST00000636421 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
AC004147.4-201ENST00000636421 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
AC004147.4-201ENST00000636421 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
AC004147.4-201ENST00000636421 NESP48681 1621 aa20.28■□□□□ 0.84
AC004147.4-201ENST00000636421 RAD54L2Q9Y4B4 1467 aa20.24■□□□□ 0.83
AC004147.4-201ENST00000636421 CUL7Q14999 1698 aa20.23■□□□□ 0.83
AC004147.4-201ENST00000636421 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
AC004147.4-201ENST00000636421 TIAM1Q13009 1591 aa20.21■□□□□ 0.83
AC004147.4-201ENST00000636421 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
AC004147.4-201ENST00000636421 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
AC004147.4-201ENST00000636421 ZNF316A6NFI3 1004 aaPredicted RBP20.18■□□□□ 0.82
AC004147.4-201ENST00000636421 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
AC004147.4-201ENST00000636421 FHAD1B1AJZ9 1412 aa20.16■□□□□ 0.82
AC004147.4-201ENST00000636421 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
AC004147.4-201ENST00000636421 EFCAB5A4FU69 1503 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms