RNA–Protein interactions for RNA: ENST00000510545.5

CLDND1-222, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-222ENST00000510545 NISCHQ9Y2I1 1504 aa35.94■■■■□ 3.34
CLDND1-222ENST00000510545 CCDC180Q9P1Z9 1646 aa31.06■■■□□ 2.56
CLDND1-222ENST00000510545 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
CLDND1-222ENST00000510545 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
CLDND1-222ENST00000510545 SHROOM4Q9ULL8 1493 aa29.72■■■□□ 2.35
CLDND1-222ENST00000510545 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
CLDND1-222ENST00000510545 ABCC9O60706 1549 aa29.3■■■□□ 2.28
CLDND1-222ENST00000510545 MYO15BQ96JP2 1530 aa29.12■■■□□ 2.25
CLDND1-222ENST00000510545 NACADO15069 1562 aa28.89■■■□□ 2.22
CLDND1-222ENST00000510545 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
CLDND1-222ENST00000510545 SUPT5HO00267 1087 aaKnown RBP28.72■■■□□ 2.19
CLDND1-222ENST00000510545 RB1CC1Q8TDY2 1594 aa28.57■■■□□ 2.16
CLDND1-222ENST00000510545 UNC13AQ9UPW8 1703 aa28.1■■■□□ 2.09
CLDND1-222ENST00000510545 RSF1Q96T23 1441 aaPredicted RBP28.06■■■□□ 2.08
CLDND1-222ENST00000510545 CECR2Q9BXF3 1484 aa28.01■■■□□ 2.07
CLDND1-222ENST00000510545 MROH2BQ7Z745 1585 aa27.84■■■□□ 2.05
CLDND1-222ENST00000510545 BICRAQ9NZM4 1560 aa27.83■■■□□ 2.05
CLDND1-222ENST00000510545 PABPN1Q86U42 306 aaKnown RBP eCLIP27.77■■■□□ 2.04
CLDND1-222ENST00000510545 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
CLDND1-222ENST00000510545 WIZO95785 1651 aa27.63■■■□□ 2.01
CLDND1-222ENST00000510545 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
CLDND1-222ENST00000510545 SMARCA4P51532 1647 aa27.55■■■□□ 2
CLDND1-222ENST00000510545 TOP2AP11388 1531 aaKnown RBP27.26■■□□□ 1.96
CLDND1-222ENST00000510545 PEG3Q9GZU2 1588 aa27.15■■□□□ 1.94
CLDND1-222ENST00000510545 CCDC88BA6NC98 1476 aa27.07■■□□□ 1.92
CLDND1-222ENST00000510545 SMARCA2P51531 1590 aa27.06■■□□□ 1.92
CLDND1-222ENST00000510545 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
CLDND1-222ENST00000510545 EIF4G1Q04637 1599 aaKnown RBP26.97■■□□□ 1.91
CLDND1-222ENST00000510545 TRIM41Q8WV44 630 aa26.9■■□□□ 1.9
CLDND1-222ENST00000510545 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.89
CLDND1-222ENST00000510545 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
CLDND1-222ENST00000510545 LOC105371045A0A1W2PR82 267 aa26.67■■□□□ 1.86
CLDND1-222ENST00000510545 HMGXB3Q12766 1538 aa26.67■■□□□ 1.86
CLDND1-222ENST00000510545 ABCC8Q09428 1581 aa26.65■■□□□ 1.86
CLDND1-222ENST00000510545 FAM9AQ8IZU1 332 aaPredicted RBP26.54■■□□□ 1.84
CLDND1-222ENST00000510545 CC2D2AQ9P2K1 1620 aa26.47■■□□□ 1.83
CLDND1-222ENST00000510545 WRNQ14191 1432 aaPredicted RBP eCLIP26.36■■□□□ 1.81
CLDND1-222ENST00000510545 SYNJ1O43426 1573 aa26.28■■□□□ 1.8
CLDND1-222ENST00000510545 CFTRP13569 1480 aa26.23■■□□□ 1.79
CLDND1-222ENST00000510545 EHMT2Q96KQ7 1210 aa26.23■■□□□ 1.79
CLDND1-222ENST00000510545 SOGA1O94964 1423 aa26.22■■□□□ 1.79
CLDND1-222ENST00000510545 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
CLDND1-222ENST00000510545 CADPSQ9ULU8 1353 aa26.09■■□□□ 1.77
CLDND1-222ENST00000510545 TOP2BQ02880 1626 aa26.08■■□□□ 1.76
CLDND1-222ENST00000510545 EEA1Q15075 1411 aa26.04■■□□□ 1.76
CLDND1-222ENST00000510545 BIVM-ERCC5R4GMW8 1640 aa26.02■■□□□ 1.76
CLDND1-222ENST00000510545 PRDM2Q13029 1718 aa26.01■■□□□ 1.76
CLDND1-222ENST00000510545 CSRNP3Q8WYN3 585 aa26■■□□□ 1.75
CLDND1-222ENST00000510545 CUX1P39880 1505 aa26■■□□□ 1.75
CLDND1-222ENST00000510545 DNAJC5BQ9UF47 199 aa25.94■■□□□ 1.74
CLDND1-222ENST00000510545 NESP48681 1621 aa25.86■■□□□ 1.73
CLDND1-222ENST00000510545 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
CLDND1-222ENST00000510545 GOLGA3Q08378 1498 aa25.77■■□□□ 1.72
CLDND1-222ENST00000510545 TNIKQ9UKE5 1360 aa25.77■■□□□ 1.72
CLDND1-222ENST00000510545 KIF21BO75037 1637 aa25.74■■□□□ 1.71
CLDND1-222ENST00000510545 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
CLDND1-222ENST00000510545 CEP164Q9UPV0 1460 aa25.73■■□□□ 1.71
CLDND1-222ENST00000510545 UBTFP17480 764 aaKnown RBP25.72■■□□□ 1.71
CLDND1-222ENST00000510545 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
CLDND1-222ENST00000510545 CEP162Q5TB80 1403 aa25.69■■□□□ 1.7
CLDND1-222ENST00000510545 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
CLDND1-222ENST00000510545 RAPGEF2Q9Y4G8 1499 aa25.65■■□□□ 1.7
CLDND1-222ENST00000510545 KIF27Q86VH2 1401 aa25.63■■□□□ 1.69
CLDND1-222ENST00000510545 DNMBPQ6XZF7 1577 aa25.58■■□□□ 1.69
CLDND1-222ENST00000510545 PRXQ9BXM0 1461 aa25.57■■□□□ 1.68
CLDND1-222ENST00000510545 TOPBP1Q92547 1522 aa25.56■■□□□ 1.68
CLDND1-222ENST00000510545 TRIM26Q12899 539 aaPredicted RBP25.55■■□□□ 1.68
CLDND1-222ENST00000510545 CUX2O14529 1486 aa25.55■■□□□ 1.68
CLDND1-222ENST00000510545 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
CLDND1-222ENST00000510545 URB2Q14146 1524 aaKnown RBP25.5■■□□□ 1.67
CLDND1-222ENST00000510545 ERICH3Q5RHP9 1530 aa25.49■■□□□ 1.67
CLDND1-222ENST00000510545 POLA1P09884 1462 aaPredicted RBP25.48■■□□□ 1.67
CLDND1-222ENST00000510545 KIF21AQ7Z4S6 1674 aa25.46■■□□□ 1.67
CLDND1-222ENST00000510545 RAD54L2Q9Y4B4 1467 aa25.46■■□□□ 1.67
CLDND1-222ENST00000510545 IGF1RP08069 1367 aa25.44■■□□□ 1.66
CLDND1-222ENST00000510545 PPARGC1BQ86YN6 1023 aaKnown RBP25.44■■□□□ 1.66
CLDND1-222ENST00000510545 CLIP1P30622 1438 aa25.41■■□□□ 1.66
CLDND1-222ENST00000510545 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
CLDND1-222ENST00000510545 RANGAP1P46060 587 aaPredicted RBP25.33■■□□□ 1.64
CLDND1-222ENST00000510545 CARMIL1Q5VZK9 1371 aa25.3■■□□□ 1.64
CLDND1-222ENST00000510545 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
CLDND1-222ENST00000510545 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
CLDND1-222ENST00000510545 MRC2Q9UBG0 1479 aa25.2■■□□□ 1.62
CLDND1-222ENST00000510545 HRCP23327 699 aa25.19■■□□□ 1.62
CLDND1-222ENST00000510545 TDRD9Q8NDG6 1382 aaKnown RBP25.19■■□□□ 1.62
CLDND1-222ENST00000510545 TTBK1Q5TCY1 1321 aaPredicted RBP25.16■■□□□ 1.62
CLDND1-222ENST00000510545 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
CLDND1-222ENST00000510545 ARAP1Q96P48 1450 aa25.15■■□□□ 1.62
CLDND1-222ENST00000510545 TARBP1Q13395 1621 aaKnown RBP25.15■■□□□ 1.62
CLDND1-222ENST00000510545 GAPVD1Q14C86 1478 aa25.11■■□□□ 1.61
CLDND1-222ENST00000510545 CUL7Q14999 1698 aa25.09■■□□□ 1.61
CLDND1-222ENST00000510545 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
CLDND1-222ENST00000510545 WDR62O43379 1518 aa25.06■■□□□ 1.6
CLDND1-222ENST00000510545 ERCC6Q03468 1493 aa25.01■■□□□ 1.59
CLDND1-222ENST00000510545 AQRO60306 1485 aaKnown RBP eCLIP24.97■■□□□ 1.591e-6■■■■□ 26.1
CLDND1-222ENST00000510545 APLP2Q06481 763 aa24.94■■□□□ 1.58
CLDND1-222ENST00000510545 THOC2Q8NI27 1593 aaKnown RBP24.93■■□□□ 1.58
CLDND1-222ENST00000510545 IFT140Q96RY7 1462 aa24.93■■□□□ 1.58
CLDND1-222ENST00000510545 ZNF608Q9ULD9 1512 aaPredicted RBP24.91■■□□□ 1.58
CLDND1-222ENST00000510545 PBRM1Q86U86 1689 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms