RNA–Protein interactions for RNA: ENST00000395397.7

NR1H3-201, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-201ENST00000395397 NISCHQ9Y2I1 1504 aa28.81■■■□□ 2.2
NR1H3-201ENST00000395397 ABCC9O60706 1549 aa24.84■■□□□ 1.57
NR1H3-201ENST00000395397 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
NR1H3-201ENST00000395397 ZCCHC6Q5VYS8 1495 aaKnown RBP24.33■■□□□ 1.48
NR1H3-201ENST00000395397 DCAF1Q9Y4B6 1507 aa23.92■■□□□ 1.42
NR1H3-201ENST00000395397 DNAJC5BQ9UF47 199 aa23.9■■□□□ 1.42
NR1H3-201ENST00000395397 SHROOM4Q9ULL8 1493 aa23.78■■□□□ 1.4
NR1H3-201ENST00000395397 MYO15BQ96JP2 1530 aa23.4■■□□□ 1.34
NR1H3-201ENST00000395397 DCAF8L2P0C7V8 631 aa23.4■■□□□ 1.34
NR1H3-201ENST00000395397 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
NR1H3-201ENST00000395397 SUPT5HO00267 1087 aaKnown RBP23.3■■□□□ 1.32
NR1H3-201ENST00000395397 PABPN1Q86U42 306 aaKnown RBP eCLIP23.03■■□□□ 1.28
NR1H3-201ENST00000395397 NACADO15069 1562 aa22.99■■□□□ 1.27
NR1H3-201ENST00000395397 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
NR1H3-201ENST00000395397 UNC13AQ9UPW8 1703 aa22.78■■□□□ 1.24
NR1H3-201ENST00000395397 SCRIBQ14160 1630 aa22.74■■□□□ 1.23
NR1H3-201ENST00000395397 BICRAQ9NZM4 1560 aa22.65■■□□□ 1.22
NR1H3-201ENST00000395397 RSF1Q96T23 1441 aaPredicted RBP22.62■■□□□ 1.21
NR1H3-201ENST00000395397 DNAJC5Q9H3Z4 198 aa22.45■■□□□ 1.18
NR1H3-201ENST00000395397 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
NR1H3-201ENST00000395397 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
NR1H3-201ENST00000395397 MROH2BQ7Z745 1585 aa22.23■■□□□ 1.15
NR1H3-201ENST00000395397 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
NR1H3-201ENST00000395397 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
NR1H3-201ENST00000395397 WIZO95785 1651 aa22.04■■□□□ 1.12
NR1H3-201ENST00000395397 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
NR1H3-201ENST00000395397 SMARCA4P51532 1647 aa21.94■■□□□ 1.1
NR1H3-201ENST00000395397 LOC105371045A0A1W2PR82 267 aa21.89■■□□□ 1.09
NR1H3-201ENST00000395397 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
NR1H3-201ENST00000395397 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
NR1H3-201ENST00000395397 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
NR1H3-201ENST00000395397 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
NR1H3-201ENST00000395397 CUX2O14529 1486 aa21.66■■□□□ 1.06
NR1H3-201ENST00000395397 HRCP23327 699 aa21.65■■□□□ 1.06
NR1H3-201ENST00000395397 PCGF6Q9BYE7 350 aa21.6■■□□□ 1.05
NR1H3-201ENST00000395397 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
NR1H3-201ENST00000395397 ERCC6Q03468 1493 aa21.5■■□□□ 1.03
NR1H3-201ENST00000395397 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
NR1H3-201ENST00000395397 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
NR1H3-201ENST00000395397 EEA1Q15075 1411 aa21.39■■□□□ 1.02
NR1H3-201ENST00000395397 ABCC8Q09428 1581 aa21.35■■□□□ 1.01
NR1H3-201ENST00000395397 BAZ1BQ9UIG0 1483 aaKnown RBP21.31■■□□□ 1
NR1H3-201ENST00000395397 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
NR1H3-201ENST00000395397 WRNQ14191 1432 aaPredicted RBP eCLIP21.24■□□□□ 0.99
NR1H3-201ENST00000395397 TNIKQ9UKE5 1360 aa21.19■□□□□ 0.98
NR1H3-201ENST00000395397 HMGXB3Q12766 1538 aa21.19■□□□□ 0.98
NR1H3-201ENST00000395397 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
NR1H3-201ENST00000395397 SOGA1O94964 1423 aa21.17■□□□□ 0.98
NR1H3-201ENST00000395397 NESP48681 1621 aa21.13■□□□□ 0.97
NR1H3-201ENST00000395397 ZEB1P37275 1124 aaPredicted RBP21.11■□□□□ 0.97
NR1H3-201ENST00000395397 SYNJ1O43426 1573 aa21.06■□□□□ 0.96
NR1H3-201ENST00000395397 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
NR1H3-201ENST00000395397 GOLGA3Q08378 1498 aa21.03■□□□□ 0.96
NR1H3-201ENST00000395397 THOC2Q8NI27 1593 aaKnown RBP21.03■□□□□ 0.96
NR1H3-201ENST00000395397 CEP162Q5TB80 1403 aa21.02■□□□□ 0.96
NR1H3-201ENST00000395397 KIF21BO75037 1637 aa21■□□□□ 0.95
NR1H3-201ENST00000395397 TOP2BQ02880 1626 aa20.99■□□□□ 0.95
NR1H3-201ENST00000395397 CEP164Q9UPV0 1460 aa20.98■□□□□ 0.95
NR1H3-201ENST00000395397 EHMT2Q96KQ7 1210 aa20.98■□□□□ 0.95
NR1H3-201ENST00000395397 BIVM-ERCC5R4GMW8 1640 aa20.95■□□□□ 0.94
NR1H3-201ENST00000395397 CFTRP13569 1480 aa20.91■□□□□ 0.94
NR1H3-201ENST00000395397 PPARGC1BQ86YN6 1023 aaKnown RBP20.88■□□□□ 0.93
NR1H3-201ENST00000395397 LAMC3Q9Y6N6 1575 aa20.87■□□□□ 0.93
NR1H3-201ENST00000395397 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
NR1H3-201ENST00000395397 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
NR1H3-201ENST00000395397 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
NR1H3-201ENST00000395397 ERICH3Q5RHP9 1530 aa20.75■□□□□ 0.91
NR1H3-201ENST00000395397 PRXQ9BXM0 1461 aa20.73■□□□□ 0.91
NR1H3-201ENST00000395397 PRDM2Q13029 1718 aa20.73■□□□□ 0.91
NR1H3-201ENST00000395397 CUX1P39880 1505 aa20.73■□□□□ 0.91
NR1H3-201ENST00000395397 CLIP1P30622 1438 aa20.71■□□□□ 0.91
NR1H3-201ENST00000395397 RAPGEF2Q9Y4G8 1499 aa20.71■□□□□ 0.91
NR1H3-201ENST00000395397 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
NR1H3-201ENST00000395397 VPS8Q8N3P4 1428 aa20.66■□□□□ 0.9
NR1H3-201ENST00000395397 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
NR1H3-201ENST00000395397 MRC2Q9UBG0 1479 aa20.63■□□□□ 0.89
NR1H3-201ENST00000395397 OSCARQ8IYS5 282 aa20.6■□□□□ 0.89
NR1H3-201ENST00000395397 WDR62O43379 1518 aa20.59■□□□□ 0.89
NR1H3-201ENST00000395397 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
NR1H3-201ENST00000395397 IGF1RP08069 1367 aa20.45■□□□□ 0.86
NR1H3-201ENST00000395397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
NR1H3-201ENST00000395397 APLP2Q06481 763 aa20.43■□□□□ 0.86
NR1H3-201ENST00000395397 ARAP1Q96P48 1450 aa20.41■□□□□ 0.86
NR1H3-201ENST00000395397 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
NR1H3-201ENST00000395397 FANCD2Q9BXW9 1451 aa20.39■□□□□ 0.85
NR1H3-201ENST00000395397 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
NR1H3-201ENST00000395397 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
NR1H3-201ENST00000395397 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
NR1H3-201ENST00000395397 DNMBPQ6XZF7 1577 aa20.35■□□□□ 0.85
NR1H3-201ENST00000395397 CARMIL1Q5VZK9 1371 aa20.32■□□□□ 0.84
NR1H3-201ENST00000395397 ARHGAP35Q9NRY4 1499 aa20.3■□□□□ 0.84
NR1H3-201ENST00000395397 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
NR1H3-201ENST00000395397 MAP3K1Q13233 1512 aa20.29■□□□□ 0.84
NR1H3-201ENST00000395397 TTBK1Q5TCY1 1321 aaPredicted RBP20.27■□□□□ 0.84
NR1H3-201ENST00000395397 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
NR1H3-201ENST00000395397 ARHGEF11O15085 1522 aa20.24■□□□□ 0.83
NR1H3-201ENST00000395397 RRBP1Q9P2E9 1410 aaKnown RBP20.21■□□□□ 0.83
NR1H3-201ENST00000395397 POLA1P09884 1462 aaPredicted RBP20.21■□□□□ 0.83
NR1H3-201ENST00000395397 URB2Q14146 1524 aaKnown RBP20.2■□□□□ 0.82
NR1H3-201ENST00000395397 TRHP20396 242 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms