RNA–Protein interactions for RNA: ENST00000373358.7

PBDC1-202, Transcript of polysaccharide biosynthesis domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PBDC1, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBDC1-202ENST00000373358 NISCHQ9Y2I1 1504 aa28.66■■■□□ 2.18
PBDC1-202ENST00000373358 ABCC9O60706 1549 aa26.79■■□□□ 1.88
PBDC1-202ENST00000373358 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
PBDC1-202ENST00000373358 DNAJC5BQ9UF47 199 aa25.93■■□□□ 1.74
PBDC1-202ENST00000373358 RB1CC1Q8TDY2 1594 aa25.11■■□□□ 1.61
PBDC1-202ENST00000373358 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
PBDC1-202ENST00000373358 NACADO15069 1562 aa24.78■■□□□ 1.56
PBDC1-202ENST00000373358 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
PBDC1-202ENST00000373358 BICRAQ9NZM4 1560 aa24.5■■□□□ 1.51
PBDC1-202ENST00000373358 DCAF8L2P0C7V8 631 aa24.47■■□□□ 1.51
PBDC1-202ENST00000373358 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
PBDC1-202ENST00000373358 MYO15BQ96JP2 1530 aa24.21■■□□□ 1.47
PBDC1-202ENST00000373358 CECR2Q9BXF3 1484 aa24.2■■□□□ 1.47
PBDC1-202ENST00000373358 CC2D2AQ9P2K1 1620 aa24.15■■□□□ 1.46
PBDC1-202ENST00000373358 SHROOM4Q9ULL8 1493 aa24.01■■□□□ 1.43
PBDC1-202ENST00000373358 EIF4G1Q04637 1599 aaKnown RBP23.91■■□□□ 1.42
PBDC1-202ENST00000373358 SCRIBQ14160 1630 aa23.64■■□□□ 1.38
PBDC1-202ENST00000373358 DCAF1Q9Y4B6 1507 aa23.62■■□□□ 1.37
PBDC1-202ENST00000373358 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
PBDC1-202ENST00000373358 CUX2O14529 1486 aa23.38■■□□□ 1.33
PBDC1-202ENST00000373358 ERCC6Q03468 1493 aa23.11■■□□□ 1.29
PBDC1-202ENST00000373358 NCAPD3P42695 1498 aa22.94■■□□□ 1.26
PBDC1-202ENST00000373358 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
PBDC1-202ENST00000373358 NESP48681 1621 aa22.82■■□□□ 1.24
PBDC1-202ENST00000373358 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
PBDC1-202ENST00000373358 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
PBDC1-202ENST00000373358 HMGXB3Q12766 1538 aa22.65■■□□□ 1.22
PBDC1-202ENST00000373358 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
PBDC1-202ENST00000373358 SMARCA2P51531 1590 aa22.59■■□□□ 1.21
PBDC1-202ENST00000373358 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
PBDC1-202ENST00000373358 LAMC3Q9Y6N6 1575 aa22.47■■□□□ 1.19
PBDC1-202ENST00000373358 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
PBDC1-202ENST00000373358 BAZ1BQ9UIG0 1483 aaKnown RBP22.43■■□□□ 1.18
PBDC1-202ENST00000373358 PDS5BQ9NTI5 1447 aa22.38■■□□□ 1.17
PBDC1-202ENST00000373358 PEG3Q9GZU2 1588 aa22.31■■□□□ 1.16
PBDC1-202ENST00000373358 BAZ1AQ9NRL2 1556 aaPredicted RBP22.25■■□□□ 1.15
PBDC1-202ENST00000373358 MRC2Q9UBG0 1479 aa22.24■■□□□ 1.15
PBDC1-202ENST00000373358 WDR62O43379 1518 aa22.23■■□□□ 1.15
PBDC1-202ENST00000373358 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
PBDC1-202ENST00000373358 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
PBDC1-202ENST00000373358 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
PBDC1-202ENST00000373358 RIMBP3CA6NJZ7 1639 aa21.98■■□□□ 1.11
PBDC1-202ENST00000373358 RIMBP3BA6NNM3 1639 aa21.98■■□□□ 1.11
PBDC1-202ENST00000373358 RIMBP3Q9UFD9 1639 aa21.98■■□□□ 1.11
PBDC1-202ENST00000373358 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
PBDC1-202ENST00000373358 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
PBDC1-202ENST00000373358 ARHGEF11O15085 1522 aa21.85■■□□□ 1.09
PBDC1-202ENST00000373358 URB2Q14146 1524 aaKnown RBP21.82■■□□□ 1.08
PBDC1-202ENST00000373358 CFTRP13569 1480 aa21.77■■□□□ 1.08
PBDC1-202ENST00000373358 WIZO95785 1651 aa21.75■■□□□ 1.07
PBDC1-202ENST00000373358 CYB5RLQ6IPT4 315 aa21.74■■□□□ 1.07
PBDC1-202ENST00000373358 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
PBDC1-202ENST00000373358 ZNF608Q9ULD9 1512 aaPredicted RBP21.68■■□□□ 1.06
PBDC1-202ENST00000373358 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
PBDC1-202ENST00000373358 IFT140Q96RY7 1462 aa21.59■■□□□ 1.05
PBDC1-202ENST00000373358 EIF4G3O43432 1585 aaKnown RBP21.45■■□□□ 1.02
PBDC1-202ENST00000373358 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
PBDC1-202ENST00000373358 TOPBP1Q92547 1522 aa21.43■■□□□ 1.02
PBDC1-202ENST00000373358 CHD1O14646 1710 aa21.43■■□□□ 1.02
PBDC1-202ENST00000373358 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
PBDC1-202ENST00000373358 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
PBDC1-202ENST00000373358 PRDM2Q13029 1718 aa21.39■■□□□ 1.01
PBDC1-202ENST00000373358 AQRO60306 1485 aaKnown RBP eCLIP21.38■■□□□ 1.013e-7■□□□□ 9.7
PBDC1-202ENST00000373358 FBLN2P98095 1184 aa21.33■■□□□ 1.01
PBDC1-202ENST00000373358 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
PBDC1-202ENST00000373358 ABCC8Q09428 1581 aa21.28■■□□□ 1
PBDC1-202ENST00000373358 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
PBDC1-202ENST00000373358 CCDC88BA6NC98 1476 aa21.23■□□□□ 0.99
PBDC1-202ENST00000373358 CLASP1Q7Z460 1538 aa21.22■□□□□ 0.99
PBDC1-202ENST00000373358 POLA1P09884 1462 aaPredicted RBP21.16■□□□□ 0.98
PBDC1-202ENST00000373358 TDRD9Q8NDG6 1382 aaKnown RBP21.12■□□□□ 0.97
PBDC1-202ENST00000373358 RAD54L2Q9Y4B4 1467 aa21.12■□□□□ 0.97
PBDC1-202ENST00000373358 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
PBDC1-202ENST00000373358 SYNJ1O43426 1573 aa21.07■□□□□ 0.96
PBDC1-202ENST00000373358 CHMP7Q8WUX9 453 aaPredicted RBP21.05■□□□□ 0.96
PBDC1-202ENST00000373358 SOGA1O94964 1423 aa21.04■□□□□ 0.96
PBDC1-202ENST00000373358 GAPVD1Q14C86 1478 aa21.04■□□□□ 0.96
PBDC1-202ENST00000373358 MAGI1Q96QZ7 1491 aaPredicted RBP21■□□□□ 0.95
PBDC1-202ENST00000373358 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
PBDC1-202ENST00000373358 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
PBDC1-202ENST00000373358 GRIN2BQ13224 1484 aa20.94■□□□□ 0.94
PBDC1-202ENST00000373358 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
PBDC1-202ENST00000373358 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
PBDC1-202ENST00000373358 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
PBDC1-202ENST00000373358 CUX1P39880 1505 aa20.79■□□□□ 0.92
PBDC1-202ENST00000373358 KIF13AQ9H1H9 1805 aa20.77■□□□□ 0.92
PBDC1-202ENST00000373358 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
PBDC1-202ENST00000373358 KDM4FA0A1W2PPD8 638 aa20.73■□□□□ 0.91
PBDC1-202ENST00000373358 CEP170Q5SW79 1584 aa20.72■□□□□ 0.91
PBDC1-202ENST00000373358 NUP160Q12769 1436 aa20.67■□□□□ 0.9
PBDC1-202ENST00000373358 GRIN2AQ12879 1464 aa20.67■□□□□ 0.9
PBDC1-202ENST00000373358 ABCA5Q8WWZ7 1642 aa20.66■□□□□ 0.9
PBDC1-202ENST00000373358 SHROOM2Q13796 1616 aa20.64■□□□□ 0.89
PBDC1-202ENST00000373358 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
PBDC1-202ENST00000373358 ABCC10Q5T3U5 1492 aa20.59■□□□□ 0.89
PBDC1-202ENST00000373358 FAM69CQ0P6D2 419 aa20.59■□□□□ 0.89
PBDC1-202ENST00000373358 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
PBDC1-202ENST00000373358 PRG4Q92954 1404 aaPredicted RBP20.5■□□□□ 0.87
PBDC1-202ENST00000373358 DIP2BQ9P265 1576 aa20.49■□□□□ 0.87
PBDC1-202ENST00000373358 KDM6BO15054 1643 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms