RNA–Protein interactions for RNA: ENST00000344956.8

PVR-202, Transcript of poliovirus receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PVR, Length 3,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVR-202ENST00000344956 NISCHQ9Y2I1 1504 aa31.46■■■□□ 2.63
PVR-202ENST00000344956 SHROOM4Q9ULL8 1493 aa26.8■■□□□ 1.88
PVR-202ENST00000344956 CCDC180Q9P1Z9 1646 aa26.77■■□□□ 1.88
PVR-202ENST00000344956 ZCCHC6Q5VYS8 1495 aaKnown RBP26.59■■□□□ 1.85
PVR-202ENST00000344956 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
PVR-202ENST00000344956 DCAF8L2P0C7V8 631 aa26.14■■□□□ 1.77
PVR-202ENST00000344956 DCAF1Q9Y4B6 1507 aa25.8■■□□□ 1.72
PVR-202ENST00000344956 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
PVR-202ENST00000344956 MYO15BQ96JP2 1530 aa25.38■■□□□ 1.65
PVR-202ENST00000344956 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
PVR-202ENST00000344956 ABCC9O60706 1549 aa25.08■■□□□ 1.6
PVR-202ENST00000344956 RSF1Q96T23 1441 aaPredicted RBP24.88■■□□□ 1.57
PVR-202ENST00000344956 NACADO15069 1562 aa24.77■■□□□ 1.56
PVR-202ENST00000344956 LOC105371045A0A1W2PR82 267 aa24.75■■□□□ 1.55
PVR-202ENST00000344956 PCGF6Q9BYE7 350 aa24.66■■□□□ 1.54
PVR-202ENST00000344956 RB1CC1Q8TDY2 1594 aa24.61■■□□□ 1.53
PVR-202ENST00000344956 HRCP23327 699 aa24.6■■□□□ 1.53
PVR-202ENST00000344956 CECR2Q9BXF3 1484 aa24.55■■□□□ 1.52
PVR-202ENST00000344956 TRIM41Q8WV44 630 aa24.47■■□□□ 1.51
PVR-202ENST00000344956 MROH2BQ7Z745 1585 aa24.46■■□□□ 1.51
PVR-202ENST00000344956 WIZO95785 1651 aa24.33■■□□□ 1.49
PVR-202ENST00000344956 FAM9AQ8IZU1 332 aaPredicted RBP24.27■■□□□ 1.48
PVR-202ENST00000344956 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
PVR-202ENST00000344956 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
PVR-202ENST00000344956 PPARGC1BQ86YN6 1023 aaKnown RBP24.11■■□□□ 1.45
PVR-202ENST00000344956 EHMT2Q96KQ7 1210 aa24.07■■□□□ 1.44
PVR-202ENST00000344956 UNC13AQ9UPW8 1703 aa24.03■■□□□ 1.44
PVR-202ENST00000344956 SMARCA4P51532 1647 aa23.97■■□□□ 1.43
PVR-202ENST00000344956 EIF4G1Q04637 1599 aaKnown RBP23.96■■□□□ 1.43
PVR-202ENST00000344956 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
PVR-202ENST00000344956 CCDC88BA6NC98 1476 aa23.85■■□□□ 1.41
PVR-202ENST00000344956 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
PVR-202ENST00000344956 PABPN1Q86U42 306 aaKnown RBP eCLIP23.78■■□□□ 1.4
PVR-202ENST00000344956 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
PVR-202ENST00000344956 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
PVR-202ENST00000344956 ZEB1P37275 1124 aaPredicted RBP23.63■■□□□ 1.37
PVR-202ENST00000344956 SOGA1O94964 1423 aa23.54■■□□□ 1.36
PVR-202ENST00000344956 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
PVR-202ENST00000344956 RUSC2Q8N2Y8 1516 aa23.43■■□□□ 1.34
PVR-202ENST00000344956 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
PVR-202ENST00000344956 CEP162Q5TB80 1403 aa23.4■■□□□ 1.34
PVR-202ENST00000344956 EEA1Q15075 1411 aa23.39■■□□□ 1.34
PVR-202ENST00000344956 WRNQ14191 1432 aaPredicted RBP eCLIP23.38■■□□□ 1.33
PVR-202ENST00000344956 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
PVR-202ENST00000344956 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
PVR-202ENST00000344956 UBTFP17480 764 aaKnown RBP23.32■■□□□ 1.32
PVR-202ENST00000344956 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
PVR-202ENST00000344956 TTBK1Q5TCY1 1321 aaPredicted RBP23.28■■□□□ 1.32
PVR-202ENST00000344956 SYNJ1O43426 1573 aa23.26■■□□□ 1.31
PVR-202ENST00000344956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.26■■□□□ 1.31
PVR-202ENST00000344956 GOLGA3Q08378 1498 aa23.24■■□□□ 1.31
PVR-202ENST00000344956 CCER1Q8TC90 406 aaPredicted RBP23.19■■□□□ 1.3
PVR-202ENST00000344956 CEP164Q9UPV0 1460 aa23.12■■□□□ 1.29
PVR-202ENST00000344956 KIF21BO75037 1637 aa23.08■■□□□ 1.29
PVR-202ENST00000344956 CLIP1P30622 1438 aa22.98■■□□□ 1.27
PVR-202ENST00000344956 TOP2BQ02880 1626 aa22.98■■□□□ 1.27
PVR-202ENST00000344956 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
PVR-202ENST00000344956 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
PVR-202ENST00000344956 HMGXB3Q12766 1538 aa22.91■■□□□ 1.26
PVR-202ENST00000344956 BIVM-ERCC5R4GMW8 1640 aa22.89■■□□□ 1.26
PVR-202ENST00000344956 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
PVR-202ENST00000344956 VPS8Q8N3P4 1428 aa22.87■■□□□ 1.25
PVR-202ENST00000344956 APLP2Q06481 763 aa22.79■■□□□ 1.24
PVR-202ENST00000344956 CUX1P39880 1505 aa22.77■■□□□ 1.24
PVR-202ENST00000344956 HNRNPUL2Q1KMD3 747 aaKnown RBP22.77■■□□□ 1.23
PVR-202ENST00000344956 PRXQ9BXM0 1461 aa22.74■■□□□ 1.23
PVR-202ENST00000344956 CFTRP13569 1480 aa22.73■■□□□ 1.23
PVR-202ENST00000344956 ERICH3Q5RHP9 1530 aa22.72■■□□□ 1.23
PVR-202ENST00000344956 DIEXFQ68CQ4 756 aaKnown RBP22.69■■□□□ 1.22
PVR-202ENST00000344956 KIF27Q86VH2 1401 aa22.66■■□□□ 1.22
PVR-202ENST00000344956 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
PVR-202ENST00000344956 ARAP1Q96P48 1450 aa22.61■■□□□ 1.21
PVR-202ENST00000344956 ZNF316A6NFI3 1004 aaPredicted RBP22.54■■□□□ 1.2
PVR-202ENST00000344956 PRDM2Q13029 1718 aa22.53■■□□□ 1.2
PVR-202ENST00000344956 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
PVR-202ENST00000344956 CADPSQ9ULU8 1353 aa22.49■■□□□ 1.19
PVR-202ENST00000344956 CUX2O14529 1486 aa22.46■■□□□ 1.19
PVR-202ENST00000344956 ACIN1Q9UKV3 1341 aaKnown RBP22.44■■□□□ 1.18
PVR-202ENST00000344956 ARHGAP35Q9NRY4 1499 aa22.43■■□□□ 1.18
PVR-202ENST00000344956 NEUROD1Q13562 356 aa22.43■■□□□ 1.18
PVR-202ENST00000344956 IGF1RP08069 1367 aa22.42■■□□□ 1.18
PVR-202ENST00000344956 CC2D2AQ9P2K1 1620 aa22.38■■□□□ 1.17
PVR-202ENST00000344956 FGD5Q6ZNL6 1462 aa22.38■■□□□ 1.17
PVR-202ENST00000344956 CENPBP07199 599 aaPredicted RBP22.33■■□□□ 1.17
PVR-202ENST00000344956 CARMIL1Q5VZK9 1371 aa22.33■■□□□ 1.16
PVR-202ENST00000344956 RRBP1Q9P2E9 1410 aaKnown RBP22.32■■□□□ 1.16
PVR-202ENST00000344956 DHX57Q6P158 1386 aaKnown RBP22.3■■□□□ 1.16
PVR-202ENST00000344956 FANCD2Q9BXW9 1451 aa22.28■■□□□ 1.16
PVR-202ENST00000344956 CLSPNQ9HAW4 1339 aa22.25■■□□□ 1.15
PVR-202ENST00000344956 CCNB3Q8WWL7 1395 aa22.25■■□□□ 1.15
PVR-202ENST00000344956 MIER1Q8N108 512 aa22.22■■□□□ 1.15
PVR-202ENST00000344956 ITGAEP38570 1179 aa22.2■■□□□ 1.14
PVR-202ENST00000344956 GTF3C3Q9Y5Q9 886 aa22.19■■□□□ 1.14
PVR-202ENST00000344956 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
PVR-202ENST00000344956 RAD54L2Q9Y4B4 1467 aa22.17■■□□□ 1.14
PVR-202ENST00000344956 YTHDC1Q96MU7 727 aaKnown RBP22.15■■□□□ 1.14
PVR-202ENST00000344956 DNMBPQ6XZF7 1577 aa22.15■■□□□ 1.14
PVR-202ENST00000344956 NESP48681 1621 aa22.15■■□□□ 1.14
PVR-202ENST00000344956 MAP3K1Q13233 1512 aa22.14■■□□□ 1.13
PVR-202ENST00000344956 P3H3Q8IVL6 736 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms