RNA–Protein interactions for RNA: ENST00000550447.5

PMEL-214, Transcript of premelanosome protein, humanhuman

TSL 3 BASIC

Gene PMEL, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-214ENST00000550447 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
PMEL-214ENST00000550447 ABCC9O60706 1549 aa30.07■■■□□ 2.4
PMEL-214ENST00000550447 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
PMEL-214ENST00000550447 DNAJC5BQ9UF47 199 aa28.87■■■□□ 2.21
PMEL-214ENST00000550447 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
PMEL-214ENST00000550447 NACADO15069 1562 aa27.89■■■□□ 2.05
PMEL-214ENST00000550447 PABPN1Q86U42 306 aaKnown RBP eCLIP27.82■■■□□ 2.04
PMEL-214ENST00000550447 UNC13AQ9UPW8 1703 aa27.74■■■□□ 2.03
PMEL-214ENST00000550447 BICRAQ9NZM4 1560 aa27.57■■■□□ 2
PMEL-214ENST00000550447 DCAF8L2P0C7V8 631 aa27.44■■□□□ 1.98
PMEL-214ENST00000550447 MYO15BQ96JP2 1530 aa27.26■■□□□ 1.95
PMEL-214ENST00000550447 CC2D2AQ9P2K1 1620 aa27.16■■□□□ 1.94
PMEL-214ENST00000550447 CECR2Q9BXF3 1484 aa27.15■■□□□ 1.94
PMEL-214ENST00000550447 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
PMEL-214ENST00000550447 DNAJC5Q9H3Z4 198 aa26.96■■□□□ 1.91
PMEL-214ENST00000550447 EIF4G1Q04637 1599 aaKnown RBP26.91■■□□□ 1.9
PMEL-214ENST00000550447 SCRIBQ14160 1630 aa26.73■■□□□ 1.87
PMEL-214ENST00000550447 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
PMEL-214ENST00000550447 DCAF1Q9Y4B6 1507 aa26.65■■□□□ 1.86
PMEL-214ENST00000550447 CUX2O14529 1486 aa26.19■■□□□ 1.78
PMEL-214ENST00000550447 ERCC6Q03468 1493 aa25.97■■□□□ 1.75
PMEL-214ENST00000550447 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
PMEL-214ENST00000550447 NESP48681 1621 aa25.66■■□□□ 1.7
PMEL-214ENST00000550447 THOC2Q8NI27 1593 aaKnown RBP25.6■■□□□ 1.69
PMEL-214ENST00000550447 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
PMEL-214ENST00000550447 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
PMEL-214ENST00000550447 TRIM41Q8WV44 630 aa25.48■■□□□ 1.67
PMEL-214ENST00000550447 SMARCA2P51531 1590 aa25.45■■□□□ 1.66
PMEL-214ENST00000550447 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
PMEL-214ENST00000550447 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
PMEL-214ENST00000550447 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
PMEL-214ENST00000550447 BAZ1BQ9UIG0 1483 aaKnown RBP25.28■■□□□ 1.64
PMEL-214ENST00000550447 PEG3Q9GZU2 1588 aa25.17■■□□□ 1.62
PMEL-214ENST00000550447 BAZ1AQ9NRL2 1556 aaPredicted RBP25.13■■□□□ 1.61
PMEL-214ENST00000550447 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
PMEL-214ENST00000550447 MRC2Q9UBG0 1479 aa25.02■■□□□ 1.6
PMEL-214ENST00000550447 WDR62O43379 1518 aa25.02■■□□□ 1.6
PMEL-214ENST00000550447 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
PMEL-214ENST00000550447 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
PMEL-214ENST00000550447 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
PMEL-214ENST00000550447 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
PMEL-214ENST00000550447 RIMBP3CA6NJZ7 1639 aa24.69■■□□□ 1.54
PMEL-214ENST00000550447 RIMBP3BA6NNM3 1639 aa24.69■■□□□ 1.54
PMEL-214ENST00000550447 RIMBP3Q9UFD9 1639 aa24.69■■□□□ 1.54
PMEL-214ENST00000550447 FANCD2Q9BXW9 1451 aa24.67■■□□□ 1.54
PMEL-214ENST00000550447 WIZO95785 1651 aa24.61■■□□□ 1.53
PMEL-214ENST00000550447 URB2Q14146 1524 aaKnown RBP24.56■■□□□ 1.52
PMEL-214ENST00000550447 ARHGEF11O15085 1522 aa24.52■■□□□ 1.52
PMEL-214ENST00000550447 CFTRP13569 1480 aa24.51■■□□□ 1.51
PMEL-214ENST00000550447 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
PMEL-214ENST00000550447 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
PMEL-214ENST00000550447 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
PMEL-214ENST00000550447 CYB5RLQ6IPT4 315 aa24.26■■□□□ 1.47
PMEL-214ENST00000550447 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
PMEL-214ENST00000550447 EIF4G3O43432 1585 aaKnown RBP24.24■■□□□ 1.47
PMEL-214ENST00000550447 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
PMEL-214ENST00000550447 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.46
PMEL-214ENST00000550447 CHD1O14646 1710 aa24.19■■□□□ 1.46
PMEL-214ENST00000550447 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
PMEL-214ENST00000550447 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
PMEL-214ENST00000550447 TARBP1Q13395 1621 aaKnown RBP24.02■■□□□ 1.44
PMEL-214ENST00000550447 AQRO60306 1485 aaKnown RBP eCLIP24.01■■□□□ 1.43
PMEL-214ENST00000550447 AEBP2Q6ZN18 517 aaPredicted RBP24■■□□□ 1.43
PMEL-214ENST00000550447 DNMBPQ6XZF7 1577 aa23.99■■□□□ 1.43
PMEL-214ENST00000550447 CCDC88BA6NC98 1476 aa23.94■■□□□ 1.42
PMEL-214ENST00000550447 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
PMEL-214ENST00000550447 FBLN2P98095 1184 aa23.9■■□□□ 1.42
PMEL-214ENST00000550447 CLASP1Q7Z460 1538 aa23.89■■□□□ 1.42
PMEL-214ENST00000550447 POLA1P09884 1462 aaPredicted RBP23.86■■□□□ 1.41
PMEL-214ENST00000550447 SNAPC4Q5SXM2 1469 aa23.78■■□□□ 1.4
PMEL-214ENST00000550447 RAD54L2Q9Y4B4 1467 aa23.77■■□□□ 1.4
PMEL-214ENST00000550447 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
PMEL-214ENST00000550447 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
PMEL-214ENST00000550447 WDR97A6NE52 1622 aa23.66■■□□□ 1.38
PMEL-214ENST00000550447 SOGA1O94964 1423 aa23.65■■□□□ 1.38
PMEL-214ENST00000550447 MAGI1Q96QZ7 1491 aaPredicted RBP23.64■■□□□ 1.38
PMEL-214ENST00000550447 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
PMEL-214ENST00000550447 FGD5Q6ZNL6 1462 aa23.6■■□□□ 1.37
PMEL-214ENST00000550447 CHMP7Q8WUX9 453 aaPredicted RBP23.59■■□□□ 1.37
PMEL-214ENST00000550447 SYNJ2O15056 1496 aa23.58■■□□□ 1.37
PMEL-214ENST00000550447 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
PMEL-214ENST00000550447 ERCC6L2Q5T890 1561 aa23.5■■□□□ 1.35
PMEL-214ENST00000550447 PBRM1Q86U86 1689 aa23.5■■□□□ 1.35
PMEL-214ENST00000550447 CUX1P39880 1505 aa23.49■■□□□ 1.35
PMEL-214ENST00000550447 KIF13AQ9H1H9 1805 aa23.39■■□□□ 1.33
PMEL-214ENST00000550447 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
PMEL-214ENST00000550447 CEP170Q5SW79 1584 aa23.33■■□□□ 1.33
PMEL-214ENST00000550447 GRIN2AQ12879 1464 aa23.3■■□□□ 1.32
PMEL-214ENST00000550447 SHROOM2Q13796 1616 aa23.27■■□□□ 1.32
PMEL-214ENST00000550447 ABCA10Q8WWZ4 1543 aa23.27■■□□□ 1.32
PMEL-214ENST00000550447 NUP160Q12769 1436 aa23.25■■□□□ 1.31
PMEL-214ENST00000550447 ADAMTS12P58397 1594 aa23.24■■□□□ 1.31
PMEL-214ENST00000550447 ILDR1Q86SU0 546 aaPredicted RBP23.15■■□□□ 1.3
PMEL-214ENST00000550447 KDM4FA0A1W2PPD8 638 aa23.1■■□□□ 1.29
PMEL-214ENST00000550447 ABCC10Q5T3U5 1492 aa23.09■■□□□ 1.29
PMEL-214ENST00000550447 DIP2BQ9P265 1576 aa23.08■■□□□ 1.29
PMEL-214ENST00000550447 FHAD1B1AJZ9 1412 aa23.04■■□□□ 1.28
PMEL-214ENST00000550447 PRG4Q92954 1404 aaPredicted RBP23.04■■□□□ 1.28
PMEL-214ENST00000550447 KDM6BO15054 1643 aa23.04■■□□□ 1.28
PMEL-214ENST00000550447 MAPKBP1O60336 1514 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms