RNA–Protein interactions for RNA: ENST00000537350.5

RCSD1-206, Transcript of RCSD domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RCSD1, Length 3,044 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCSD1-206ENST00000537350 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
RCSD1-206ENST00000537350 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
RCSD1-206ENST00000537350 SHROOM4Q9ULL8 1493 aa26.92■■□□□ 1.9
RCSD1-206ENST00000537350 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
RCSD1-206ENST00000537350 ZCCHC6Q5VYS8 1495 aaKnown RBP26.77■■□□□ 1.88
RCSD1-206ENST00000537350 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
RCSD1-206ENST00000537350 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
RCSD1-206ENST00000537350 ABCC9O60706 1549 aa26.02■■□□□ 1.76
RCSD1-206ENST00000537350 CHIC1Q5VXU3 224 aa25.8■■□□□ 1.72
RCSD1-206ENST00000537350 MYO15BQ96JP2 1530 aa25.73■■□□□ 1.71
RCSD1-206ENST00000537350 SCRIBQ14160 1630 aa25.58■■□□□ 1.68
RCSD1-206ENST00000537350 NACADO15069 1562 aa25.46■■□□□ 1.67
RCSD1-206ENST00000537350 HRCP23327 699 aa25.31■■□□□ 1.64
RCSD1-206ENST00000537350 PCGF6Q9BYE7 350 aa25.23■■□□□ 1.63
RCSD1-206ENST00000537350 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.63
RCSD1-206ENST00000537350 LOC105371045A0A1W2PR82 267 aa25.08■■□□□ 1.61
RCSD1-206ENST00000537350 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
RCSD1-206ENST00000537350 CECR2Q9BXF3 1484 aa24.92■■□□□ 1.58
RCSD1-206ENST00000537350 PABPN1Q86U42 306 aaKnown RBP eCLIP24.82■■□□□ 1.56
RCSD1-206ENST00000537350 PPARGC1BQ86YN6 1023 aaKnown RBP24.81■■□□□ 1.56
RCSD1-206ENST00000537350 MROH2BQ7Z745 1585 aa24.74■■□□□ 1.55
RCSD1-206ENST00000537350 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
RCSD1-206ENST00000537350 TRIM26Q12899 539 aaPredicted RBP24.66■■□□□ 1.54
RCSD1-206ENST00000537350 TRIM41Q8WV44 630 aa24.63■■□□□ 1.53
RCSD1-206ENST00000537350 PELP1Q8IZL8 1130 aaKnown RBP24.57■■□□□ 1.52
RCSD1-206ENST00000537350 WIZO95785 1651 aa24.56■■□□□ 1.52
RCSD1-206ENST00000537350 BAZ1AQ9NRL2 1556 aaPredicted RBP24.51■■□□□ 1.51
RCSD1-206ENST00000537350 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
RCSD1-206ENST00000537350 FAM9AQ8IZU1 332 aaPredicted RBP24.49■■□□□ 1.51
RCSD1-206ENST00000537350 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
RCSD1-206ENST00000537350 EHMT2Q96KQ7 1210 aa24.32■■□□□ 1.48
RCSD1-206ENST00000537350 ZEB1P37275 1124 aaPredicted RBP24.18■■□□□ 1.46
RCSD1-206ENST00000537350 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.46
RCSD1-206ENST00000537350 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.45
RCSD1-206ENST00000537350 SMARCA2P51531 1590 aa23.99■■□□□ 1.43
RCSD1-206ENST00000537350 ATAD2BQ9ULI0 1458 aa23.95■■□□□ 1.42
RCSD1-206ENST00000537350 MYT1Q01538 1121 aa23.92■■□□□ 1.42
RCSD1-206ENST00000537350 EIF4G1Q04637 1599 aaKnown RBP23.92■■□□□ 1.42
RCSD1-206ENST00000537350 PEG3Q9GZU2 1588 aa23.88■■□□□ 1.41
RCSD1-206ENST00000537350 BAZ1BQ9UIG0 1483 aaKnown RBP23.86■■□□□ 1.41
RCSD1-206ENST00000537350 ABCC8Q09428 1581 aa23.8■■□□□ 1.4
RCSD1-206ENST00000537350 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.69■■□□□ 1.38
RCSD1-206ENST00000537350 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
RCSD1-206ENST00000537350 SOGA1O94964 1423 aa23.6■■□□□ 1.37
RCSD1-206ENST00000537350 NCAPD3P42695 1498 aa23.59■■□□□ 1.37
RCSD1-206ENST00000537350 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.37
RCSD1-206ENST00000537350 CEP162Q5TB80 1403 aa23.57■■□□□ 1.36
RCSD1-206ENST00000537350 WRNQ14191 1432 aaPredicted RBP eCLIP23.54■■□□□ 1.36
RCSD1-206ENST00000537350 TNIKQ9UKE5 1360 aa23.5■■□□□ 1.35
RCSD1-206ENST00000537350 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
RCSD1-206ENST00000537350 HMGXB3Q12766 1538 aa23.48■■□□□ 1.35
RCSD1-206ENST00000537350 RUSC2Q8N2Y8 1516 aa23.47■■□□□ 1.35
RCSD1-206ENST00000537350 UBTFP17480 764 aaKnown RBP23.46■■□□□ 1.35
RCSD1-206ENST00000537350 EEA1Q15075 1411 aa23.45■■□□□ 1.34
RCSD1-206ENST00000537350 SCAF1Q9H7N4 1312 aaKnown RBP23.44■■□□□ 1.34
RCSD1-206ENST00000537350 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
RCSD1-206ENST00000537350 CC2D2AQ9P2K1 1620 aa23.35■■□□□ 1.33
RCSD1-206ENST00000537350 GOLGA3Q08378 1498 aa23.33■■□□□ 1.33
RCSD1-206ENST00000537350 DIEXFQ68CQ4 756 aaKnown RBP23.25■■□□□ 1.31
RCSD1-206ENST00000537350 CFTRP13569 1480 aa23.21■■□□□ 1.31
RCSD1-206ENST00000537350 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
RCSD1-206ENST00000537350 ACIN1Q9UKV3 1341 aaKnown RBP23.16■■□□□ 1.3
RCSD1-206ENST00000537350 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
RCSD1-206ENST00000537350 NEUROD1Q13562 356 aa23.13■■□□□ 1.29
RCSD1-206ENST00000537350 KIF21BO75037 1637 aa23.1■■□□□ 1.29
RCSD1-206ENST00000537350 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
RCSD1-206ENST00000537350 CLIP1P30622 1438 aa23.09■■□□□ 1.29
RCSD1-206ENST00000537350 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
RCSD1-206ENST00000537350 CUX1P39880 1505 aa23.06■■□□□ 1.28
RCSD1-206ENST00000537350 HNRNPUL2Q1KMD3 747 aaKnown RBP23.06■■□□□ 1.28
RCSD1-206ENST00000537350 RANGAP1P46060 587 aaPredicted RBP23.03■■□□□ 1.28
RCSD1-206ENST00000537350 ZNF316A6NFI3 1004 aaPredicted RBP23.02■■□□□ 1.28
RCSD1-206ENST00000537350 CENPBP07199 599 aaPredicted RBP23■■□□□ 1.27
RCSD1-206ENST00000537350 RAPGEF2Q9Y4G8 1499 aa23■■□□□ 1.27
RCSD1-206ENST00000537350 VPS8Q8N3P4 1428 aa23■■□□□ 1.27
RCSD1-206ENST00000537350 BIVM-ERCC5R4GMW8 1640 aa22.99■■□□□ 1.27
RCSD1-206ENST00000537350 APLP2Q06481 763 aa22.97■■□□□ 1.27
RCSD1-206ENST00000537350 NESP48681 1621 aa22.96■■□□□ 1.27
RCSD1-206ENST00000537350 GTF3C3Q9Y5Q9 886 aa22.92■■□□□ 1.26
RCSD1-206ENST00000537350 FANCD2Q9BXW9 1451 aa22.89■■□□□ 1.26
RCSD1-206ENST00000537350 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
RCSD1-206ENST00000537350 KIF27Q86VH2 1401 aa22.85■■□□□ 1.25
RCSD1-206ENST00000537350 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
RCSD1-206ENST00000537350 CUX2O14529 1486 aa22.78■■□□□ 1.24
RCSD1-206ENST00000537350 YTHDC1Q96MU7 727 aaKnown RBP22.76■■□□□ 1.23
RCSD1-206ENST00000537350 PRXQ9BXM0 1461 aa22.73■■□□□ 1.23
RCSD1-206ENST00000537350 MIER1Q8N108 512 aa22.73■■□□□ 1.23
RCSD1-206ENST00000537350 ERICH3Q5RHP9 1530 aa22.7■■□□□ 1.23
RCSD1-206ENST00000537350 ARAP1Q96P48 1450 aa22.68■■□□□ 1.22
RCSD1-206ENST00000537350 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
RCSD1-206ENST00000537350 IGF1RP08069 1367 aa22.66■■□□□ 1.22
RCSD1-206ENST00000537350 LAMC3Q9Y6N6 1575 aa22.66■■□□□ 1.22
RCSD1-206ENST00000537350 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
RCSD1-206ENST00000537350 KANK4Q5T7N3 995 aaPredicted RBP22.65■■□□□ 1.22
RCSD1-206ENST00000537350 PDS5BQ9NTI5 1447 aa22.62■■□□□ 1.21
RCSD1-206ENST00000537350 DNMBPQ6XZF7 1577 aa22.62■■□□□ 1.21
RCSD1-206ENST00000537350 POLA1P09884 1462 aaPredicted RBP22.6■■□□□ 1.21
RCSD1-206ENST00000537350 CARMIL1Q5VZK9 1371 aa22.58■■□□□ 1.21
RCSD1-206ENST00000537350 DHX57Q6P158 1386 aaKnown RBP22.57■■□□□ 1.2
RCSD1-206ENST00000537350 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms