RNA–Protein interactions for RNA: ENST00000389938.6

SH2D6-202, Transcript of SH2 domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D6, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D6-202ENST00000389938 NISCHQ9Y2I1 1504 aa35.37■■■■□ 3.25
SH2D6-202ENST00000389938 CCDC180Q9P1Z9 1646 aa30.89■■■□□ 2.54
SH2D6-202ENST00000389938 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
SH2D6-202ENST00000389938 ABCC9O60706 1549 aa29.32■■■□□ 2.28
SH2D6-202ENST00000389938 DCAF8L2P0C7V8 631 aa29.26■■■□□ 2.28
SH2D6-202ENST00000389938 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
SH2D6-202ENST00000389938 MYO15BQ96JP2 1530 aa28.97■■■□□ 2.23
SH2D6-202ENST00000389938 NACADO15069 1562 aa28.82■■■□□ 2.2
SH2D6-202ENST00000389938 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
SH2D6-202ENST00000389938 RB1CC1Q8TDY2 1594 aa28.6■■■□□ 2.17
SH2D6-202ENST00000389938 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
SH2D6-202ENST00000389938 UNC13AQ9UPW8 1703 aa27.95■■■□□ 2.06
SH2D6-202ENST00000389938 BICRAQ9NZM4 1560 aa27.7■■■□□ 2.03
SH2D6-202ENST00000389938 SUPT5HO00267 1087 aaKnown RBP27.64■■■□□ 2.01
SH2D6-202ENST00000389938 PABPN1Q86U42 306 aaKnown RBP eCLIP27.63■■■□□ 2.01
SH2D6-202ENST00000389938 CECR2Q9BXF3 1484 aa27.48■■□□□ 1.99
SH2D6-202ENST00000389938 RSF1Q96T23 1441 aaPredicted RBP27.4■■□□□ 1.98
SH2D6-202ENST00000389938 BAZ1AQ9NRL2 1556 aaPredicted RBP27.34■■□□□ 1.97
SH2D6-202ENST00000389938 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
SH2D6-202ENST00000389938 SMARCA4P51532 1647 aa27.22■■□□□ 1.95
SH2D6-202ENST00000389938 WIZO95785 1651 aa27.07■■□□□ 1.92
SH2D6-202ENST00000389938 EIF4G1Q04637 1599 aaKnown RBP26.9■■□□□ 1.9
SH2D6-202ENST00000389938 PEG3Q9GZU2 1588 aa26.89■■□□□ 1.9
SH2D6-202ENST00000389938 TOP2AP11388 1531 aaKnown RBP26.83■■□□□ 1.88
SH2D6-202ENST00000389938 ATAD2BQ9ULI0 1458 aa26.81■■□□□ 1.88
SH2D6-202ENST00000389938 SMARCA2P51531 1590 aa26.8■■□□□ 1.88
SH2D6-202ENST00000389938 BAZ1BQ9UIG0 1483 aaKnown RBP26.66■■□□□ 1.86
SH2D6-202ENST00000389938 NCAPD3P42695 1498 aa26.6■■□□□ 1.85
SH2D6-202ENST00000389938 HMGXB3Q12766 1538 aa26.56■■□□□ 1.84
SH2D6-202ENST00000389938 CCDC88BA6NC98 1476 aa26.53■■□□□ 1.84
SH2D6-202ENST00000389938 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
SH2D6-202ENST00000389938 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
SH2D6-202ENST00000389938 TRIM41Q8WV44 630 aa26.01■■□□□ 1.75
SH2D6-202ENST00000389938 CFTRP13569 1480 aa25.98■■□□□ 1.75
SH2D6-202ENST00000389938 DNAJC5BQ9UF47 199 aa25.93■■□□□ 1.74
SH2D6-202ENST00000389938 ABCC8Q09428 1581 aa25.93■■□□□ 1.74
SH2D6-202ENST00000389938 CADPSQ9ULU8 1353 aa25.92■■□□□ 1.74
SH2D6-202ENST00000389938 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.72
SH2D6-202ENST00000389938 PRDM2Q13029 1718 aa25.8■■□□□ 1.72
SH2D6-202ENST00000389938 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
SH2D6-202ENST00000389938 NESP48681 1621 aa25.7■■□□□ 1.7
SH2D6-202ENST00000389938 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
SH2D6-202ENST00000389938 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
SH2D6-202ENST00000389938 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
SH2D6-202ENST00000389938 BIVM-ERCC5R4GMW8 1640 aa25.56■■□□□ 1.68
SH2D6-202ENST00000389938 CUX1P39880 1505 aa25.56■■□□□ 1.68
SH2D6-202ENST00000389938 HRCP23327 699 aa25.55■■□□□ 1.68
SH2D6-202ENST00000389938 PDS5BQ9NTI5 1447 aa25.54■■□□□ 1.68
SH2D6-202ENST00000389938 FAM9AQ8IZU1 332 aaPredicted RBP25.51■■□□□ 1.67
SH2D6-202ENST00000389938 CEP164Q9UPV0 1460 aa25.49■■□□□ 1.67
SH2D6-202ENST00000389938 LOC105371045A0A1W2PR82 267 aa25.44■■□□□ 1.66
SH2D6-202ENST00000389938 SOGA1O94964 1423 aa25.43■■□□□ 1.66
SH2D6-202ENST00000389938 EEA1Q15075 1411 aa25.39■■□□□ 1.66
SH2D6-202ENST00000389938 DNMBPQ6XZF7 1577 aa25.37■■□□□ 1.65
SH2D6-202ENST00000389938 KIF21AQ7Z4S6 1674 aa25.37■■□□□ 1.65
SH2D6-202ENST00000389938 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
SH2D6-202ENST00000389938 TOPBP1Q92547 1522 aa25.34■■□□□ 1.65
SH2D6-202ENST00000389938 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
SH2D6-202ENST00000389938 FGD5Q6ZNL6 1462 aa25.31■■□□□ 1.64
SH2D6-202ENST00000389938 URB2Q14146 1524 aaKnown RBP25.3■■□□□ 1.64
SH2D6-202ENST00000389938 CSRNP3Q8WYN3 585 aa25.25■■□□□ 1.63
SH2D6-202ENST00000389938 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
SH2D6-202ENST00000389938 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
SH2D6-202ENST00000389938 ERCC6Q03468 1493 aa25.19■■□□□ 1.62
SH2D6-202ENST00000389938 KIF27Q86VH2 1401 aa25.18■■□□□ 1.62
SH2D6-202ENST00000389938 EHMT2Q96KQ7 1210 aa25.14■■□□□ 1.62
SH2D6-202ENST00000389938 CUX2O14529 1486 aa25.13■■□□□ 1.61
SH2D6-202ENST00000389938 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
SH2D6-202ENST00000389938 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
SH2D6-202ENST00000389938 WDR62O43379 1518 aa25.08■■□□□ 1.6
SH2D6-202ENST00000389938 KIF21BO75037 1637 aa25.04■■□□□ 1.6
SH2D6-202ENST00000389938 GOLGA3Q08378 1498 aa25.03■■□□□ 1.6
SH2D6-202ENST00000389938 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
SH2D6-202ENST00000389938 WDR97A6NE52 1622 aa24.98■■□□□ 1.59
SH2D6-202ENST00000389938 PRXQ9BXM0 1461 aa24.96■■□□□ 1.59
SH2D6-202ENST00000389938 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
SH2D6-202ENST00000389938 IGF1RP08069 1367 aa24.94■■□□□ 1.58
SH2D6-202ENST00000389938 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
SH2D6-202ENST00000389938 RAPGEF2Q9Y4G8 1499 aa24.93■■□□□ 1.58
SH2D6-202ENST00000389938 UBTFP17480 764 aaKnown RBP24.93■■□□□ 1.58
SH2D6-202ENST00000389938 TNIKQ9UKE5 1360 aa24.92■■□□□ 1.58
SH2D6-202ENST00000389938 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
SH2D6-202ENST00000389938 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
SH2D6-202ENST00000389938 TDRD9Q8NDG6 1382 aaKnown RBP24.88■■□□□ 1.57
SH2D6-202ENST00000389938 PPARGC1BQ86YN6 1023 aaKnown RBP24.88■■□□□ 1.57
SH2D6-202ENST00000389938 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
SH2D6-202ENST00000389938 GAPVD1Q14C86 1478 aa24.85■■□□□ 1.57
SH2D6-202ENST00000389938 CARMIL1Q5VZK9 1371 aa24.83■■□□□ 1.57
SH2D6-202ENST00000389938 CEP162Q5TB80 1403 aa24.78■■□□□ 1.56
SH2D6-202ENST00000389938 CUL7Q14999 1698 aa24.77■■□□□ 1.56
SH2D6-202ENST00000389938 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.55
SH2D6-202ENST00000389938 ZNF608Q9ULD9 1512 aaPredicted RBP24.73■■□□□ 1.55
SH2D6-202ENST00000389938 PBRM1Q86U86 1689 aa24.68■■□□□ 1.54
SH2D6-202ENST00000389938 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
SH2D6-202ENST00000389938 EIF4G3O43432 1585 aaKnown RBP24.65■■□□□ 1.54
SH2D6-202ENST00000389938 CLIP1P30622 1438 aa24.62■■□□□ 1.53
SH2D6-202ENST00000389938 FHAD1B1AJZ9 1412 aa24.59■■□□□ 1.53
SH2D6-202ENST00000389938 ADAMTS12P58397 1594 aa24.57■■□□□ 1.52
SH2D6-202ENST00000389938 ZEB1P37275 1124 aaPredicted RBP24.54■■□□□ 1.52
SH2D6-202ENST00000389938 RANGAP1P46060 587 aaPredicted RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms