Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.19□□□□□ -0.3
CACNA1BQ00975 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.19□□□□□ -0.3
CACNA1BQ00975 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CACNA1BQ00975 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AC022080.1-201ENST00000366255 781 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 MGST3-204ENST00000367888 778 ntTSL 3 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 PBDC1-202ENST00000373358 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 MIR602-201ENST00000384960 98 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 RN7SL375P-201ENST00000492442 298 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 EEF1GP8-201ENST00000506566 1154 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 RNA5SP288-201ENST00000516075 93 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AL136982.5-201ENST00000605222 294 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AC019109.1-201ENST00000401725 1874 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 RNF141-202ENST00000528665 1374 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 LDHAL6CP-201ENST00000502352 1142 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 PCDHB19P-201ENST00000570871 2371 ntBASIC13.18□□□□□ -0.3
CACNA1BQ00975 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CACNA1BQ00975 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.18□□□□□ -0.3
CACNA1BQ00975 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CACNA1BQ00975 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CACNA1BQ00975 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CACNA1BQ00975 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CACNA1BQ00975 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
CACNA1BQ00975 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CACNA1BQ00975 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CACNA1BQ00975 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CACNA1BQ00975 AC017081.1-201ENST00000420063 823 ntBASIC13.17□□□□□ -0.3
CACNA1BQ00975 PPP1R2P4-201ENST00000424051 595 ntBASIC13.17□□□□□ -0.3
CACNA1BQ00975 SRP9P1-201ENST00000445874 261 ntBASIC13.17□□□□□ -0.3
CACNA1BQ00975 AL136084.1-201ENST00000449172 318 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms