RNA–Protein interactions for RNA: ENST00000550928.1

CR383656.13-201, humanhuman

TSL 3 BASIC

Gene CR383656.13, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR383656.13-201ENST00000550928 NISCHQ9Y2I1 1504 aa32.97■■■□□ 2.87
CR383656.13-201ENST00000550928 CCDC180Q9P1Z9 1646 aa29.34■■■□□ 2.29
CR383656.13-201ENST00000550928 ABCC9O60706 1549 aa29.02■■■□□ 2.24
CR383656.13-201ENST00000550928 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
CR383656.13-201ENST00000550928 DCAF8L2P0C7V8 631 aa27.77■■■□□ 2.04
CR383656.13-201ENST00000550928 NACADO15069 1562 aa27.7■■■□□ 2.03
CR383656.13-201ENST00000550928 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
CR383656.13-201ENST00000550928 ZCCHC6Q5VYS8 1495 aaKnown RBP27.37■■□□□ 1.97
CR383656.13-201ENST00000550928 DCAF1Q9Y4B6 1507 aa27.25■■□□□ 1.95
CR383656.13-201ENST00000550928 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
CR383656.13-201ENST00000550928 UNC13AQ9UPW8 1703 aa27.13■■□□□ 1.93
CR383656.13-201ENST00000550928 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
CR383656.13-201ENST00000550928 BICRAQ9NZM4 1560 aa26.96■■□□□ 1.91
CR383656.13-201ENST00000550928 SCRIBQ14160 1630 aa26.77■■□□□ 1.88
CR383656.13-201ENST00000550928 SHROOM4Q9ULL8 1493 aa26.61■■□□□ 1.85
CR383656.13-201ENST00000550928 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
CR383656.13-201ENST00000550928 CC2D2AQ9P2K1 1620 aa26.22■■□□□ 1.79
CR383656.13-201ENST00000550928 CECR2Q9BXF3 1484 aa26.11■■□□□ 1.77
CR383656.13-201ENST00000550928 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
CR383656.13-201ENST00000550928 SMARCA4P51532 1647 aa25.59■■□□□ 1.69
CR383656.13-201ENST00000550928 AEBP2Q6ZN18 517 aaPredicted RBP25.58■■□□□ 1.69
CR383656.13-201ENST00000550928 ATAD2BQ9ULI0 1458 aa25.57■■□□□ 1.68
CR383656.13-201ENST00000550928 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
CR383656.13-201ENST00000550928 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
CR383656.13-201ENST00000550928 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
CR383656.13-201ENST00000550928 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
CR383656.13-201ENST00000550928 PEG3Q9GZU2 1588 aa25.35■■□□□ 1.65
CR383656.13-201ENST00000550928 BAZ1BQ9UIG0 1483 aaKnown RBP25.31■■□□□ 1.64
CR383656.13-201ENST00000550928 WIZO95785 1651 aa25.1■■□□□ 1.61
CR383656.13-201ENST00000550928 RSF1Q96T23 1441 aaPredicted RBP25.05■■□□□ 1.6
CR383656.13-201ENST00000550928 NESP48681 1621 aa25.04■■□□□ 1.6
CR383656.13-201ENST00000550928 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
CR383656.13-201ENST00000550928 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
CR383656.13-201ENST00000550928 CADPSQ9ULU8 1353 aa24.86■■□□□ 1.57
CR383656.13-201ENST00000550928 CUX2O14529 1486 aa24.83■■□□□ 1.57
CR383656.13-201ENST00000550928 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
CR383656.13-201ENST00000550928 TOP2AP11388 1531 aaKnown RBP24.8■■□□□ 1.56
CR383656.13-201ENST00000550928 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
CR383656.13-201ENST00000550928 CHIC1Q5VXU3 224 aa24.65■■□□□ 1.54
CR383656.13-201ENST00000550928 THOC2Q8NI27 1593 aaKnown RBP24.65■■□□□ 1.54
CR383656.13-201ENST00000550928 CFTRP13569 1480 aa24.63■■□□□ 1.53
CR383656.13-201ENST00000550928 CCDC88BA6NC98 1476 aa24.58■■□□□ 1.52
CR383656.13-201ENST00000550928 FANCD2Q9BXW9 1451 aa24.53■■□□□ 1.52
CR383656.13-201ENST00000550928 MRC2Q9UBG0 1479 aa24.52■■□□□ 1.52
CR383656.13-201ENST00000550928 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
CR383656.13-201ENST00000550928 DNAJC5Q9H3Z4 198 aa24.48■■□□□ 1.51
CR383656.13-201ENST00000550928 WDR62O43379 1518 aa24.42■■□□□ 1.5
CR383656.13-201ENST00000550928 PRDM2Q13029 1718 aa24.33■■□□□ 1.49
CR383656.13-201ENST00000550928 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
CR383656.13-201ENST00000550928 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
CR383656.13-201ENST00000550928 ABCC8Q09428 1581 aa24.12■■□□□ 1.45
CR383656.13-201ENST00000550928 TOPBP1Q92547 1522 aa24.11■■□□□ 1.45
CR383656.13-201ENST00000550928 DNMBPQ6XZF7 1577 aa24.03■■□□□ 1.44
CR383656.13-201ENST00000550928 IFT140Q96RY7 1462 aa24.02■■□□□ 1.44
CR383656.13-201ENST00000550928 ZNF608Q9ULD9 1512 aaPredicted RBP23.94■■□□□ 1.42
CR383656.13-201ENST00000550928 OSCARQ8IYS5 282 aa23.89■■□□□ 1.41
CR383656.13-201ENST00000550928 POLA1P09884 1462 aaPredicted RBP23.88■■□□□ 1.41
CR383656.13-201ENST00000550928 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
CR383656.13-201ENST00000550928 SOGA1O94964 1423 aa23.84■■□□□ 1.41
CR383656.13-201ENST00000550928 CUX1P39880 1505 aa23.83■■□□□ 1.41
CR383656.13-201ENST00000550928 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.4
CR383656.13-201ENST00000550928 RAD54L2Q9Y4B4 1467 aa23.81■■□□□ 1.4
CR383656.13-201ENST00000550928 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
CR383656.13-201ENST00000550928 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
CR383656.13-201ENST00000550928 TDRD9Q8NDG6 1382 aaKnown RBP23.74■■□□□ 1.39
CR383656.13-201ENST00000550928 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
CR383656.13-201ENST00000550928 WRNQ14191 1432 aaPredicted RBP eCLIP23.61■■□□□ 1.37
CR383656.13-201ENST00000550928 FBLN2P98095 1184 aa23.61■■□□□ 1.37
CR383656.13-201ENST00000550928 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
CR383656.13-201ENST00000550928 GRIN2BQ13224 1484 aa23.55■■□□□ 1.36
CR383656.13-201ENST00000550928 TOP2BQ02880 1626 aa23.55■■□□□ 1.36
CR383656.13-201ENST00000550928 BIVM-ERCC5R4GMW8 1640 aa23.53■■□□□ 1.36
CR383656.13-201ENST00000550928 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
CR383656.13-201ENST00000550928 GAPVD1Q14C86 1478 aa23.53■■□□□ 1.36
CR383656.13-201ENST00000550928 CHD1O14646 1710 aa23.53■■□□□ 1.36
CR383656.13-201ENST00000550928 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
CR383656.13-201ENST00000550928 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
CR383656.13-201ENST00000550928 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
CR383656.13-201ENST00000550928 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
CR383656.13-201ENST00000550928 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
CR383656.13-201ENST00000550928 PBRM1Q86U86 1689 aa23.41■■□□□ 1.34
CR383656.13-201ENST00000550928 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
CR383656.13-201ENST00000550928 RIMBP3CA6NJZ7 1639 aa23.41■■□□□ 1.34
CR383656.13-201ENST00000550928 RIMBP3BA6NNM3 1639 aa23.41■■□□□ 1.34
CR383656.13-201ENST00000550928 RIMBP3Q9UFD9 1639 aa23.41■■□□□ 1.34
CR383656.13-201ENST00000550928 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
CR383656.13-201ENST00000550928 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
CR383656.13-201ENST00000550928 CYB5RLQ6IPT4 315 aa23.28■■□□□ 1.32
CR383656.13-201ENST00000550928 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
CR383656.13-201ENST00000550928 FHAD1B1AJZ9 1412 aa23.25■■□□□ 1.31
CR383656.13-201ENST00000550928 GRIN2AQ12879 1464 aa23.23■■□□□ 1.31
CR383656.13-201ENST00000550928 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
CR383656.13-201ENST00000550928 ARAP1Q96P48 1450 aa23.17■■□□□ 1.3
CR383656.13-201ENST00000550928 NUP160Q12769 1436 aa23.15■■□□□ 1.3
CR383656.13-201ENST00000550928 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
CR383656.13-201ENST00000550928 IGF1RP08069 1367 aa23.14■■□□□ 1.29
CR383656.13-201ENST00000550928 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
CR383656.13-201ENST00000550928 JPH4Q96JJ6 628 aa23.01■■□□□ 1.27
CR383656.13-201ENST00000550928 CARMIL1Q5VZK9 1371 aa22.98■■□□□ 1.27
CR383656.13-201ENST00000550928 ERCC6L2Q5T890 1561 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms