RNA–Protein interactions for RNA: ENST00000312189.10

PHF19-201, Transcript of PHD finger protein 19, humanhuman

TSL 1 (best) BASIC

Gene PHF19, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF19-201ENST00000312189 NISCHQ9Y2I1 1504 aa41.52■■■■■ 4.24
PHF19-201ENST00000312189 ABCC9O60706 1549 aa37.38■■■■□ 3.57
PHF19-201ENST00000312189 CCDC180Q9P1Z9 1646 aa37.28■■■■□ 3.56
PHF19-201ENST00000312189 RB1CC1Q8TDY2 1594 aa35.58■■■■□ 3.29
PHF19-201ENST00000312189 NACADO15069 1562 aa35.33■■■■□ 3.25
PHF19-201ENST00000312189 DCAF8L2P0C7V8 631 aa35.15■■■■□ 3.22
PHF19-201ENST00000312189 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
PHF19-201ENST00000312189 MYO15BQ96JP2 1530 aa34.84■■■■□ 3.17
PHF19-201ENST00000312189 PABPN1Q86U42 306 aaKnown RBP eCLIP34.81■■■■□ 3.16
PHF19-201ENST00000312189 UNC13AQ9UPW8 1703 aa34.62■■■■□ 3.13
PHF19-201ENST00000312189 BICRAQ9NZM4 1560 aa34.45■■■■□ 3.11
PHF19-201ENST00000312189 ZCCHC6Q5VYS8 1495 aaKnown RBP34.38■■■■□ 3.09
PHF19-201ENST00000312189 DCAF1Q9Y4B6 1507 aa34.34■■■■□ 3.09
PHF19-201ENST00000312189 SHROOM4Q9ULL8 1493 aa34.13■■■■□ 3.05
PHF19-201ENST00000312189 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
PHF19-201ENST00000312189 CC2D2AQ9P2K1 1620 aa33.75■■■□□ 2.99
PHF19-201ENST00000312189 CECR2Q9BXF3 1484 aa33.72■■■□□ 2.99
PHF19-201ENST00000312189 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
PHF19-201ENST00000312189 NCAPD3P42695 1498 aa32.62■■■□□ 2.81
PHF19-201ENST00000312189 ATAD2BQ9ULI0 1458 aa32.48■■■□□ 2.79
PHF19-201ENST00000312189 DNAJC5Q9H3Z4 198 aa32.43■■■□□ 2.78
PHF19-201ENST00000312189 SMARCA2P51531 1590 aa32.41■■■□□ 2.78
PHF19-201ENST00000312189 SMARCA4P51532 1647 aa32.38■■■□□ 2.77
PHF19-201ENST00000312189 HMGXB3Q12766 1538 aa32.34■■■□□ 2.77
PHF19-201ENST00000312189 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
PHF19-201ENST00000312189 CUX2O14529 1486 aa32.32■■■□□ 2.76
PHF19-201ENST00000312189 BAZ1AQ9NRL2 1556 aaPredicted RBP32.27■■■□□ 2.76
PHF19-201ENST00000312189 BAZ1BQ9UIG0 1483 aaKnown RBP32.17■■■□□ 2.74
PHF19-201ENST00000312189 PEG3Q9GZU2 1588 aa32.11■■■□□ 2.73
PHF19-201ENST00000312189 NESP48681 1621 aa32.04■■■□□ 2.72
PHF19-201ENST00000312189 MROH2BQ7Z745 1585 aa31.95■■■□□ 2.71
PHF19-201ENST00000312189 LAMC3Q9Y6N6 1575 aa31.88■■■□□ 2.69
PHF19-201ENST00000312189 PDS5BQ9NTI5 1447 aa31.76■■■□□ 2.68
PHF19-201ENST00000312189 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
PHF19-201ENST00000312189 CADPSQ9ULU8 1353 aa31.64■■■□□ 2.66
PHF19-201ENST00000312189 KIF21AQ7Z4S6 1674 aa31.6■■■□□ 2.65
PHF19-201ENST00000312189 WIZO95785 1651 aa31.54■■■□□ 2.64
PHF19-201ENST00000312189 MRC2Q9UBG0 1479 aa31.44■■■□□ 2.62
PHF19-201ENST00000312189 WDR62O43379 1518 aa31.34■■■□□ 2.61
PHF19-201ENST00000312189 CEP164Q9UPV0 1460 aa31.3■■■□□ 2.6
PHF19-201ENST00000312189 RSF1Q96T23 1441 aaPredicted RBP31.3■■■□□ 2.6
PHF19-201ENST00000312189 FANCD2Q9BXW9 1451 aa31.25■■■□□ 2.59
PHF19-201ENST00000312189 CFTRP13569 1480 aa31.23■■■□□ 2.59
PHF19-201ENST00000312189 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
PHF19-201ENST00000312189 URB2Q14146 1524 aaKnown RBP30.95■■■□□ 2.55
PHF19-201ENST00000312189 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
PHF19-201ENST00000312189 OSCARQ8IYS5 282 aa30.89■■■□□ 2.54
PHF19-201ENST00000312189 CCDC88BA6NC98 1476 aa30.84■■■□□ 2.53
PHF19-201ENST00000312189 PRDM2Q13029 1718 aa30.81■■■□□ 2.52
PHF19-201ENST00000312189 IFT140Q96RY7 1462 aa30.7■■■□□ 2.5
PHF19-201ENST00000312189 ABCC8Q09428 1581 aa30.65■■■□□ 2.5
PHF19-201ENST00000312189 TOPBP1Q92547 1522 aa30.63■■■□□ 2.49
PHF19-201ENST00000312189 ZNF608Q9ULD9 1512 aaPredicted RBP30.57■■■□□ 2.49
PHF19-201ENST00000312189 DNMBPQ6XZF7 1577 aa30.5■■■□□ 2.47
PHF19-201ENST00000312189 EIF4G3O43432 1585 aaKnown RBP30.4■■■□□ 2.46
PHF19-201ENST00000312189 RIMBP3CA6NJZ7 1639 aa30.35■■■□□ 2.45
PHF19-201ENST00000312189 RIMBP3BA6NNM3 1639 aa30.35■■■□□ 2.45
PHF19-201ENST00000312189 RIMBP3Q9UFD9 1639 aa30.35■■■□□ 2.45
PHF19-201ENST00000312189 TARBP1Q13395 1621 aaKnown RBP30.32■■■□□ 2.44
PHF19-201ENST00000312189 AQRO60306 1485 aaKnown RBP eCLIP30.31■■■□□ 2.443e-7■■■■□ 19.8
PHF19-201ENST00000312189 POLA1P09884 1462 aaPredicted RBP30.31■■■□□ 2.44
PHF19-201ENST00000312189 ARHGEF11O15085 1522 aa30.28■■■□□ 2.44
PHF19-201ENST00000312189 SOGA1O94964 1423 aa30.22■■■□□ 2.43
PHF19-201ENST00000312189 FBLN2P98095 1184 aa30.2■■■□□ 2.43
PHF19-201ENST00000312189 RAD54L2Q9Y4B4 1467 aa30.18■■■□□ 2.42
PHF19-201ENST00000312189 CHD1O14646 1710 aa30.16■■■□□ 2.42
PHF19-201ENST00000312189 TDRD9Q8NDG6 1382 aaKnown RBP30.14■■■□□ 2.41
PHF19-201ENST00000312189 CYB5RLQ6IPT4 315 aa30.13■■■□□ 2.41
PHF19-201ENST00000312189 FGD5Q6ZNL6 1462 aa30.1■■■□□ 2.41
PHF19-201ENST00000312189 WDR97A6NE52 1622 aa30.09■■■□□ 2.41
PHF19-201ENST00000312189 CUX1P39880 1505 aa30.02■■■□□ 2.4
PHF19-201ENST00000312189 SNAPC4Q5SXM2 1469 aa30■■■□□ 2.39
PHF19-201ENST00000312189 CHMP7Q8WUX9 453 aaPredicted RBP30■■■□□ 2.39
PHF19-201ENST00000312189 MAGI1Q96QZ7 1491 aaPredicted RBP29.98■■■□□ 2.39
PHF19-201ENST00000312189 GRIN2BQ13224 1484 aa29.96■■■□□ 2.39
PHF19-201ENST00000312189 ARAP1Q96P48 1450 aa29.96■■■□□ 2.39
PHF19-201ENST00000312189 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
PHF19-201ENST00000312189 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
PHF19-201ENST00000312189 SYNJ2O15056 1496 aa29.87■■■□□ 2.37
PHF19-201ENST00000312189 CLASP1Q7Z460 1538 aa29.86■■■□□ 2.37
PHF19-201ENST00000312189 TRHP20396 242 aaPredicted RBP29.85■■■□□ 2.37
PHF19-201ENST00000312189 GAPVD1Q14C86 1478 aa29.83■■■□□ 2.37
PHF19-201ENST00000312189 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
PHF19-201ENST00000312189 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
PHF19-201ENST00000312189 ABCA5Q8WWZ7 1642 aa29.69■■■□□ 2.34
PHF19-201ENST00000312189 WRNQ14191 1432 aaPredicted RBP eCLIP29.69■■■□□ 2.34
PHF19-201ENST00000312189 GRIN2AQ12879 1464 aa29.55■■■□□ 2.32
PHF19-201ENST00000312189 TOP2BQ02880 1626 aa29.54■■■□□ 2.32
PHF19-201ENST00000312189 BIVM-ERCC5R4GMW8 1640 aa29.52■■■□□ 2.32
PHF19-201ENST00000312189 ADAMTS12P58397 1594 aa29.47■■■□□ 2.31
PHF19-201ENST00000312189 FHAD1B1AJZ9 1412 aa29.47■■■□□ 2.31
PHF19-201ENST00000312189 NUP160Q12769 1436 aa29.46■■■□□ 2.31
PHF19-201ENST00000312189 ERICH3Q5RHP9 1530 aa29.41■■■□□ 2.3
PHF19-201ENST00000312189 CEP170Q5SW79 1584 aa29.39■■■□□ 2.3
PHF19-201ENST00000312189 ERCC6L2Q5T890 1561 aa29.33■■■□□ 2.29
PHF19-201ENST00000312189 SHROOM2Q13796 1616 aa29.29■■■□□ 2.28
PHF19-201ENST00000312189 JPH4Q96JJ6 628 aa29.21■■■□□ 2.27
PHF19-201ENST00000312189 PRG4Q92954 1404 aaPredicted RBP29.2■■■□□ 2.26
PHF19-201ENST00000312189 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
PHF19-201ENST00000312189 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms