RNA–Protein interactions for RNA: ENST00000311034.6

NPAS4-201, Transcript of neuronal PAS domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS4, Length 3,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4-201ENST00000311034 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.77
NPAS4-201ENST00000311034 SHROOM4Q9ULL8 1493 aa23.68■■□□□ 1.38
NPAS4-201ENST00000311034 DCAF8L2P0C7V8 631 aa23.59■■□□□ 1.37
NPAS4-201ENST00000311034 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
NPAS4-201ENST00000311034 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
NPAS4-201ENST00000311034 PCGF6Q9BYE7 350 aa22.53■■□□□ 1.2
NPAS4-201ENST00000311034 HRCP23327 699 aa22.49■■□□□ 1.19
NPAS4-201ENST00000311034 CHIC1Q5VXU3 224 aa22.36■■□□□ 1.17
NPAS4-201ENST00000311034 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
NPAS4-201ENST00000311034 MYO15BQ96JP2 1530 aa22.32■■□□□ 1.16
NPAS4-201ENST00000311034 FAM9AQ8IZU1 332 aaPredicted RBP22.11■■□□□ 1.13
NPAS4-201ENST00000311034 LOC105371045A0A1W2PR82 267 aa22.11■■□□□ 1.13
NPAS4-201ENST00000311034 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
NPAS4-201ENST00000311034 TTBK1Q5TCY1 1321 aaPredicted RBP21.84■■□□□ 1.09
NPAS4-201ENST00000311034 CCDC180Q9P1Z9 1646 aa21.72■■□□□ 1.07
NPAS4-201ENST00000311034 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
NPAS4-201ENST00000311034 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
NPAS4-201ENST00000311034 TRIM41Q8WV44 630 aa21.37■■□□□ 1.01
NPAS4-201ENST00000311034 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
NPAS4-201ENST00000311034 RANGAP1P46060 587 aaPredicted RBP21.18■□□□□ 0.98
NPAS4-201ENST00000311034 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
NPAS4-201ENST00000311034 PELP1Q8IZL8 1130 aaKnown RBP21.04■□□□□ 0.96
NPAS4-201ENST00000311034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.96
NPAS4-201ENST00000311034 CCER1Q8TC90 406 aaPredicted RBP20.98■□□□□ 0.95
NPAS4-201ENST00000311034 RSF1Q96T23 1441 aaPredicted RBP20.95■□□□□ 0.94
NPAS4-201ENST00000311034 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
NPAS4-201ENST00000311034 ABCC9O60706 1549 aa20.87■□□□□ 0.93
NPAS4-201ENST00000311034 YTHDC1Q96MU7 727 aaKnown RBP20.86■□□□□ 0.93
NPAS4-201ENST00000311034 RB1CC1Q8TDY2 1594 aa20.8■□□□□ 0.92
NPAS4-201ENST00000311034 NEUROD1Q13562 356 aa20.78■□□□□ 0.92
NPAS4-201ENST00000311034 ACIN1Q9UKV3 1341 aaKnown RBP20.73■□□□□ 0.91
NPAS4-201ENST00000311034 GTF3C3Q9Y5Q9 886 aa20.7■□□□□ 0.9
NPAS4-201ENST00000311034 DIEXFQ68CQ4 756 aaKnown RBP20.7■□□□□ 0.9
NPAS4-201ENST00000311034 UBTFP17480 764 aaKnown RBP20.69■□□□□ 0.9
NPAS4-201ENST00000311034 CENPBP07199 599 aaPredicted RBP20.64■□□□□ 0.89
NPAS4-201ENST00000311034 CECR2Q9BXF3 1484 aa20.6■□□□□ 0.89
NPAS4-201ENST00000311034 HNRNPUL2Q1KMD3 747 aaKnown RBP20.56■□□□□ 0.88
NPAS4-201ENST00000311034 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
NPAS4-201ENST00000311034 PABPN1Q86U42 306 aaKnown RBP eCLIP20.43■□□□□ 0.86
NPAS4-201ENST00000311034 WIZO95785 1651 aa20.34■□□□□ 0.85
NPAS4-201ENST00000311034 ITGAEP38570 1179 aa20.31■□□□□ 0.84
NPAS4-201ENST00000311034 ZNF316A6NFI3 1004 aaPredicted RBP20.29■□□□□ 0.84
NPAS4-201ENST00000311034 APLP2Q06481 763 aa20.27■□□□□ 0.84
NPAS4-201ENST00000311034 CEP162Q5TB80 1403 aa20.22■□□□□ 0.83
NPAS4-201ENST00000311034 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
NPAS4-201ENST00000311034 MIER1Q8N108 512 aa20.19■□□□□ 0.82
NPAS4-201ENST00000311034 NACADO15069 1562 aa20.18■□□□□ 0.82
NPAS4-201ENST00000311034 CCDC88BA6NC98 1476 aa20.17■□□□□ 0.82
NPAS4-201ENST00000311034 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
NPAS4-201ENST00000311034 SOGA1O94964 1423 aa20.15■□□□□ 0.82
NPAS4-201ENST00000311034 CSRNP3Q8WYN3 585 aa20.12■□□□□ 0.81
NPAS4-201ENST00000311034 BAZ1AQ9NRL2 1556 aaPredicted RBP20.04■□□□□ 0.8
NPAS4-201ENST00000311034 MYT1Q01538 1121 aa20.04■□□□□ 0.8
NPAS4-201ENST00000311034 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.8
NPAS4-201ENST00000311034 TNIKQ9UKE5 1360 aa20■□□□□ 0.79
NPAS4-201ENST00000311034 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
NPAS4-201ENST00000311034 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
NPAS4-201ENST00000311034 TOP2AP11388 1531 aaKnown RBP19.88■□□□□ 0.77
NPAS4-201ENST00000311034 GOLGA3Q08378 1498 aa19.84■□□□□ 0.77
NPAS4-201ENST00000311034 BCANQ96GW7 911 aa19.84■□□□□ 0.77
NPAS4-201ENST00000311034 SMARCA2P51531 1590 aa19.82■□□□□ 0.76
NPAS4-201ENST00000311034 CNGB1Q14028 1251 aaPredicted RBP19.81■□□□□ 0.76
NPAS4-201ENST00000311034 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
NPAS4-201ENST00000311034 CLIP1P30622 1438 aa19.79■□□□□ 0.76
NPAS4-201ENST00000311034 EEA1Q15075 1411 aa19.74■□□□□ 0.75
NPAS4-201ENST00000311034 HIRIP3Q9BW71 556 aaPredicted RBP19.73■□□□□ 0.75
NPAS4-201ENST00000311034 P3H3Q8IVL6 736 aa19.72■□□□□ 0.75
NPAS4-201ENST00000311034 SUPT16HQ9Y5B9 1047 aaKnown RBP19.66■□□□□ 0.74
NPAS4-201ENST00000311034 CEP164Q9UPV0 1460 aa19.64■□□□□ 0.73
NPAS4-201ENST00000311034 VPS8Q8N3P4 1428 aa19.6■□□□□ 0.73
NPAS4-201ENST00000311034 RAPGEF2Q9Y4G8 1499 aa19.56■□□□□ 0.72
NPAS4-201ENST00000311034 FAM50AQ14320 339 aaKnown RBP19.56■□□□□ 0.72
NPAS4-201ENST00000311034 KANK4Q5T7N3 995 aaPredicted RBP19.54■□□□□ 0.72
NPAS4-201ENST00000311034 KCNH8Q96L42 1107 aa19.54■□□□□ 0.72
NPAS4-201ENST00000311034 SYNJ1O43426 1573 aa19.5■□□□□ 0.71
NPAS4-201ENST00000311034 DHX57Q6P158 1386 aaKnown RBP19.5■□□□□ 0.71
NPAS4-201ENST00000311034 ARID3CA6NKF2 412 aa19.49■□□□□ 0.71
NPAS4-201ENST00000311034 TSHZ2Q9NRE2 1034 aa19.46■□□□□ 0.71
NPAS4-201ENST00000311034 UNC13AQ9UPW8 1703 aa19.46■□□□□ 0.71
NPAS4-201ENST00000311034 SENP3-EIF4A1A0A087X0R7 540 aa19.41■□□□□ 0.7
NPAS4-201ENST00000311034 DDX10Q13206 875 aaKnown RBP19.41■□□□□ 0.7
NPAS4-201ENST00000311034 FKBP8Q14318 412 aa19.41■□□□□ 0.7
NPAS4-201ENST00000311034 KIF21BO75037 1637 aa19.4■□□□□ 0.7
NPAS4-201ENST00000311034 TRIM52Q96A61 297 aa19.37■□□□□ 0.69
NPAS4-201ENST00000311034 CLSPNQ9HAW4 1339 aa19.36■□□□□ 0.69
NPAS4-201ENST00000311034 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
NPAS4-201ENST00000311034 BAZ1BQ9UIG0 1483 aaKnown RBP19.35■□□□□ 0.69
NPAS4-201ENST00000311034 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
NPAS4-201ENST00000311034 NEFLP07196 543 aa19.31■□□□□ 0.68
NPAS4-201ENST00000311034 ANP32EQ9BTT0 268 aa19.31■□□□□ 0.68
NPAS4-201ENST00000311034 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
NPAS4-201ENST00000311034 SIN3AQ96ST3 1273 aa19.3■□□□□ 0.68
NPAS4-201ENST00000311034 IRX6P78412 446 aaPredicted RBP19.27■□□□□ 0.68
NPAS4-201ENST00000311034 CCNB3Q8WWL7 1395 aa19.24■□□□□ 0.67
NPAS4-201ENST00000311034 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
NPAS4-201ENST00000311034 RAB3GAP2Q9H2M9 1393 aa19.2■□□□□ 0.66
NPAS4-201ENST00000311034 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
NPAS4-201ENST00000311034 ANP32CO43423 234 aa19.13■□□□□ 0.65
NPAS4-201ENST00000311034 CHIC2Q9UKJ5 165 aa19.11■□□□□ 0.65
NPAS4-201ENST00000311034 PRXQ9BXM0 1461 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms