RNA–Protein interactions for RNA: ENST00000544855.5

NDUFC1-211, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NDUFC1, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-211ENST00000544855 AEBP2Q6ZN18 517 aaPredicted RBP37.36■■■■□ 3.57
NDUFC1-211ENST00000544855 CHIC1Q5VXU3 224 aa36.19■■■■□ 3.38
NDUFC1-211ENST00000544855 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
NDUFC1-211ENST00000544855 PHF23Q9BUL5 403 aaPredicted RBP31.77■■■□□ 2.68
NDUFC1-211ENST00000544855 SENP3Q9H4L4 574 aaPredicted RBP31.77■■■□□ 2.68
NDUFC1-211ENST00000544855 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
NDUFC1-211ENST00000544855 ABCC9O60706 1549 aa30.13■■■□□ 2.41
NDUFC1-211ENST00000544855 FOXD1Q16676 465 aa29.51■■■□□ 2.31
NDUFC1-211ENST00000544855 PLPPR3Q6T4P5 718 aa29.23■■■□□ 2.27
NDUFC1-211ENST00000544855 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
NDUFC1-211ENST00000544855 NACADO15069 1562 aa29.05■■■□□ 2.24
NDUFC1-211ENST00000544855 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
NDUFC1-211ENST00000544855 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
NDUFC1-211ENST00000544855 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
NDUFC1-211ENST00000544855 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
NDUFC1-211ENST00000544855 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
NDUFC1-211ENST00000544855 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
NDUFC1-211ENST00000544855 PPP6R1Q9UPN7 881 aa28.13■■■□□ 2.09
NDUFC1-211ENST00000544855 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
NDUFC1-211ENST00000544855 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
NDUFC1-211ENST00000544855 ADRA2BP18089 450 aa28.06■■■□□ 2.08
NDUFC1-211ENST00000544855 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.07
NDUFC1-211ENST00000544855 PIAS4Q8N2W9 510 aaPredicted RBP27.72■■■□□ 2.03
NDUFC1-211ENST00000544855 DNAJC5BQ9UF47 199 aa27.62■■■□□ 2.01
NDUFC1-211ENST00000544855 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
NDUFC1-211ENST00000544855 MSH5O43196 834 aa27.37■■□□□ 1.97
NDUFC1-211ENST00000544855 CC2D2AQ9P2K1 1620 aa27.32■■□□□ 1.96
NDUFC1-211ENST00000544855 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
NDUFC1-211ENST00000544855 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
NDUFC1-211ENST00000544855 BAZ1AQ9NRL2 1556 aaPredicted RBP26.91■■□□□ 1.9
NDUFC1-211ENST00000544855 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
NDUFC1-211ENST00000544855 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
NDUFC1-211ENST00000544855 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
NDUFC1-211ENST00000544855 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
NDUFC1-211ENST00000544855 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.86
NDUFC1-211ENST00000544855 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
NDUFC1-211ENST00000544855 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
NDUFC1-211ENST00000544855 WIZO95785 1651 aa26.43■■□□□ 1.82
NDUFC1-211ENST00000544855 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
NDUFC1-211ENST00000544855 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
NDUFC1-211ENST00000544855 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
NDUFC1-211ENST00000544855 NESP48681 1621 aa26.07■■□□□ 1.76
NDUFC1-211ENST00000544855 ERCC6Q03468 1493 aa26■■□□□ 1.75
NDUFC1-211ENST00000544855 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
NDUFC1-211ENST00000544855 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
NDUFC1-211ENST00000544855 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
NDUFC1-211ENST00000544855 CFTRP13569 1480 aa25.83■■□□□ 1.73
NDUFC1-211ENST00000544855 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
NDUFC1-211ENST00000544855 CUX2O14529 1486 aa25.79■■□□□ 1.72
NDUFC1-211ENST00000544855 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
NDUFC1-211ENST00000544855 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
NDUFC1-211ENST00000544855 SCAF1Q9H7N4 1312 aaKnown RBP25.7■■□□□ 1.71
NDUFC1-211ENST00000544855 PPP4R3CPQ6ZMV5 832 aa25.69■■□□□ 1.7
NDUFC1-211ENST00000544855 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
NDUFC1-211ENST00000544855 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
NDUFC1-211ENST00000544855 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
NDUFC1-211ENST00000544855 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
NDUFC1-211ENST00000544855 WDR62O43379 1518 aa25.58■■□□□ 1.68
NDUFC1-211ENST00000544855 MAPK8IP2Q13387 824 aaPredicted RBP25.55■■□□□ 1.68
NDUFC1-211ENST00000544855 POTEDQ86YR6 584 aa25.48■■□□□ 1.67
NDUFC1-211ENST00000544855 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
NDUFC1-211ENST00000544855 DMRT2Q9Y5R5 561 aa25.32■■□□□ 1.64
NDUFC1-211ENST00000544855 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
NDUFC1-211ENST00000544855 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
NDUFC1-211ENST00000544855 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
NDUFC1-211ENST00000544855 IFT140Q96RY7 1462 aa25.12■■□□□ 1.61
NDUFC1-211ENST00000544855 CNKSR2Q8WXI2 1034 aa25.08■■□□□ 1.61
NDUFC1-211ENST00000544855 CUX1P39880 1505 aa25.06■■□□□ 1.6
NDUFC1-211ENST00000544855 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
NDUFC1-211ENST00000544855 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
NDUFC1-211ENST00000544855 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
NDUFC1-211ENST00000544855 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
NDUFC1-211ENST00000544855 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
NDUFC1-211ENST00000544855 NCBP3Q53F19 620 aaKnown RBP24.93■■□□□ 1.58
NDUFC1-211ENST00000544855 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
NDUFC1-211ENST00000544855 SOGA1O94964 1423 aa24.91■■□□□ 1.58
NDUFC1-211ENST00000544855 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
NDUFC1-211ENST00000544855 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
NDUFC1-211ENST00000544855 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
NDUFC1-211ENST00000544855 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
NDUFC1-211ENST00000544855 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
NDUFC1-211ENST00000544855 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
NDUFC1-211ENST00000544855 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.56
NDUFC1-211ENST00000544855 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
NDUFC1-211ENST00000544855 TDRD9Q8NDG6 1382 aaKnown RBP24.74■■□□□ 1.55
NDUFC1-211ENST00000544855 KCNA4P22459 653 aa24.71■■□□□ 1.55
NDUFC1-211ENST00000544855 ABCA5Q8WWZ7 1642 aa24.69■■□□□ 1.54
NDUFC1-211ENST00000544855 HOXD11P31277 338 aaPredicted RBP24.68■■□□□ 1.54
NDUFC1-211ENST00000544855 RNF216Q9NWF9 866 aaPredicted RBP24.67■■□□□ 1.54
NDUFC1-211ENST00000544855 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
NDUFC1-211ENST00000544855 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
NDUFC1-211ENST00000544855 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
NDUFC1-211ENST00000544855 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
NDUFC1-211ENST00000544855 CHD1O14646 1710 aa24.63■■□□□ 1.53
NDUFC1-211ENST00000544855 MAGI1Q96QZ7 1491 aaPredicted RBP24.62■■□□□ 1.53
NDUFC1-211ENST00000544855 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
NDUFC1-211ENST00000544855 NPM3O75607 178 aaKnown RBP24.56■■□□□ 1.52
NDUFC1-211ENST00000544855 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
NDUFC1-211ENST00000544855 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
NDUFC1-211ENST00000544855 FBLN2P98095 1184 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms