RNA–Protein interactions for RNA: ENST00000460115.5

NBR2-202, neighbor of BRCA1 lncRNA 2, humanhuman

TSL 2 BASIC

Gene NBR2, Length 1,344 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR2-202ENST00000460115 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.39
NBR2-202ENST00000460115 CCDC180Q9P1Z9 1646 aa26.7■■□□□ 1.87
NBR2-202ENST00000460115 ABCC9O60706 1549 aa26.52■■□□□ 1.84
NBR2-202ENST00000460115 DNAJC5BQ9UF47 199 aa25.72■■□□□ 1.71
NBR2-202ENST00000460115 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
NBR2-202ENST00000460115 NACADO15069 1562 aa25.08■■□□□ 1.61
NBR2-202ENST00000460115 DCAF8L2P0C7V8 631 aa25.08■■□□□ 1.6
NBR2-202ENST00000460115 ZCCHC6Q5VYS8 1495 aaKnown RBP24.98■■□□□ 1.59
NBR2-202ENST00000460115 MYO15BQ96JP2 1530 aa24.88■■□□□ 1.57
NBR2-202ENST00000460115 DCAF1Q9Y4B6 1507 aa24.76■■□□□ 1.55
NBR2-202ENST00000460115 UNC13AQ9UPW8 1703 aa24.76■■□□□ 1.55
NBR2-202ENST00000460115 PABPN1Q86U42 306 aaKnown RBP eCLIP24.53■■□□□ 1.52
NBR2-202ENST00000460115 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
NBR2-202ENST00000460115 DNAJC5Q9H3Z4 198 aa24.5■■□□□ 1.51
NBR2-202ENST00000460115 SCRIBQ14160 1630 aa24.42■■□□□ 1.5
NBR2-202ENST00000460115 CECR2Q9BXF3 1484 aa24.04■■□□□ 1.44
NBR2-202ENST00000460115 SHROOM4Q9ULL8 1493 aa24.04■■□□□ 1.44
NBR2-202ENST00000460115 CC2D2AQ9P2K1 1620 aa23.9■■□□□ 1.42
NBR2-202ENST00000460115 EIF4G1Q04637 1599 aaKnown RBP23.81■■□□□ 1.4
NBR2-202ENST00000460115 CUX2O14529 1486 aa23.36■■□□□ 1.33
NBR2-202ENST00000460115 SMARCA4P51532 1647 aa23.33■■□□□ 1.33
NBR2-202ENST00000460115 BAZ1AQ9NRL2 1556 aaPredicted RBP23.22■■□□□ 1.31
NBR2-202ENST00000460115 ATAD2BQ9ULI0 1458 aa23.19■■□□□ 1.3
NBR2-202ENST00000460115 MROH2BQ7Z745 1585 aa23.18■■□□□ 1.3
NBR2-202ENST00000460115 NCAPD3P42695 1498 aa23.17■■□□□ 1.3
NBR2-202ENST00000460115 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
NBR2-202ENST00000460115 PEG3Q9GZU2 1588 aa23.07■■□□□ 1.28
NBR2-202ENST00000460115 ERCC6Q03468 1493 aa23.07■■□□□ 1.28
NBR2-202ENST00000460115 HMGXB3Q12766 1538 aa23.04■■□□□ 1.28
NBR2-202ENST00000460115 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
NBR2-202ENST00000460115 BAZ1BQ9UIG0 1483 aaKnown RBP22.97■■□□□ 1.27
NBR2-202ENST00000460115 WIZO95785 1651 aa22.96■■□□□ 1.27
NBR2-202ENST00000460115 RSF1Q96T23 1441 aaPredicted RBP22.84■■□□□ 1.25
NBR2-202ENST00000460115 NESP48681 1621 aa22.75■■□□□ 1.23
NBR2-202ENST00000460115 TOP2AP11388 1531 aaKnown RBP22.61■■□□□ 1.21
NBR2-202ENST00000460115 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
NBR2-202ENST00000460115 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
NBR2-202ENST00000460115 CADPSQ9ULU8 1353 aa22.47■■□□□ 1.19
NBR2-202ENST00000460115 THOC2Q8NI27 1593 aaKnown RBP22.46■■□□□ 1.19
NBR2-202ENST00000460115 CCDC88BA6NC98 1476 aa22.38■■□□□ 1.17
NBR2-202ENST00000460115 PDS5BQ9NTI5 1447 aa22.36■■□□□ 1.17
NBR2-202ENST00000460115 CFTRP13569 1480 aa22.34■■□□□ 1.17
NBR2-202ENST00000460115 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
NBR2-202ENST00000460115 PRDM2Q13029 1718 aa22.23■■□□□ 1.15
NBR2-202ENST00000460115 MRC2Q9UBG0 1479 aa22.19■■□□□ 1.14
NBR2-202ENST00000460115 CEP164Q9UPV0 1460 aa22.19■■□□□ 1.14
NBR2-202ENST00000460115 SUPT5HO00267 1087 aaKnown RBP22.19■■□□□ 1.14
NBR2-202ENST00000460115 WDR62O43379 1518 aa22.15■■□□□ 1.14
NBR2-202ENST00000460115 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
NBR2-202ENST00000460115 URB2Q14146 1524 aaKnown RBP22.08■■□□□ 1.13
NBR2-202ENST00000460115 AEBP2Q6ZN18 517 aaPredicted RBP22.02■■□□□ 1.12
NBR2-202ENST00000460115 TOPBP1Q92547 1522 aa21.9■■□□□ 1.1
NBR2-202ENST00000460115 RIMBP3CA6NJZ7 1639 aa21.9■■□□□ 1.1
NBR2-202ENST00000460115 RIMBP3BA6NNM3 1639 aa21.9■■□□□ 1.1
NBR2-202ENST00000460115 RIMBP3Q9UFD9 1639 aa21.9■■□□□ 1.1
NBR2-202ENST00000460115 DNMBPQ6XZF7 1577 aa21.85■■□□□ 1.09
NBR2-202ENST00000460115 TRHP20396 242 aaPredicted RBP21.81■■□□□ 1.08
NBR2-202ENST00000460115 ABCC8Q09428 1581 aa21.77■■□□□ 1.08
NBR2-202ENST00000460115 CUX1P39880 1505 aa21.74■■□□□ 1.07
NBR2-202ENST00000460115 ZNF608Q9ULD9 1512 aaPredicted RBP21.74■■□□□ 1.07
NBR2-202ENST00000460115 ARHGEF11O15085 1522 aa21.73■■□□□ 1.07
NBR2-202ENST00000460115 IFT140Q96RY7 1462 aa21.72■■□□□ 1.07
NBR2-202ENST00000460115 POLA1P09884 1462 aaPredicted RBP21.71■■□□□ 1.07
NBR2-202ENST00000460115 TARBP1Q13395 1621 aaKnown RBP21.71■■□□□ 1.07
NBR2-202ENST00000460115 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
NBR2-202ENST00000460115 FGD5Q6ZNL6 1462 aa21.65■■□□□ 1.06
NBR2-202ENST00000460115 CYB5RLQ6IPT4 315 aa21.64■■□□□ 1.05
NBR2-202ENST00000460115 EIF4G3O43432 1585 aaKnown RBP21.63■■□□□ 1.05
NBR2-202ENST00000460115 AQRO60306 1485 aaKnown RBP eCLIP21.58■■□□□ 1.04
NBR2-202ENST00000460115 SOGA1O94964 1423 aa21.58■■□□□ 1.04
NBR2-202ENST00000460115 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
NBR2-202ENST00000460115 WDR97A6NE52 1622 aa21.53■■□□□ 1.04
NBR2-202ENST00000460115 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.04
NBR2-202ENST00000460115 TDRD9Q8NDG6 1382 aaKnown RBP21.51■■□□□ 1.03
NBR2-202ENST00000460115 TOP2BQ02880 1626 aa21.5■■□□□ 1.03
NBR2-202ENST00000460115 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
NBR2-202ENST00000460115 CHD1O14646 1710 aa21.42■■□□□ 1.02
NBR2-202ENST00000460115 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
NBR2-202ENST00000460115 ABCA10Q8WWZ4 1543 aa21.4■■□□□ 1.02
NBR2-202ENST00000460115 ABCA5Q8WWZ7 1642 aa21.37■■□□□ 1.01
NBR2-202ENST00000460115 PBRM1Q86U86 1689 aa21.37■■□□□ 1.01
NBR2-202ENST00000460115 SNAPC4Q5SXM2 1469 aa21.34■■□□□ 1.01
NBR2-202ENST00000460115 GAPVD1Q14C86 1478 aa21.33■■□□□ 1
NBR2-202ENST00000460115 GRIN2BQ13224 1484 aa21.32■■□□□ 1
NBR2-202ENST00000460115 FBLN2P98095 1184 aa21.27■□□□□ 0.99
NBR2-202ENST00000460115 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
NBR2-202ENST00000460115 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
NBR2-202ENST00000460115 CHMP7Q8WUX9 453 aaPredicted RBP21.16■□□□□ 0.98
NBR2-202ENST00000460115 ADAMTS12P58397 1594 aa21.16■□□□□ 0.98
NBR2-202ENST00000460115 ILDR1Q86SU0 546 aaPredicted RBP21.14■□□□□ 0.97
NBR2-202ENST00000460115 CLASP1Q7Z460 1538 aa21.13■□□□□ 0.97
NBR2-202ENST00000460115 ERICH3Q5RHP9 1530 aa21.12■□□□□ 0.97
NBR2-202ENST00000460115 GRIN2AQ12879 1464 aa21.08■□□□□ 0.96
NBR2-202ENST00000460115 FHAD1B1AJZ9 1412 aa21.06■□□□□ 0.96
NBR2-202ENST00000460115 CEP170Q5SW79 1584 aa21.04■□□□□ 0.96
NBR2-202ENST00000460115 KIF27Q86VH2 1401 aa21.01■□□□□ 0.95
NBR2-202ENST00000460115 IGF1RP08069 1367 aa21■□□□□ 0.95
NBR2-202ENST00000460115 NUP160Q12769 1436 aa20.98■□□□□ 0.95
NBR2-202ENST00000460115 RUSC2Q8N2Y8 1516 aa20.97■□□□□ 0.95
NBR2-202ENST00000460115 CUL7Q14999 1698 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms