RNA–Protein interactions for RNA: ENST00000374222.5

UBXN11-206, Transcript of UBX domain protein 11, humanhuman

APPRIS P4 TSL 5 BASIC

Gene UBXN11, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-206ENST00000374222 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
UBXN11-206ENST00000374222 CCDC180Q9P1Z9 1646 aa28.1■■■□□ 2.09
UBXN11-206ENST00000374222 ZCCHC6Q5VYS8 1495 aaKnown RBP26.95■■□□□ 1.9
UBXN11-206ENST00000374222 ABCC9O60706 1549 aa26.88■■□□□ 1.89
UBXN11-206ENST00000374222 DCAF8L2P0C7V8 631 aa26.74■■□□□ 1.87
UBXN11-206ENST00000374222 DCAF1Q9Y4B6 1507 aa26.54■■□□□ 1.84
UBXN11-206ENST00000374222 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
UBXN11-206ENST00000374222 NACADO15069 1562 aa26.25■■□□□ 1.79
UBXN11-206ENST00000374222 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
UBXN11-206ENST00000374222 RB1CC1Q8TDY2 1594 aa26.1■■□□□ 1.77
UBXN11-206ENST00000374222 SCRIBQ14160 1630 aa25.87■■□□□ 1.73
UBXN11-206ENST00000374222 UNC13AQ9UPW8 1703 aa25.56■■□□□ 1.68
UBXN11-206ENST00000374222 SUPT5HO00267 1087 aaKnown RBP25.36■■□□□ 1.65
UBXN11-206ENST00000374222 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.659e-7■■■□□ 16.4
UBXN11-206ENST00000374222 BICRAQ9NZM4 1560 aa25.32■■□□□ 1.64
UBXN11-206ENST00000374222 CECR2Q9BXF3 1484 aa25.04■■□□□ 1.6
UBXN11-206ENST00000374222 RSF1Q96T23 1441 aaPredicted RBP24.87■■□□□ 1.57
UBXN11-206ENST00000374222 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
UBXN11-206ENST00000374222 BAZ1AQ9NRL2 1556 aaPredicted RBP24.84■■□□□ 1.57
UBXN11-206ENST00000374222 SMARCA4P51532 1647 aa24.76■■□□□ 1.55
UBXN11-206ENST00000374222 CHIC1Q5VXU3 224 aa24.73■■□□□ 1.55
UBXN11-206ENST00000374222 WIZO95785 1651 aa24.63■■□□□ 1.53
UBXN11-206ENST00000374222 EIF4G1Q04637 1599 aaKnown RBP24.58■■□□□ 1.53
UBXN11-206ENST00000374222 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
UBXN11-206ENST00000374222 HRCP23327 699 aa24.44■■□□□ 1.5
UBXN11-206ENST00000374222 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
UBXN11-206ENST00000374222 SMARCA2P51531 1590 aa24.39■■□□□ 1.49
UBXN11-206ENST00000374222 TOP2AP11388 1531 aaKnown RBP24.34■■□□□ 1.49
UBXN11-206ENST00000374222 CC2D2AQ9P2K1 1620 aa24.29■■□□□ 1.48
UBXN11-206ENST00000374222 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
UBXN11-206ENST00000374222 NCAPD3P42695 1498 aa24.25■■□□□ 1.47
UBXN11-206ENST00000374222 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
UBXN11-206ENST00000374222 CCDC88BA6NC98 1476 aa24.12■■□□□ 1.45
UBXN11-206ENST00000374222 PCGF6Q9BYE7 350 aa24.03■■□□□ 1.44
UBXN11-206ENST00000374222 DNAJC5BQ9UF47 199 aa23.96■■□□□ 1.43
UBXN11-206ENST00000374222 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
UBXN11-206ENST00000374222 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
UBXN11-206ENST00000374222 TRIM41Q8WV44 630 aa23.8■■□□□ 1.4
UBXN11-206ENST00000374222 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
UBXN11-206ENST00000374222 CFTRP13569 1480 aa23.65■■□□□ 1.38
UBXN11-206ENST00000374222 PPARGC1BQ86YN6 1023 aaKnown RBP23.64■■□□□ 1.37
UBXN11-206ENST00000374222 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
UBXN11-206ENST00000374222 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
UBXN11-206ENST00000374222 NESP48681 1621 aa23.53■■□□□ 1.36
UBXN11-206ENST00000374222 PRDM2Q13029 1718 aa23.46■■□□□ 1.35
UBXN11-206ENST00000374222 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
UBXN11-206ENST00000374222 ZEB1P37275 1124 aaPredicted RBP23.43■■□□□ 1.34
UBXN11-206ENST00000374222 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
UBXN11-206ENST00000374222 FAM9AQ8IZU1 332 aaPredicted RBP23.37■■□□□ 1.33
UBXN11-206ENST00000374222 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
UBXN11-206ENST00000374222 SYNJ1O43426 1573 aa23.32■■□□□ 1.32
UBXN11-206ENST00000374222 PDS5BQ9NTI5 1447 aa23.3■■□□□ 1.32
UBXN11-206ENST00000374222 CUX1P39880 1505 aa23.25■■□□□ 1.31
UBXN11-206ENST00000374222 CEP164Q9UPV0 1460 aa23.24■■□□□ 1.31
UBXN11-206ENST00000374222 TOP2BQ02880 1626 aa23.23■■□□□ 1.31
UBXN11-206ENST00000374222 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
UBXN11-206ENST00000374222 BIVM-ERCC5R4GMW8 1640 aa23.19■■□□□ 1.3
UBXN11-206ENST00000374222 EEA1Q15075 1411 aa23.12■■□□□ 1.29
UBXN11-206ENST00000374222 SOGA1O94964 1423 aa23.11■■□□□ 1.29
UBXN11-206ENST00000374222 DNMBPQ6XZF7 1577 aa23.09■■□□□ 1.29
UBXN11-206ENST00000374222 MYT1Q01538 1121 aa23.09■■□□□ 1.29
UBXN11-206ENST00000374222 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
UBXN11-206ENST00000374222 TOPBP1Q92547 1522 aa23.08■■□□□ 1.29
UBXN11-206ENST00000374222 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
UBXN11-206ENST00000374222 RUSC2Q8N2Y8 1516 aa23.04■■□□□ 1.28
UBXN11-206ENST00000374222 FGD5Q6ZNL6 1462 aa23.03■■□□□ 1.28
UBXN11-206ENST00000374222 MRC2Q9UBG0 1479 aa23.01■■□□□ 1.27
UBXN11-206ENST00000374222 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
UBXN11-206ENST00000374222 POLA1P09884 1462 aaPredicted RBP22.96■■□□□ 1.27
UBXN11-206ENST00000374222 CSRNP3Q8WYN3 585 aa22.92■■□□□ 1.26
UBXN11-206ENST00000374222 TNIKQ9UKE5 1360 aa22.9■■□□□ 1.26
UBXN11-206ENST00000374222 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
UBXN11-206ENST00000374222 WDR62O43379 1518 aa22.89■■□□□ 1.25
UBXN11-206ENST00000374222 THOC2Q8NI27 1593 aaKnown RBP22.87■■□□□ 1.25
UBXN11-206ENST00000374222 SCAF1Q9H7N4 1312 aaKnown RBP22.86■■□□□ 1.25
UBXN11-206ENST00000374222 CEP162Q5TB80 1403 aa22.85■■□□□ 1.25
UBXN11-206ENST00000374222 CUX2O14529 1486 aa22.85■■□□□ 1.25
UBXN11-206ENST00000374222 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
UBXN11-206ENST00000374222 GOLGA3Q08378 1498 aa22.84■■□□□ 1.25
UBXN11-206ENST00000374222 ABCA10Q8WWZ4 1543 aa22.8■■□□□ 1.24
UBXN11-206ENST00000374222 KIF21BO75037 1637 aa22.8■■□□□ 1.24
UBXN11-206ENST00000374222 TARBP1Q13395 1621 aaKnown RBP22.74■■□□□ 1.23
UBXN11-206ENST00000374222 WDR97A6NE52 1622 aa22.73■■□□□ 1.23
UBXN11-206ENST00000374222 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
UBXN11-206ENST00000374222 IFT140Q96RY7 1462 aa22.69■■□□□ 1.22
UBXN11-206ENST00000374222 IGF1RP08069 1367 aa22.68■■□□□ 1.22
UBXN11-206ENST00000374222 UBTFP17480 764 aaKnown RBP22.65■■□□□ 1.22
UBXN11-206ENST00000374222 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
UBXN11-206ENST00000374222 GAPVD1Q14C86 1478 aa22.62■■□□□ 1.21
UBXN11-206ENST00000374222 PRXQ9BXM0 1461 aa22.61■■□□□ 1.21
UBXN11-206ENST00000374222 ZNF608Q9ULD9 1512 aaPredicted RBP22.61■■□□□ 1.21
UBXN11-206ENST00000374222 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.214e-14■■■■■ 52.8
UBXN11-206ENST00000374222 RAPGEF2Q9Y4G8 1499 aa22.61■■□□□ 1.21
UBXN11-206ENST00000374222 CARMIL1Q5VZK9 1371 aa22.56■■□□□ 1.2
UBXN11-206ENST00000374222 ERICH3Q5RHP9 1530 aa22.53■■□□□ 1.2
UBXN11-206ENST00000374222 CCER1Q8TC90 406 aaPredicted RBP22.52■■□□□ 1.2
UBXN11-206ENST00000374222 EIF4G3O43432 1585 aaKnown RBP22.49■■□□□ 1.19
UBXN11-206ENST00000374222 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
UBXN11-206ENST00000374222 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
UBXN11-206ENST00000374222 CUL7Q14999 1698 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms