RNA–Protein interactions for RNA: ENST00000240100.6

DUSP4-201, Transcript of dual specificity phosphatase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP4, Length 5,537 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-201ENST00000240100 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
DUSP4-201ENST00000240100 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
DUSP4-201ENST00000240100 SUPT5HO00267 1087 aaKnown RBP28.41■■■□□ 2.14
DUSP4-201ENST00000240100 SHROOM4Q9ULL8 1493 aa28.02■■■□□ 2.08
DUSP4-201ENST00000240100 EHMT2Q96KQ7 1210 aa27.05■■□□□ 1.92
DUSP4-201ENST00000240100 PELP1Q8IZL8 1130 aaKnown RBP26.92■■□□□ 1.9
DUSP4-201ENST00000240100 PCGF6Q9BYE7 350 aa26.82■■□□□ 1.88
DUSP4-201ENST00000240100 APLP2Q06481 763 aa26.81■■□□□ 1.88
DUSP4-201ENST00000240100 FAM9AQ8IZU1 332 aaPredicted RBP26.65■■□□□ 1.86
DUSP4-201ENST00000240100 ZEB1P37275 1124 aaPredicted RBP26.64■■□□□ 1.86
DUSP4-201ENST00000240100 TRIM41Q8WV44 630 aa26.46■■□□□ 1.83
DUSP4-201ENST00000240100 CENPBP07199 599 aaPredicted RBP26.3■■□□□ 1.8
DUSP4-201ENST00000240100 TTBK1Q5TCY1 1321 aaPredicted RBP26.25■■□□□ 1.79
DUSP4-201ENST00000240100 CCER1Q8TC90 406 aaPredicted RBP26.2■■□□□ 1.79
DUSP4-201ENST00000240100 TRIM26Q12899 539 aaPredicted RBP25.96■■□□□ 1.75
DUSP4-201ENST00000240100 UBTFP17480 764 aaKnown RBP25.94■■□□□ 1.74
DUSP4-201ENST00000240100 HRCP23327 699 aa25.89■■□□□ 1.73
DUSP4-201ENST00000240100 RANGAP1P46060 587 aaPredicted RBP25.86■■□□□ 1.73
DUSP4-201ENST00000240100 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
DUSP4-201ENST00000240100 ERICH6Q7L0X2 663 aa25.63■■□□□ 1.69
DUSP4-201ENST00000240100 MYT1Q01538 1121 aa25.61■■□□□ 1.69
DUSP4-201ENST00000240100 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
DUSP4-201ENST00000240100 PPARGC1BQ86YN6 1023 aaKnown RBP25.51■■□□□ 1.67
DUSP4-201ENST00000240100 NEFLP07196 543 aa25.5■■□□□ 1.67
DUSP4-201ENST00000240100 LOC105371045A0A1W2PR82 267 aa25.49■■□□□ 1.67
DUSP4-201ENST00000240100 YTHDC1Q96MU7 727 aaKnown RBP25.49■■□□□ 1.67
DUSP4-201ENST00000240100 HNRNPUL2Q1KMD3 747 aaKnown RBP25.04■■□□□ 1.6
DUSP4-201ENST00000240100 ABCC9O60706 1549 aa24.99■■□□□ 1.59
DUSP4-201ENST00000240100 ITGAEP38570 1179 aa24.97■■□□□ 1.59
DUSP4-201ENST00000240100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.93■■□□□ 1.58
DUSP4-201ENST00000240100 DIEXFQ68CQ4 756 aaKnown RBP24.92■■□□□ 1.58
DUSP4-201ENST00000240100 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
DUSP4-201ENST00000240100 POLR3GLQ9BT43 218 aa24.58■■□□□ 1.52
DUSP4-201ENST00000240100 DCAF1Q9Y4B6 1507 aa24.55■■□□□ 1.52
DUSP4-201ENST00000240100 DAXXQ9UER7 740 aaPredicted RBP24.53■■□□□ 1.52
DUSP4-201ENST00000240100 PABPN1Q86U42 306 aaKnown RBP eCLIP24.51■■□□□ 1.51
DUSP4-201ENST00000240100 FAM50AQ14320 339 aaKnown RBP24.5■■□□□ 1.51
DUSP4-201ENST00000240100 CCDC180Q9P1Z9 1646 aa24.46■■□□□ 1.51
DUSP4-201ENST00000240100 ZNF316A6NFI3 1004 aaPredicted RBP24.45■■□□□ 1.5
DUSP4-201ENST00000240100 GTF3C3Q9Y5Q9 886 aa24.42■■□□□ 1.5
DUSP4-201ENST00000240100 MYT1LQ9UL68 1186 aa24.35■■□□□ 1.49
DUSP4-201ENST00000240100 CSRNP3Q8WYN3 585 aa24.34■■□□□ 1.49
DUSP4-201ENST00000240100 SCRIBQ14160 1630 aa24.31■■□□□ 1.48
DUSP4-201ENST00000240100 NEUROD1Q13562 356 aa24.3■■□□□ 1.48
DUSP4-201ENST00000240100 TRIM52Q96A61 297 aa24.28■■□□□ 1.48
DUSP4-201ENST00000240100 ACIN1Q9UKV3 1341 aaKnown RBP24.27■■□□□ 1.48
DUSP4-201ENST00000240100 ANP32CO43423 234 aa24.26■■□□□ 1.47
DUSP4-201ENST00000240100 CNGB1Q14028 1251 aaPredicted RBP24.24■■□□□ 1.47
DUSP4-201ENST00000240100 RTL5Q5HYW3 569 aaPredicted RBP24.17■■□□□ 1.46
DUSP4-201ENST00000240100 CLSPNQ9HAW4 1339 aa24.06■■□□□ 1.44
DUSP4-201ENST00000240100 BCANQ96GW7 911 aa24.06■■□□□ 1.44
DUSP4-201ENST00000240100 CDK11AQ9UQ88 783 aaPredicted RBP24.04■■□□□ 1.44
DUSP4-201ENST00000240100 SLC4A1APQ9BWU0 796 aaKnown RBP23.95■■□□□ 1.42
DUSP4-201ENST00000240100 MYO15BQ96JP2 1530 aa23.91■■□□□ 1.42
DUSP4-201ENST00000240100 ZNF326Q5BKZ1 582 aaKnown RBP23.87■■□□□ 1.41
DUSP4-201ENST00000240100 P3H3Q8IVL6 736 aa23.83■■□□□ 1.41
DUSP4-201ENST00000240100 TONSLQ96HA7 1378 aa23.74■■□□□ 1.39
DUSP4-201ENST00000240100 RSF1Q96T23 1441 aaPredicted RBP23.74■■□□□ 1.39
DUSP4-201ENST00000240100 EEA1Q15075 1411 aa23.73■■□□□ 1.39
DUSP4-201ENST00000240100 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
DUSP4-201ENST00000240100 CLIP1P30622 1438 aa23.65■■□□□ 1.38
DUSP4-201ENST00000240100 FBLN2P98095 1184 aa23.63■■□□□ 1.37
DUSP4-201ENST00000240100 GOLGA3Q08378 1498 aa23.63■■□□□ 1.37
DUSP4-201ENST00000240100 ANP32AP39687 249 aaKnown RBP23.61■■□□□ 1.37
DUSP4-201ENST00000240100 FKBP8Q14318 412 aa23.61■■□□□ 1.37
DUSP4-201ENST00000240100 CEP162Q5TB80 1403 aa23.58■■□□□ 1.37
DUSP4-201ENST00000240100 NACADO15069 1562 aa23.55■■□□□ 1.36
DUSP4-201ENST00000240100 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
DUSP4-201ENST00000240100 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
DUSP4-201ENST00000240100 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
DUSP4-201ENST00000240100 CANXP27824 592 aaKnown RBP23.53■■□□□ 1.36
DUSP4-201ENST00000240100 ZNF777Q9ULD5 760 aaPredicted RBP23.51■■□□□ 1.35
DUSP4-201ENST00000240100 HNRNPUQ00839 825 aaKnown RBP eCLIP23.49■■□□□ 1.35
DUSP4-201ENST00000240100 ZBTB47Q9UFB7 747 aaPredicted RBP23.48■■□□□ 1.35
DUSP4-201ENST00000240100 TNIKQ9UKE5 1360 aa23.46■■□□□ 1.35
DUSP4-201ENST00000240100 MIER1Q8N108 512 aa23.45■■□□□ 1.34
DUSP4-201ENST00000240100 WRNQ14191 1432 aaPredicted RBP eCLIP23.4■■□□□ 1.34
DUSP4-201ENST00000240100 CEP164Q9UPV0 1460 aa23.38■■□□□ 1.33
DUSP4-201ENST00000240100 NEFMP07197 916 aa23.38■■□□□ 1.33
DUSP4-201ENST00000240100 MTUS2Q5JR59 1369 aa23.37■■□□□ 1.33
DUSP4-201ENST00000240100 FAM9BQ8IZU0 186 aa23.35■■□□□ 1.33
DUSP4-201ENST00000240100 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
DUSP4-201ENST00000240100 NPM2Q86SE8 214 aaKnown RBP23.29■■□□□ 1.32
DUSP4-201ENST00000240100 CHIC2Q9UKJ5 165 aa23.27■■□□□ 1.32
DUSP4-201ENST00000240100 BAZ1BQ9UIG0 1483 aaKnown RBP23.25■■□□□ 1.31
DUSP4-201ENST00000240100 TMC1Q8TDI8 760 aa23.22■■□□□ 1.31
DUSP4-201ENST00000240100 MRS2Q9HD23 443 aa23.21■■□□□ 1.31
DUSP4-201ENST00000240100 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
DUSP4-201ENST00000240100 CCDC136Q96JN2 1154 aa23.19■■□□□ 1.3
DUSP4-201ENST00000240100 EIF4G2P78344 907 aaKnown RBP eCLIP23.18■■□□□ 1.3
DUSP4-201ENST00000240100 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.14■■□□□ 1.29
DUSP4-201ENST00000240100 UPF2Q9HAU5 1272 aaKnown RBP23.11■■□□□ 1.29
DUSP4-201ENST00000240100 TSPY4P0CV99 314 aa23.11■■□□□ 1.29
DUSP4-201ENST00000240100 TSPY10P0CW01 314 aa23.11■■□□□ 1.29
DUSP4-201ENST00000240100 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
DUSP4-201ENST00000240100 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
DUSP4-201ENST00000240100 HIRIP3Q9BW71 556 aaPredicted RBP23.04■■□□□ 1.28
DUSP4-201ENST00000240100 RRP7BPQ9NSQ0 103 aa23.03■■□□□ 1.28
DUSP4-201ENST00000240100 SALL2Q9Y467 1007 aaPredicted RBP23.01■■□□□ 1.27
DUSP4-201ENST00000240100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms