RNA–Protein interactions for RNA: ENST00000400404.1

SKOR2-201, Transcript of SKI family transcriptional corepressor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKOR2, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR2-201ENST00000400404 NISCHQ9Y2I1 1504 aa32.69■■■□□ 2.82
SKOR2-201ENST00000400404 CCDC180Q9P1Z9 1646 aa29.22■■■□□ 2.27
SKOR2-201ENST00000400404 ABCC9O60706 1549 aa29.04■■■□□ 2.24
SKOR2-201ENST00000400404 RB1CC1Q8TDY2 1594 aa27.63■■■□□ 2.01
SKOR2-201ENST00000400404 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
SKOR2-201ENST00000400404 NACADO15069 1562 aa27.52■■■□□ 2
SKOR2-201ENST00000400404 MYO15BQ96JP2 1530 aa27.31■■□□□ 1.96
SKOR2-201ENST00000400404 ZCCHC6Q5VYS8 1495 aaKnown RBP27.19■■□□□ 1.94
SKOR2-201ENST00000400404 DNAJC5BQ9UF47 199 aa27.18■■□□□ 1.94
SKOR2-201ENST00000400404 PABPN1Q86U42 306 aaKnown RBP eCLIP27.15■■□□□ 1.94
SKOR2-201ENST00000400404 DCAF1Q9Y4B6 1507 aa27.06■■□□□ 1.92
SKOR2-201ENST00000400404 UNC13AQ9UPW8 1703 aa26.99■■□□□ 1.91
SKOR2-201ENST00000400404 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
SKOR2-201ENST00000400404 SCRIBQ14160 1630 aa26.61■■□□□ 1.85
SKOR2-201ENST00000400404 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
SKOR2-201ENST00000400404 CC2D2AQ9P2K1 1620 aa26.17■■□□□ 1.78
SKOR2-201ENST00000400404 EIF4G1Q04637 1599 aaKnown RBP26.16■■□□□ 1.78
SKOR2-201ENST00000400404 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
SKOR2-201ENST00000400404 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
SKOR2-201ENST00000400404 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
SKOR2-201ENST00000400404 ATAD2BQ9ULI0 1458 aa25.37■■□□□ 1.65
SKOR2-201ENST00000400404 BAZ1AQ9NRL2 1556 aaPredicted RBP25.36■■□□□ 1.65
SKOR2-201ENST00000400404 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
SKOR2-201ENST00000400404 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
SKOR2-201ENST00000400404 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
SKOR2-201ENST00000400404 MROH2BQ7Z745 1585 aa25.19■■□□□ 1.62
SKOR2-201ENST00000400404 BAZ1BQ9UIG0 1483 aaKnown RBP25.14■■□□□ 1.61
SKOR2-201ENST00000400404 ERCC6Q03468 1493 aa25.08■■□□□ 1.6
SKOR2-201ENST00000400404 NESP48681 1621 aa24.97■■□□□ 1.59
SKOR2-201ENST00000400404 CUX2O14529 1486 aa24.94■■□□□ 1.58
SKOR2-201ENST00000400404 WIZO95785 1651 aa24.88■■□□□ 1.57
SKOR2-201ENST00000400404 DNAJC5Q9H3Z4 198 aa24.87■■□□□ 1.57
SKOR2-201ENST00000400404 RSF1Q96T23 1441 aaPredicted RBP24.79■■□□□ 1.56
SKOR2-201ENST00000400404 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
SKOR2-201ENST00000400404 PDS5BQ9NTI5 1447 aa24.7■■□□□ 1.55
SKOR2-201ENST00000400404 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
SKOR2-201ENST00000400404 TOP2AP11388 1531 aaKnown RBP24.63■■□□□ 1.53
SKOR2-201ENST00000400404 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
SKOR2-201ENST00000400404 KIF21AQ7Z4S6 1674 aa24.57■■□□□ 1.52
SKOR2-201ENST00000400404 CFTRP13569 1480 aa24.45■■□□□ 1.5
SKOR2-201ENST00000400404 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
SKOR2-201ENST00000400404 FANCD2Q9BXW9 1451 aa24.38■■□□□ 1.49
SKOR2-201ENST00000400404 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
SKOR2-201ENST00000400404 WDR62O43379 1518 aa24.35■■□□□ 1.49
SKOR2-201ENST00000400404 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
SKOR2-201ENST00000400404 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
SKOR2-201ENST00000400404 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
SKOR2-201ENST00000400404 URB2Q14146 1524 aaKnown RBP24.15■■□□□ 1.46
SKOR2-201ENST00000400404 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
SKOR2-201ENST00000400404 TOPBP1Q92547 1522 aa23.94■■□□□ 1.42
SKOR2-201ENST00000400404 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
SKOR2-201ENST00000400404 IFT140Q96RY7 1462 aa23.89■■□□□ 1.42
SKOR2-201ENST00000400404 DNMBPQ6XZF7 1577 aa23.89■■□□□ 1.41
SKOR2-201ENST00000400404 TRIM41Q8WV44 630 aa23.88■■□□□ 1.41
SKOR2-201ENST00000400404 ZNF608Q9ULD9 1512 aaPredicted RBP23.84■■□□□ 1.41
SKOR2-201ENST00000400404 POLA1P09884 1462 aaPredicted RBP23.73■■□□□ 1.39
SKOR2-201ENST00000400404 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
SKOR2-201ENST00000400404 EIF4G3O43432 1585 aaKnown RBP23.69■■□□□ 1.38
SKOR2-201ENST00000400404 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.38
SKOR2-201ENST00000400404 CUX1P39880 1505 aa23.65■■□□□ 1.38
SKOR2-201ENST00000400404 SOGA1O94964 1423 aa23.63■■□□□ 1.37
SKOR2-201ENST00000400404 FGD5Q6ZNL6 1462 aa23.62■■□□□ 1.37
SKOR2-201ENST00000400404 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
SKOR2-201ENST00000400404 TDRD9Q8NDG6 1382 aaKnown RBP23.58■■□□□ 1.37
SKOR2-201ENST00000400404 FBLN2P98095 1184 aa23.58■■□□□ 1.37
SKOR2-201ENST00000400404 WDR97A6NE52 1622 aa23.51■■□□□ 1.35
SKOR2-201ENST00000400404 RIMBP3CA6NJZ7 1639 aa23.45■■□□□ 1.34
SKOR2-201ENST00000400404 RIMBP3BA6NNM3 1639 aa23.45■■□□□ 1.34
SKOR2-201ENST00000400404 RIMBP3Q9UFD9 1639 aa23.45■■□□□ 1.34
SKOR2-201ENST00000400404 ARHGEF11O15085 1522 aa23.43■■□□□ 1.34
SKOR2-201ENST00000400404 CHD1O14646 1710 aa23.42■■□□□ 1.34
SKOR2-201ENST00000400404 CHMP7Q8WUX9 453 aaPredicted RBP23.41■■□□□ 1.34
SKOR2-201ENST00000400404 WRNQ14191 1432 aaPredicted RBP eCLIP23.41■■□□□ 1.34
SKOR2-201ENST00000400404 SNAPC4Q5SXM2 1469 aa23.4■■□□□ 1.34
SKOR2-201ENST00000400404 CYB5RLQ6IPT4 315 aa23.39■■□□□ 1.33
SKOR2-201ENST00000400404 BIVM-ERCC5R4GMW8 1640 aa23.38■■□□□ 1.33
SKOR2-201ENST00000400404 ABCA10Q8WWZ4 1543 aa23.38■■□□□ 1.33
SKOR2-201ENST00000400404 TOP2BQ02880 1626 aa23.37■■□□□ 1.33
SKOR2-201ENST00000400404 GRIN2BQ13224 1484 aa23.37■■□□□ 1.33
SKOR2-201ENST00000400404 SYNJ1O43426 1573 aa23.35■■□□□ 1.33
SKOR2-201ENST00000400404 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
SKOR2-201ENST00000400404 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.32
SKOR2-201ENST00000400404 GAPVD1Q14C86 1478 aa23.32■■□□□ 1.32
SKOR2-201ENST00000400404 PBRM1Q86U86 1689 aa23.29■■□□□ 1.32
SKOR2-201ENST00000400404 SYNJ2O15056 1496 aa23.26■■□□□ 1.31
SKOR2-201ENST00000400404 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
SKOR2-201ENST00000400404 CLASP1Q7Z460 1538 aa23.21■■□□□ 1.31
SKOR2-201ENST00000400404 ADAMTS12P58397 1594 aa23.13■■□□□ 1.29
SKOR2-201ENST00000400404 TRHP20396 242 aaPredicted RBP23.11■■□□□ 1.29
SKOR2-201ENST00000400404 ERICH3Q5RHP9 1530 aa23.09■■□□□ 1.29
SKOR2-201ENST00000400404 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
SKOR2-201ENST00000400404 FHAD1B1AJZ9 1412 aa23.05■■□□□ 1.28
SKOR2-201ENST00000400404 NUP160Q12769 1436 aa23■■□□□ 1.27
SKOR2-201ENST00000400404 CEP170Q5SW79 1584 aa22.98■■□□□ 1.27
SKOR2-201ENST00000400404 KIF27Q86VH2 1401 aa22.94■■□□□ 1.26
SKOR2-201ENST00000400404 SHROOM2Q13796 1616 aa22.86■■□□□ 1.25
SKOR2-201ENST00000400404 ERCC6L2Q5T890 1561 aa22.86■■□□□ 1.25
SKOR2-201ENST00000400404 IGF1RP08069 1367 aa22.85■■□□□ 1.25
SKOR2-201ENST00000400404 JPH4Q96JJ6 628 aa22.84■■□□□ 1.25
SKOR2-201ENST00000400404 CUL7Q14999 1698 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms