RNA–Protein interactions for RNA: ENST00000536957.5

PXN-207, Transcript of paxillin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PXN, Length 4,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-207ENST00000536957 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.18
PXN-207ENST00000536957 DCAF8L2P0C7V8 631 aa27.01■■□□□ 1.91
PXN-207ENST00000536957 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
PXN-207ENST00000536957 SHROOM4Q9ULL8 1493 aa26.53■■□□□ 1.84
PXN-207ENST00000536957 EHMT2Q96KQ7 1210 aa25.38■■□□□ 1.65
PXN-207ENST00000536957 PCGF6Q9BYE7 350 aa25.31■■□□□ 1.64
PXN-207ENST00000536957 FAM9AQ8IZU1 332 aaPredicted RBP24.97■■□□□ 1.59
PXN-207ENST00000536957 CHIC1Q5VXU3 224 aa24.66■■□□□ 1.54
PXN-207ENST00000536957 LOC105371045A0A1W2PR82 267 aa24.54■■□□□ 1.52
PXN-207ENST00000536957 HRCP23327 699 aa24.54■■□□□ 1.52
PXN-207ENST00000536957 TRIM41Q8WV44 630 aa24.53■■□□□ 1.52
PXN-207ENST00000536957 TTBK1Q5TCY1 1321 aaPredicted RBP24.53■■□□□ 1.52
PXN-207ENST00000536957 PPARGC1BQ86YN6 1023 aaKnown RBP24.36■■□□□ 1.49
PXN-207ENST00000536957 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
PXN-207ENST00000536957 ZEB1P37275 1124 aaPredicted RBP24.14■■□□□ 1.46
PXN-207ENST00000536957 CCER1Q8TC90 406 aaPredicted RBP24.12■■□□□ 1.45
PXN-207ENST00000536957 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
PXN-207ENST00000536957 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
PXN-207ENST00000536957 APLP2Q06481 763 aa23.96■■□□□ 1.43
PXN-207ENST00000536957 ABCC9O60706 1549 aa23.9■■□□□ 1.42
PXN-207ENST00000536957 UBTFP17480 764 aaKnown RBP23.86■■□□□ 1.41
PXN-207ENST00000536957 CCDC180Q9P1Z9 1646 aa23.75■■□□□ 1.39
PXN-207ENST00000536957 CENPBP07199 599 aaPredicted RBP23.72■■□□□ 1.39
PXN-207ENST00000536957 YTHDC1Q96MU7 727 aaKnown RBP23.63■■□□□ 1.37
PXN-207ENST00000536957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
PXN-207ENST00000536957 MYO15BQ96JP2 1530 aa23.51■■□□□ 1.35
PXN-207ENST00000536957 PELP1Q8IZL8 1130 aaKnown RBP23.45■■□□□ 1.34
PXN-207ENST00000536957 PABPN1Q86U42 306 aaKnown RBP eCLIP23.38■■□□□ 1.33
PXN-207ENST00000536957 HNRNPUL2Q1KMD3 747 aaKnown RBP23.36■■□□□ 1.33
PXN-207ENST00000536957 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
PXN-207ENST00000536957 ATP1B4Q9UN42 357 aaPredicted RBP23.27■■□□□ 1.32
PXN-207ENST00000536957 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
PXN-207ENST00000536957 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
PXN-207ENST00000536957 ITGAEP38570 1179 aa23.13■■□□□ 1.29
PXN-207ENST00000536957 GTF3C3Q9Y5Q9 886 aa22.97■■□□□ 1.27
PXN-207ENST00000536957 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
PXN-207ENST00000536957 ACIN1Q9UKV3 1341 aaKnown RBP22.8■■□□□ 1.24
PXN-207ENST00000536957 CSRNP3Q8WYN3 585 aa22.8■■□□□ 1.24
PXN-207ENST00000536957 CECR2Q9BXF3 1484 aa22.75■■□□□ 1.23
PXN-207ENST00000536957 ZNF316A6NFI3 1004 aaPredicted RBP22.74■■□□□ 1.23
PXN-207ENST00000536957 NEFLP07196 543 aa22.71■■□□□ 1.23
PXN-207ENST00000536957 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
PXN-207ENST00000536957 NEUROD1Q13562 356 aa22.65■■□□□ 1.22
PXN-207ENST00000536957 NACADO15069 1562 aa22.57■■□□□ 1.2
PXN-207ENST00000536957 MYT1Q01538 1121 aa22.56■■□□□ 1.2
PXN-207ENST00000536957 ERICH6Q7L0X2 663 aa22.54■■□□□ 1.2
PXN-207ENST00000536957 FAM50AQ14320 339 aaKnown RBP22.5■■□□□ 1.19
PXN-207ENST00000536957 RB1CC1Q8TDY2 1594 aa22.5■■□□□ 1.19
PXN-207ENST00000536957 MROH2BQ7Z745 1585 aa22.45■■□□□ 1.18
PXN-207ENST00000536957 CNGB1Q14028 1251 aaPredicted RBP22.43■■□□□ 1.18
PXN-207ENST00000536957 BCANQ96GW7 911 aa22.41■■□□□ 1.18
PXN-207ENST00000536957 POLR3GLQ9BT43 218 aa22.33■■□□□ 1.16
PXN-207ENST00000536957 MIER1Q8N108 512 aa22.32■■□□□ 1.16
PXN-207ENST00000536957 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
PXN-207ENST00000536957 CEP162Q5TB80 1403 aa22.26■■□□□ 1.15
PXN-207ENST00000536957 WIZO95785 1651 aa22.2■■□□□ 1.14
PXN-207ENST00000536957 BAZ1AQ9NRL2 1556 aaPredicted RBP22.16■■□□□ 1.14
PXN-207ENST00000536957 CLIP1P30622 1438 aa22.11■■□□□ 1.13
PXN-207ENST00000536957 TRIM52Q96A61 297 aa22.1■■□□□ 1.13
PXN-207ENST00000536957 ANP32CO43423 234 aa22.07■■□□□ 1.12
PXN-207ENST00000536957 SOGA1O94964 1423 aa22.06■■□□□ 1.12
PXN-207ENST00000536957 DDX10Q13206 875 aaKnown RBP22.04■■□□□ 1.12
PXN-207ENST00000536957 TNIKQ9UKE5 1360 aa22.04■■□□□ 1.12
PXN-207ENST00000536957 ABCC8Q09428 1581 aa22.04■■□□□ 1.12
PXN-207ENST00000536957 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
PXN-207ENST00000536957 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
PXN-207ENST00000536957 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
PXN-207ENST00000536957 HIRIP3Q9BW71 556 aaPredicted RBP21.97■■□□□ 1.11
PXN-207ENST00000536957 WRNQ14191 1432 aaPredicted RBP eCLIP21.97■■□□□ 1.11
PXN-207ENST00000536957 FKBP8Q14318 412 aa21.93■■□□□ 1.1
PXN-207ENST00000536957 EEA1Q15075 1411 aa21.93■■□□□ 1.1
PXN-207ENST00000536957 BAZ1BQ9UIG0 1483 aaKnown RBP21.9■■□□□ 1.1
PXN-207ENST00000536957 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
PXN-207ENST00000536957 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
PXN-207ENST00000536957 SMARCA4P51532 1647 aa21.75■■□□□ 1.07
PXN-207ENST00000536957 TOP2AP11388 1531 aaKnown RBP21.74■■□□□ 1.07
PXN-207ENST00000536957 TONSLQ96HA7 1378 aa21.74■■□□□ 1.07
PXN-207ENST00000536957 CDK11AQ9UQ88 783 aaPredicted RBP21.73■■□□□ 1.07
PXN-207ENST00000536957 RUSC2Q8N2Y8 1516 aa21.72■■□□□ 1.07
PXN-207ENST00000536957 HNRNPUQ00839 825 aaKnown RBP eCLIP21.72■■□□□ 1.07
PXN-207ENST00000536957 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
PXN-207ENST00000536957 CLSPNQ9HAW4 1339 aa21.68■■□□□ 1.06
PXN-207ENST00000536957 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
PXN-207ENST00000536957 KANK4Q5T7N3 995 aaPredicted RBP21.64■■□□□ 1.06
PXN-207ENST00000536957 MYT1LQ9UL68 1186 aa21.63■■□□□ 1.05
PXN-207ENST00000536957 IRX6P78412 446 aaPredicted RBP21.62■■□□□ 1.05
PXN-207ENST00000536957 FBLN2P98095 1184 aa21.61■■□□□ 1.05
PXN-207ENST00000536957 FAM9BQ8IZU0 186 aa21.61■■□□□ 1.05
PXN-207ENST00000536957 ATAD2BQ9ULI0 1458 aa21.59■■□□□ 1.05
PXN-207ENST00000536957 ZNF777Q9ULD5 760 aaPredicted RBP21.57■■□□□ 1.04
PXN-207ENST00000536957 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
PXN-207ENST00000536957 SMARCA2P51531 1590 aa21.56■■□□□ 1.04
PXN-207ENST00000536957 SUPT16HQ9Y5B9 1047 aaKnown RBP21.54■■□□□ 1.04
PXN-207ENST00000536957 DAXXQ9UER7 740 aaPredicted RBP21.54■■□□□ 1.04
PXN-207ENST00000536957 MTUS2Q5JR59 1369 aa21.51■■□□□ 1.03
PXN-207ENST00000536957 KIF27Q86VH2 1401 aa21.51■■□□□ 1.03
PXN-207ENST00000536957 RRP7BPQ9NSQ0 103 aa21.5■■□□□ 1.03
PXN-207ENST00000536957 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
PXN-207ENST00000536957 RTL5Q5HYW3 569 aaPredicted RBP21.48■■□□□ 1.03
PXN-207ENST00000536957 SENP3-EIF4A1A0A087X0R7 540 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms