Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 RNA5SP491-201ENST00000362936 118 ntBASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 AP000354.1-201ENST00000396982 456 ntBASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 AP000244.1-201ENST00000424582 201 ntBASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 AC024075.2-201ENST00000598112 1473 ntBASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC20.79■□□□□ 0.92
SHANK2Q9UPX8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AC023906.1-201ENST00000486386 453 ntBASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 KNOP1P1-201ENST00000542108 989 ntBASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AC068831.5-201ENST00000557387 328 ntBASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 AC018846.1-201ENST00000568231 183 ntBASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SHANK2Q9UPX8 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 AL929302.1-201ENST00000426556 871 ntBASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 PMEL-214ENST00000550447 901 ntTSL 3 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 MIR3940-201ENST00000579148 102 ntBASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SHANK2Q9UPX8 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHANK2Q9UPX8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHANK2Q9UPX8 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHANK2Q9UPX8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SHANK2Q9UPX8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
SHANK2Q9UPX8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 HLA-DMA-202ENST00000395303 1007 ntBASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 OR51A9P-201ENST00000422578 911 ntBASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 SEPHS2P1-201ENST00000511618 1162 ntBASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC20.76■□□□□ 0.91
SHANK2Q9UPX8 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms