RNA–Protein interactions for RNA: ENST00000415389.6

HTR3E-202, Transcript of 5-hydroxytryptamine receptor 3E, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HTR3E, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3E-202ENST00000415389 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
HTR3E-202ENST00000415389 CCDC180Q9P1Z9 1646 aa26.73■■□□□ 1.87
HTR3E-202ENST00000415389 ZCCHC6Q5VYS8 1495 aaKnown RBP26.53■■□□□ 1.84
HTR3E-202ENST00000415389 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
HTR3E-202ENST00000415389 SUPT5HO00267 1087 aaKnown RBP25.98■■□□□ 1.75
HTR3E-202ENST00000415389 DCAF1Q9Y4B6 1507 aa25.84■■□□□ 1.73
HTR3E-202ENST00000415389 DCAF8L2P0C7V8 631 aa25.68■■□□□ 1.7
HTR3E-202ENST00000415389 CHIC1Q5VXU3 224 aa25.4■■□□□ 1.66
HTR3E-202ENST00000415389 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
HTR3E-202ENST00000415389 ABCC9O60706 1549 aa25.03■■□□□ 1.6
HTR3E-202ENST00000415389 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
HTR3E-202ENST00000415389 RSF1Q96T23 1441 aaPredicted RBP24.77■■□□□ 1.56
HTR3E-202ENST00000415389 NACADO15069 1562 aa24.68■■□□□ 1.54
HTR3E-202ENST00000415389 HRCP23327 699 aa24.66■■□□□ 1.54
HTR3E-202ENST00000415389 RB1CC1Q8TDY2 1594 aa24.55■■□□□ 1.52
HTR3E-202ENST00000415389 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
HTR3E-202ENST00000415389 PCGF6Q9BYE7 350 aa24.52■■□□□ 1.52
HTR3E-202ENST00000415389 CECR2Q9BXF3 1484 aa24.34■■□□□ 1.49
HTR3E-202ENST00000415389 TRIM41Q8WV44 630 aa24.3■■□□□ 1.48
HTR3E-202ENST00000415389 MROH2BQ7Z745 1585 aa24.3■■□□□ 1.48
HTR3E-202ENST00000415389 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
HTR3E-202ENST00000415389 WIZO95785 1651 aa24.15■■□□□ 1.46
HTR3E-202ENST00000415389 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
HTR3E-202ENST00000415389 PPARGC1BQ86YN6 1023 aaKnown RBP23.96■■□□□ 1.43
HTR3E-202ENST00000415389 FAM9AQ8IZU1 332 aaPredicted RBP23.96■■□□□ 1.43
HTR3E-202ENST00000415389 EIF4G1Q04637 1599 aaKnown RBP23.94■■□□□ 1.42
HTR3E-202ENST00000415389 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
HTR3E-202ENST00000415389 SMARCA4P51532 1647 aa23.85■■□□□ 1.41
HTR3E-202ENST00000415389 UNC13AQ9UPW8 1703 aa23.81■■□□□ 1.4
HTR3E-202ENST00000415389 ZEB1P37275 1124 aaPredicted RBP23.75■■□□□ 1.39
HTR3E-202ENST00000415389 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
HTR3E-202ENST00000415389 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
HTR3E-202ENST00000415389 EHMT2Q96KQ7 1210 aa23.63■■□□□ 1.37
HTR3E-202ENST00000415389 ABCC8Q09428 1581 aa23.57■■□□□ 1.36
HTR3E-202ENST00000415389 BICRAQ9NZM4 1560 aa23.54■■□□□ 1.36
HTR3E-202ENST00000415389 PEG3Q9GZU2 1588 aa23.48■■□□□ 1.35
HTR3E-202ENST00000415389 EEA1Q15075 1411 aa23.44■■□□□ 1.34
HTR3E-202ENST00000415389 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
HTR3E-202ENST00000415389 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
HTR3E-202ENST00000415389 SOGA1O94964 1423 aa23.37■■□□□ 1.33
HTR3E-202ENST00000415389 TNIKQ9UKE5 1360 aa23.35■■□□□ 1.33
HTR3E-202ENST00000415389 CEP162Q5TB80 1403 aa23.33■■□□□ 1.32
HTR3E-202ENST00000415389 CSRNP3Q8WYN3 585 aa23.29■■□□□ 1.32
HTR3E-202ENST00000415389 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
HTR3E-202ENST00000415389 ATAD2BQ9ULI0 1458 aa23.22■■□□□ 1.31
HTR3E-202ENST00000415389 GOLGA3Q08378 1498 aa23.2■■□□□ 1.31
HTR3E-202ENST00000415389 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
HTR3E-202ENST00000415389 SYNJ1O43426 1573 aa23.13■■□□□ 1.29
HTR3E-202ENST00000415389 UBTFP17480 764 aaKnown RBP23.11■■□□□ 1.29
HTR3E-202ENST00000415389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.09■■□□□ 1.29
HTR3E-202ENST00000415389 KIF21BO75037 1637 aa23.09■■□□□ 1.29
HTR3E-202ENST00000415389 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.29
HTR3E-202ENST00000415389 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
HTR3E-202ENST00000415389 TOP2BQ02880 1626 aa22.91■■□□□ 1.26
HTR3E-202ENST00000415389 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
HTR3E-202ENST00000415389 CLIP1P30622 1438 aa22.89■■□□□ 1.26
HTR3E-202ENST00000415389 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
HTR3E-202ENST00000415389 HMGXB3Q12766 1538 aa22.84■■□□□ 1.25
HTR3E-202ENST00000415389 VPS8Q8N3P4 1428 aa22.83■■□□□ 1.25
HTR3E-202ENST00000415389 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
HTR3E-202ENST00000415389 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
HTR3E-202ENST00000415389 ERICH3Q5RHP9 1530 aa22.73■■□□□ 1.23
HTR3E-202ENST00000415389 PRXQ9BXM0 1461 aa22.69■■□□□ 1.22
HTR3E-202ENST00000415389 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
HTR3E-202ENST00000415389 APLP2Q06481 763 aa22.65■■□□□ 1.22
HTR3E-202ENST00000415389 SCAF1Q9H7N4 1312 aaKnown RBP22.64■■□□□ 1.22
HTR3E-202ENST00000415389 CUX1P39880 1505 aa22.63■■□□□ 1.21
HTR3E-202ENST00000415389 CFTRP13569 1480 aa22.62■■□□□ 1.21
HTR3E-202ENST00000415389 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
HTR3E-202ENST00000415389 HNRNPUL2Q1KMD3 747 aaKnown RBP22.56■■□□□ 1.2
HTR3E-202ENST00000415389 ZNF316A6NFI3 1004 aaPredicted RBP22.54■■□□□ 1.2
HTR3E-202ENST00000415389 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
HTR3E-202ENST00000415389 ACIN1Q9UKV3 1341 aaKnown RBP22.51■■□□□ 1.19
HTR3E-202ENST00000415389 RANGAP1P46060 587 aaPredicted RBP22.48■■□□□ 1.19
HTR3E-202ENST00000415389 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
HTR3E-202ENST00000415389 CENPBP07199 599 aaPredicted RBP22.42■■□□□ 1.18
HTR3E-202ENST00000415389 NEUROD1Q13562 356 aa22.4■■□□□ 1.18
HTR3E-202ENST00000415389 CLSPNQ9HAW4 1339 aa22.37■■□□□ 1.17
HTR3E-202ENST00000415389 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
HTR3E-202ENST00000415389 ARHGAP35Q9NRY4 1499 aa22.34■■□□□ 1.17
HTR3E-202ENST00000415389 CADPSQ9ULU8 1353 aa22.34■■□□□ 1.17
HTR3E-202ENST00000415389 RRBP1Q9P2E9 1410 aaKnown RBP22.33■■□□□ 1.17
HTR3E-202ENST00000415389 KANK4Q5T7N3 995 aaPredicted RBP22.33■■□□□ 1.16
HTR3E-202ENST00000415389 IGF1RP08069 1367 aa22.29■■□□□ 1.16
HTR3E-202ENST00000415389 CUX2O14529 1486 aa22.29■■□□□ 1.16
HTR3E-202ENST00000415389 DHX57Q6P158 1386 aaKnown RBP22.26■■□□□ 1.15
HTR3E-202ENST00000415389 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
HTR3E-202ENST00000415389 MAP3K1Q13233 1512 aa22.21■■□□□ 1.15
HTR3E-202ENST00000415389 CARMIL1Q5VZK9 1371 aa22.19■■□□□ 1.14
HTR3E-202ENST00000415389 CCNB3Q8WWL7 1395 aa22.19■■□□□ 1.14
HTR3E-202ENST00000415389 GTF3C3Q9Y5Q9 886 aa22.18■■□□□ 1.14
HTR3E-202ENST00000415389 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.13
HTR3E-202ENST00000415389 MIER1Q8N108 512 aa22.14■■□□□ 1.13
HTR3E-202ENST00000415389 TIAM1Q13009 1591 aa22.12■■□□□ 1.13
HTR3E-202ENST00000415389 FANCD2Q9BXW9 1451 aa22.1■■□□□ 1.13
HTR3E-202ENST00000415389 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
HTR3E-202ENST00000415389 FHAD1B1AJZ9 1412 aa22.05■■□□□ 1.12
HTR3E-202ENST00000415389 LRRC9Q6ZRR7 1453 aa22.03■■□□□ 1.12
HTR3E-202ENST00000415389 ABCA10Q8WWZ4 1543 aa22.03■■□□□ 1.12
HTR3E-202ENST00000415389 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms