RNA–Protein interactions for RNA: ENST00000371953.7

PTEN-201, Transcript of phosphatase and tensin homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTEN, Length 9,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-201ENST00000371953 MYT1Q01538 1121 aa27.49■■□□□ 1.99
PTEN-201ENST00000371953 PELP1Q8IZL8 1130 aaKnown RBP27.44■■□□□ 1.98
PTEN-201ENST00000371953 DCAF8L2P0C7V8 631 aa27.39■■□□□ 1.97
PTEN-201ENST00000371953 CENPBP07199 599 aaPredicted RBP26.03■■□□□ 1.76
PTEN-201ENST00000371953 CCER1Q8TC90 406 aaPredicted RBP26■■□□□ 1.75
PTEN-201ENST00000371953 ERICH6Q7L0X2 663 aa25.95■■□□□ 1.74
PTEN-201ENST00000371953 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
PTEN-201ENST00000371953 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
PTEN-201ENST00000371953 ZEB1P37275 1124 aaPredicted RBP25.66■■□□□ 1.7
PTEN-201ENST00000371953 TTBK1Q5TCY1 1321 aaPredicted RBP25.48■■□□□ 1.67
PTEN-201ENST00000371953 SHROOM4Q9ULL8 1493 aa25.38■■□□□ 1.65
PTEN-201ENST00000371953 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
PTEN-201ENST00000371953 YTHDC1Q96MU7 727 aaKnown RBP25.23■■□□□ 1.63
PTEN-201ENST00000371953 APLP2Q06481 763 aa25.22■■□□□ 1.63
PTEN-201ENST00000371953 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
PTEN-201ENST00000371953 FAM9AQ8IZU1 332 aaPredicted RBP25.15■■□□□ 1.62
PTEN-201ENST00000371953 NEFLP07196 543 aa25.08■■□□□ 1.61
PTEN-201ENST00000371953 HRCP23327 699 aa24.62■■□□□ 1.53
PTEN-201ENST00000371953 DAXXQ9UER7 740 aaPredicted RBP24.5■■□□□ 1.51
PTEN-201ENST00000371953 RTL5Q5HYW3 569 aaPredicted RBP24.4■■□□□ 1.5
PTEN-201ENST00000371953 TRIM26Q12899 539 aaPredicted RBP24.23■■□□□ 1.47
PTEN-201ENST00000371953 ATP1B4Q9UN42 357 aaPredicted RBP24.23■■□□□ 1.47
PTEN-201ENST00000371953 RANGAP1P46060 587 aaPredicted RBP24.18■■□□□ 1.46
PTEN-201ENST00000371953 TRIM41Q8WV44 630 aa24.05■■□□□ 1.44
PTEN-201ENST00000371953 GLIPR1L2Q4G1C9 344 aa23.97■■□□□ 1.43
PTEN-201ENST00000371953 UBTFP17480 764 aaKnown RBP23.95■■□□□ 1.42
PTEN-201ENST00000371953 ZNF316A6NFI3 1004 aaPredicted RBP23.91■■□□□ 1.42
PTEN-201ENST00000371953 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.41
PTEN-201ENST00000371953 DIEXFQ68CQ4 756 aaKnown RBP23.81■■□□□ 1.4
PTEN-201ENST00000371953 GTF3C3Q9Y5Q9 886 aa23.77■■□□□ 1.39
PTEN-201ENST00000371953 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
PTEN-201ENST00000371953 CDK11AQ9UQ88 783 aaPredicted RBP23.55■■□□□ 1.36
PTEN-201ENST00000371953 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
PTEN-201ENST00000371953 ACIN1Q9UKV3 1341 aaKnown RBP23.47■■□□□ 1.35
PTEN-201ENST00000371953 EIF5BO60841 1220 aaKnown RBP23.47■■□□□ 1.35
PTEN-201ENST00000371953 ANP32AP39687 249 aaKnown RBP23.32■■□□□ 1.32
PTEN-201ENST00000371953 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.31■■□□□ 1.32
PTEN-201ENST00000371953 HNRNPUL2Q1KMD3 747 aaKnown RBP23.31■■□□□ 1.32
PTEN-201ENST00000371953 POLR3GLQ9BT43 218 aa23.26■■□□□ 1.31
PTEN-201ENST00000371953 ITGAEP38570 1179 aa23.16■■□□□ 1.3
PTEN-201ENST00000371953 ANP32BQ92688 251 aaKnown RBP23.1■■□□□ 1.29
PTEN-201ENST00000371953 SLC4A1APQ9BWU0 796 aaKnown RBP23.08■■□□□ 1.29
PTEN-201ENST00000371953 BCANQ96GW7 911 aa23.07■■□□□ 1.28
PTEN-201ENST00000371953 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
PTEN-201ENST00000371953 ANP32CO43423 234 aa22.91■■□□□ 1.26
PTEN-201ENST00000371953 CNGB1Q14028 1251 aaPredicted RBP22.87■■□□□ 1.25
PTEN-201ENST00000371953 SCAF1Q9H7N4 1312 aaKnown RBP22.81■■□□□ 1.24
PTEN-201ENST00000371953 ANP32EQ9BTT0 268 aa22.81■■□□□ 1.24
PTEN-201ENST00000371953 TNNT2P45379 298 aaPredicted RBP22.79■■□□□ 1.24
PTEN-201ENST00000371953 LOC105371045A0A1W2PR82 267 aa22.75■■□□□ 1.23
PTEN-201ENST00000371953 BCL11AQ9H165 835 aa22.7■■□□□ 1.22
PTEN-201ENST00000371953 FAM50AQ14320 339 aaKnown RBP22.67■■□□□ 1.22
PTEN-201ENST00000371953 NBR1Q14596 966 aa22.66■■□□□ 1.22
PTEN-201ENST00000371953 ZBTB47Q9UFB7 747 aaPredicted RBP22.66■■□□□ 1.22
PTEN-201ENST00000371953 FKBP8Q14318 412 aa22.59■■□□□ 1.21
PTEN-201ENST00000371953 DCAF1Q9Y4B6 1507 aa22.58■■□□□ 1.21
PTEN-201ENST00000371953 UPF2Q9HAU5 1272 aaKnown RBP22.57■■□□□ 1.2
PTEN-201ENST00000371953 NEUROD1Q13562 356 aa22.57■■□□□ 1.2
PTEN-201ENST00000371953 NPM2Q86SE8 214 aaKnown RBP22.56■■□□□ 1.2
PTEN-201ENST00000371953 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
PTEN-201ENST00000371953 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
PTEN-201ENST00000371953 ERICH6BQ5W0A0 696 aa22.51■■□□□ 1.19
PTEN-201ENST00000371953 HSP90AA1P07900 732 aaKnown RBP22.48■■□□□ 1.19
PTEN-201ENST00000371953 NCLP19338 710 aaKnown RBP22.45■■□□□ 1.18
PTEN-201ENST00000371953 TRIM44Q96DX7 344 aaPredicted RBP22.45■■□□□ 1.18
PTEN-201ENST00000371953 CANXP27824 592 aaKnown RBP22.42■■□□□ 1.18
PTEN-201ENST00000371953 SLC24A1O60721 1099 aa22.38■■□□□ 1.17
PTEN-201ENST00000371953 CDK11BP21127 795 aaKnown RBP22.38■■□□□ 1.17
PTEN-201ENST00000371953 ABCC9O60706 1549 aa22.37■■□□□ 1.17
PTEN-201ENST00000371953 NEFMP07197 916 aa22.34■■□□□ 1.17
PTEN-201ENST00000371953 DDRGK1Q96HY6 314 aa22.34■■□□□ 1.17
PTEN-201ENST00000371953 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
PTEN-201ENST00000371953 CCDC136Q96JN2 1154 aa22.25■■□□□ 1.15
PTEN-201ENST00000371953 FBLN2P98095 1184 aa22.22■■□□□ 1.15
PTEN-201ENST00000371953 BECN1Q14457 450 aa22.18■■□□□ 1.14
PTEN-201ENST00000371953 NAP1L5Q96NT1 182 aaPredicted RBP22.17■■□□□ 1.14
PTEN-201ENST00000371953 PABPN1Q86U42 306 aaKnown RBP eCLIP22.16■■□□□ 1.14
PTEN-201ENST00000371953 PPM1GO15355 546 aaPredicted RBP22.15■■□□□ 1.14
PTEN-201ENST00000371953 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
PTEN-201ENST00000371953 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
PTEN-201ENST00000371953 ARXQ96QS3 562 aa22.09■■□□□ 1.13
PTEN-201ENST00000371953 NOP58Q9Y2X3 529 aaKnown RBP22.04■■□□□ 1.12
PTEN-201ENST00000371953 GOLGA6L22H0YM25 854 aa22.03■■□□□ 1.12
PTEN-201ENST00000371953 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.03■■□□□ 1.12
PTEN-201ENST00000371953 RTN4Q9NQC3 1192 aaKnown RBP21.99■■□□□ 1.11
PTEN-201ENST00000371953 DEKP35659 375 aaKnown RBP21.98■■□□□ 1.11
PTEN-201ENST00000371953 ESF1Q9H501 851 aaKnown RBP21.98■■□□□ 1.11
PTEN-201ENST00000371953 DNTTIP2Q5QJE6 756 aaKnown RBP21.91■■□□□ 1.1
PTEN-201ENST00000371953 L1TD1Q5T7N2 865 aaKnown RBP21.87■■□□□ 1.09
PTEN-201ENST00000371953 MIER1Q8N108 512 aa21.87■■□□□ 1.09
PTEN-201ENST00000371953 TONSLQ96HA7 1378 aa21.85■■□□□ 1.09
PTEN-201ENST00000371953 ZNF777Q9ULD5 760 aaPredicted RBP21.84■■□□□ 1.09
PTEN-201ENST00000371953 STAG3Q9UJ98 1225 aa21.83■■□□□ 1.09
PTEN-201ENST00000371953 PTMAP06454 111 aaKnown RBP21.83■■□□□ 1.09
PTEN-201ENST00000371953 CHAF1AQ13111 956 aaPredicted RBP21.81■■□□□ 1.08
PTEN-201ENST00000371953 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
PTEN-201ENST00000371953 ARID3CA6NKF2 412 aa21.77■■□□□ 1.08
PTEN-201ENST00000371953 FAM9BQ8IZU0 186 aa21.76■■□□□ 1.07
PTEN-201ENST00000371953 SUPT16HQ9Y5B9 1047 aaKnown RBP21.75■■□□□ 1.07
PTEN-201ENST00000371953 DDX10Q13206 875 aaKnown RBP21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms