Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL353726.2-201ENST00000623259 884 ntBASIC17.36■□□□□ 0.37
RFX7Q2KHR2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RFX7Q2KHR2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AL359881.3-201ENST00000602640 1721 ntBASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AC007952.5-201ENST00000572818 1486 ntBASIC17.35■□□□□ 0.37
RFX7Q2KHR2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 MBP-201ENST00000354542 575 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AC098935.1-201ENST00000446057 611 ntBASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AL512310.5-201ENST00000551999 515 ntBASIC17.35■□□□□ 0.37
RFX7Q2KHR2 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AC242376.2-201ENST00000619355 883 ntBASIC17.35■□□□□ 0.37
RFX7Q2KHR2 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 MST1P2-201ENST00000457982 2291 ntBASIC17.35■□□□□ 0.37
RFX7Q2KHR2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RFX7Q2KHR2 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 AC139749.1-202ENST00000617529 3139 ntBASIC17.34■□□□□ 0.37
RFX7Q2KHR2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 AC103592.1-201ENST00000394513 664 ntBASIC17.34■□□□□ 0.37
RFX7Q2KHR2 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 RPSAP31-201ENST00000416648 895 ntBASIC17.34■□□□□ 0.37
RFX7Q2KHR2 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 AC104784.1-201ENST00000473096 294 ntBASIC17.34■□□□□ 0.37
RFX7Q2KHR2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 AC007881.3-201ENST00000608897 607 ntBASIC17.34■□□□□ 0.37
RFX7Q2KHR2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 AL136379.1-201ENST00000623471 2642 ntBASIC17.34■□□□□ 0.37
RFX7Q2KHR2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RFX7Q2KHR2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms