RNA–Protein interactions for RNA: ENST00000304786.11

SRP9-201, Transcript of signal recognition particle 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP9, Length 1,480 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9-201ENST00000304786 NISCHQ9Y2I1 1504 aa32.83■■■□□ 2.85
SRP9-201ENST00000304786 CCDC180Q9P1Z9 1646 aa29.12■■■□□ 2.25
SRP9-201ENST00000304786 ABCC9O60706 1549 aa28.63■■■□□ 2.17
SRP9-201ENST00000304786 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
SRP9-201ENST00000304786 RB1CC1Q8TDY2 1594 aa27.43■■□□□ 1.98
SRP9-201ENST00000304786 NACADO15069 1562 aa27.39■■□□□ 1.97
SRP9-201ENST00000304786 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
SRP9-201ENST00000304786 MYO15BQ96JP2 1530 aa27.17■■□□□ 1.94
SRP9-201ENST00000304786 DCAF1Q9Y4B6 1507 aa27.08■■□□□ 1.93
SRP9-201ENST00000304786 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
SRP9-201ENST00000304786 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
SRP9-201ENST00000304786 BICRAQ9NZM4 1560 aa26.7■■□□□ 1.86
SRP9-201ENST00000304786 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
SRP9-201ENST00000304786 DNAJC5BQ9UF47 199 aa26.38■■□□□ 1.81
SRP9-201ENST00000304786 SHROOM4Q9ULL8 1493 aa26.22■■□□□ 1.79
SRP9-201ENST00000304786 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.74
SRP9-201ENST00000304786 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
SRP9-201ENST00000304786 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
SRP9-201ENST00000304786 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
SRP9-201ENST00000304786 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
SRP9-201ENST00000304786 MROH2BQ7Z745 1585 aa25.36■■□□□ 1.65
SRP9-201ENST00000304786 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
SRP9-201ENST00000304786 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
SRP9-201ENST00000304786 SMARCA2P51531 1590 aa25.25■■□□□ 1.63
SRP9-201ENST00000304786 PEG3Q9GZU2 1588 aa25.18■■□□□ 1.62
SRP9-201ENST00000304786 HMGXB3Q12766 1538 aa25.14■■□□□ 1.62
SRP9-201ENST00000304786 BAZ1BQ9UIG0 1483 aaKnown RBP25.11■■□□□ 1.61
SRP9-201ENST00000304786 WIZO95785 1651 aa25.1■■□□□ 1.61
SRP9-201ENST00000304786 RSF1Q96T23 1441 aaPredicted RBP25.04■■□□□ 1.6
SRP9-201ENST00000304786 NESP48681 1621 aa24.81■■□□□ 1.56
SRP9-201ENST00000304786 TOP2AP11388 1531 aaKnown RBP24.75■■□□□ 1.55
SRP9-201ENST00000304786 ERCC6Q03468 1493 aa24.61■■□□□ 1.53
SRP9-201ENST00000304786 LAMC3Q9Y6N6 1575 aa24.6■■□□□ 1.53
SRP9-201ENST00000304786 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
SRP9-201ENST00000304786 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
SRP9-201ENST00000304786 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
SRP9-201ENST00000304786 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
SRP9-201ENST00000304786 PDS5BQ9NTI5 1447 aa24.45■■□□□ 1.5
SRP9-201ENST00000304786 CFTRP13569 1480 aa24.43■■□□□ 1.5
SRP9-201ENST00000304786 THOC2Q8NI27 1593 aaKnown RBP24.35■■□□□ 1.49
SRP9-201ENST00000304786 CUX2O14529 1486 aa24.31■■□□□ 1.48
SRP9-201ENST00000304786 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
SRP9-201ENST00000304786 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
SRP9-201ENST00000304786 MRC2Q9UBG0 1479 aa24.22■■□□□ 1.47
SRP9-201ENST00000304786 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
SRP9-201ENST00000304786 WDR62O43379 1518 aa24.14■■□□□ 1.45
SRP9-201ENST00000304786 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
SRP9-201ENST00000304786 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
SRP9-201ENST00000304786 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
SRP9-201ENST00000304786 ABCC8Q09428 1581 aa23.83■■□□□ 1.4
SRP9-201ENST00000304786 CUX1P39880 1505 aa23.78■■□□□ 1.4
SRP9-201ENST00000304786 POLA1P09884 1462 aaPredicted RBP23.73■■□□□ 1.39
SRP9-201ENST00000304786 IFT140Q96RY7 1462 aa23.73■■□□□ 1.39
SRP9-201ENST00000304786 ZNF608Q9ULD9 1512 aaPredicted RBP23.73■■□□□ 1.39
SRP9-201ENST00000304786 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
SRP9-201ENST00000304786 FGD5Q6ZNL6 1462 aa23.68■■□□□ 1.38
SRP9-201ENST00000304786 TARBP1Q13395 1621 aaKnown RBP23.67■■□□□ 1.38
SRP9-201ENST00000304786 DNAJC5Q9H3Z4 198 aa23.65■■□□□ 1.38
SRP9-201ENST00000304786 SOGA1O94964 1423 aa23.63■■□□□ 1.37
SRP9-201ENST00000304786 AQRO60306 1485 aaKnown RBP eCLIP23.59■■□□□ 1.375e-11■□□□□ 10.8
SRP9-201ENST00000304786 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
SRP9-201ENST00000304786 WRNQ14191 1432 aaPredicted RBP eCLIP23.57■■□□□ 1.36
SRP9-201ENST00000304786 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
SRP9-201ENST00000304786 TDRD9Q8NDG6 1382 aaKnown RBP23.54■■□□□ 1.36
SRP9-201ENST00000304786 BIVM-ERCC5R4GMW8 1640 aa23.52■■□□□ 1.36
SRP9-201ENST00000304786 TOP2BQ02880 1626 aa23.51■■□□□ 1.35
SRP9-201ENST00000304786 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
SRP9-201ENST00000304786 ABCA10Q8WWZ4 1543 aa23.41■■□□□ 1.34
SRP9-201ENST00000304786 OSCARQ8IYS5 282 aa23.36■■□□□ 1.33
SRP9-201ENST00000304786 GAPVD1Q14C86 1478 aa23.34■■□□□ 1.33
SRP9-201ENST00000304786 SNAPC4Q5SXM2 1469 aa23.34■■□□□ 1.33
SRP9-201ENST00000304786 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
SRP9-201ENST00000304786 GRIN2BQ13224 1484 aa23.32■■□□□ 1.32
SRP9-201ENST00000304786 FBLN2P98095 1184 aa23.3■■□□□ 1.32
SRP9-201ENST00000304786 CHD1O14646 1710 aa23.3■■□□□ 1.32
SRP9-201ENST00000304786 PBRM1Q86U86 1689 aa23.3■■□□□ 1.32
SRP9-201ENST00000304786 MAGI1Q96QZ7 1491 aaPredicted RBP23.23■■□□□ 1.31
SRP9-201ENST00000304786 CHMP7Q8WUX9 453 aaPredicted RBP23.19■■□□□ 1.3
SRP9-201ENST00000304786 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
SRP9-201ENST00000304786 ADAMTS12P58397 1594 aa23.11■■□□□ 1.29
SRP9-201ENST00000304786 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
SRP9-201ENST00000304786 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
SRP9-201ENST00000304786 FHAD1B1AJZ9 1412 aa23.06■■□□□ 1.28
SRP9-201ENST00000304786 TRIM41Q8WV44 630 aa23.05■■□□□ 1.28
SRP9-201ENST00000304786 GRIN2AQ12879 1464 aa23.04■■□□□ 1.28
SRP9-201ENST00000304786 IGF1RP08069 1367 aa23.03■■□□□ 1.28
SRP9-201ENST00000304786 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
SRP9-201ENST00000304786 RIMBP3CA6NJZ7 1639 aa23.01■■□□□ 1.27
SRP9-201ENST00000304786 RIMBP3BA6NNM3 1639 aa23.01■■□□□ 1.27
SRP9-201ENST00000304786 RIMBP3Q9UFD9 1639 aa23.01■■□□□ 1.27
SRP9-201ENST00000304786 RUSC2Q8N2Y8 1516 aa23■■□□□ 1.27
SRP9-201ENST00000304786 ARHGEF11O15085 1522 aa22.98■■□□□ 1.27
SRP9-201ENST00000304786 CEP170Q5SW79 1584 aa22.96■■□□□ 1.27
SRP9-201ENST00000304786 NUP160Q12769 1436 aa22.93■■□□□ 1.26
SRP9-201ENST00000304786 CUL7Q14999 1698 aa22.88■■□□□ 1.25
SRP9-201ENST00000304786 CARMIL1Q5VZK9 1371 aa22.88■■□□□ 1.25
SRP9-201ENST00000304786 CYB5RLQ6IPT4 315 aa22.83■■□□□ 1.25
SRP9-201ENST00000304786 ARAP1Q96P48 1450 aa22.83■■□□□ 1.24
SRP9-201ENST00000304786 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
SRP9-201ENST00000304786 ERCC6L2Q5T890 1561 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms