RNA–Protein interactions for RNA: ENST00000393371.6

RASGEF1C-202, Transcript of RasGEF domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RASGEF1C, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1C-202ENST00000393371 NISCHQ9Y2I1 1504 aa31.06■■■□□ 2.56
RASGEF1C-202ENST00000393371 SHROOM4Q9ULL8 1493 aa26.46■■□□□ 1.83
RASGEF1C-202ENST00000393371 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
RASGEF1C-202ENST00000393371 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.78
RASGEF1C-202ENST00000393371 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
RASGEF1C-202ENST00000393371 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
RASGEF1C-202ENST00000393371 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
RASGEF1C-202ENST00000393371 ABCC9O60706 1549 aa24.92■■□□□ 1.58
RASGEF1C-202ENST00000393371 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
RASGEF1C-202ENST00000393371 SCRIBQ14160 1630 aa24.87■■□□□ 1.57
RASGEF1C-202ENST00000393371 MYO15BQ96JP2 1530 aa24.74■■□□□ 1.55
RASGEF1C-202ENST00000393371 NACADO15069 1562 aa24.54■■□□□ 1.52
RASGEF1C-202ENST00000393371 RSF1Q96T23 1441 aaPredicted RBP24.53■■□□□ 1.52
RASGEF1C-202ENST00000393371 CECR2Q9BXF3 1484 aa24.35■■□□□ 1.49
RASGEF1C-202ENST00000393371 LOC105371045A0A1W2PR82 267 aa24.25■■□□□ 1.47
RASGEF1C-202ENST00000393371 RB1CC1Q8TDY2 1594 aa24.21■■□□□ 1.47
RASGEF1C-202ENST00000393371 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
RASGEF1C-202ENST00000393371 WIZO95785 1651 aa24.04■■□□□ 1.44
RASGEF1C-202ENST00000393371 TRIM41Q8WV44 630 aa24■■□□□ 1.43
RASGEF1C-202ENST00000393371 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.41
RASGEF1C-202ENST00000393371 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
RASGEF1C-202ENST00000393371 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
RASGEF1C-202ENST00000393371 PABPN1Q86U42 306 aaKnown RBP eCLIP23.87■■□□□ 1.41
RASGEF1C-202ENST00000393371 BAZ1AQ9NRL2 1556 aaPredicted RBP23.84■■□□□ 1.41
RASGEF1C-202ENST00000393371 EHMT2Q96KQ7 1210 aa23.77■■□□□ 1.4
RASGEF1C-202ENST00000393371 SMARCA4P51532 1647 aa23.69■■□□□ 1.38
RASGEF1C-202ENST00000393371 BICRAQ9NZM4 1560 aa23.64■■□□□ 1.37
RASGEF1C-202ENST00000393371 HRCP23327 699 aa23.59■■□□□ 1.37
RASGEF1C-202ENST00000393371 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.36
RASGEF1C-202ENST00000393371 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
RASGEF1C-202ENST00000393371 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
RASGEF1C-202ENST00000393371 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
RASGEF1C-202ENST00000393371 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
RASGEF1C-202ENST00000393371 TRIM26Q12899 539 aaPredicted RBP23.4■■□□□ 1.34
RASGEF1C-202ENST00000393371 PPARGC1BQ86YN6 1023 aaKnown RBP23.31■■□□□ 1.32
RASGEF1C-202ENST00000393371 PEG3Q9GZU2 1588 aa23.21■■□□□ 1.31
RASGEF1C-202ENST00000393371 ATAD2BQ9ULI0 1458 aa23.2■■□□□ 1.3
RASGEF1C-202ENST00000393371 SOGA1O94964 1423 aa23.19■■□□□ 1.3
RASGEF1C-202ENST00000393371 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
RASGEF1C-202ENST00000393371 BAZ1BQ9UIG0 1483 aaKnown RBP23.1■■□□□ 1.29
RASGEF1C-202ENST00000393371 WRNQ14191 1432 aaPredicted RBP eCLIP23.02■■□□□ 1.28
RASGEF1C-202ENST00000393371 CSRNP3Q8WYN3 585 aa23■■□□□ 1.27
RASGEF1C-202ENST00000393371 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
RASGEF1C-202ENST00000393371 UBTFP17480 764 aaKnown RBP22.92■■□□□ 1.26
RASGEF1C-202ENST00000393371 TTBK1Q5TCY1 1321 aaPredicted RBP22.9■■□□□ 1.26
RASGEF1C-202ENST00000393371 CEP162Q5TB80 1403 aa22.87■■□□□ 1.25
RASGEF1C-202ENST00000393371 EEA1Q15075 1411 aa22.84■■□□□ 1.25
RASGEF1C-202ENST00000393371 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.25
RASGEF1C-202ENST00000393371 NCAPD3P42695 1498 aa22.77■■□□□ 1.24
RASGEF1C-202ENST00000393371 GOLGA3Q08378 1498 aa22.72■■□□□ 1.23
RASGEF1C-202ENST00000393371 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
RASGEF1C-202ENST00000393371 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
RASGEF1C-202ENST00000393371 ZEB1P37275 1124 aaPredicted RBP22.64■■□□□ 1.22
RASGEF1C-202ENST00000393371 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
RASGEF1C-202ENST00000393371 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
RASGEF1C-202ENST00000393371 TOP2BQ02880 1626 aa22.61■■□□□ 1.21
RASGEF1C-202ENST00000393371 RAPGEF2Q9Y4G8 1499 aa22.6■■□□□ 1.21
RASGEF1C-202ENST00000393371 KIF21BO75037 1637 aa22.56■■□□□ 1.2
RASGEF1C-202ENST00000393371 CUX1P39880 1505 aa22.52■■□□□ 1.2
RASGEF1C-202ENST00000393371 CFTRP13569 1480 aa22.52■■□□□ 1.2
RASGEF1C-202ENST00000393371 CLIP1P30622 1438 aa22.51■■□□□ 1.19
RASGEF1C-202ENST00000393371 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
RASGEF1C-202ENST00000393371 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
RASGEF1C-202ENST00000393371 CC2D2AQ9P2K1 1620 aa22.37■■□□□ 1.17
RASGEF1C-202ENST00000393371 PRXQ9BXM0 1461 aa22.36■■□□□ 1.17
RASGEF1C-202ENST00000393371 CADPSQ9ULU8 1353 aa22.35■■□□□ 1.17
RASGEF1C-202ENST00000393371 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
RASGEF1C-202ENST00000393371 KIF27Q86VH2 1401 aa22.32■■□□□ 1.16
RASGEF1C-202ENST00000393371 HNRNPUL2Q1KMD3 747 aaKnown RBP22.28■■□□□ 1.16
RASGEF1C-202ENST00000393371 APLP2Q06481 763 aa22.26■■□□□ 1.15
RASGEF1C-202ENST00000393371 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
RASGEF1C-202ENST00000393371 CUX2O14529 1486 aa22.2■■□□□ 1.15
RASGEF1C-202ENST00000393371 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
RASGEF1C-202ENST00000393371 ARAP1Q96P48 1450 aa22.18■■□□□ 1.14
RASGEF1C-202ENST00000393371 IGF1RP08069 1367 aa22.17■■□□□ 1.14
RASGEF1C-202ENST00000393371 FGD5Q6ZNL6 1462 aa22.16■■□□□ 1.14
RASGEF1C-202ENST00000393371 NESP48681 1621 aa22.15■■□□□ 1.14
RASGEF1C-202ENST00000393371 KANK4Q5T7N3 995 aaPredicted RBP22.14■■□□□ 1.14
RASGEF1C-202ENST00000393371 DNAJC5BQ9UF47 199 aa22.14■■□□□ 1.13
RASGEF1C-202ENST00000393371 FANCD2Q9BXW9 1451 aa22.13■■□□□ 1.13
RASGEF1C-202ENST00000393371 CARMIL1Q5VZK9 1371 aa22.05■■□□□ 1.12
RASGEF1C-202ENST00000393371 ARHGAP35Q9NRY4 1499 aa22.05■■□□□ 1.12
RASGEF1C-202ENST00000393371 RAD54L2Q9Y4B4 1467 aa22.04■■□□□ 1.12
RASGEF1C-202ENST00000393371 TOPBP1Q92547 1522 aa21.95■■□□□ 1.1
RASGEF1C-202ENST00000393371 P3H3Q8IVL6 736 aa21.95■■□□□ 1.1
RASGEF1C-202ENST00000393371 POLA1P09884 1462 aaPredicted RBP21.94■■□□□ 1.1
RASGEF1C-202ENST00000393371 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
RASGEF1C-202ENST00000393371 DIEXFQ68CQ4 756 aaKnown RBP21.87■■□□□ 1.09
RASGEF1C-202ENST00000393371 ABCA10Q8WWZ4 1543 aa21.85■■□□□ 1.09
RASGEF1C-202ENST00000393371 URB2Q14146 1524 aaKnown RBP21.84■■□□□ 1.09
RASGEF1C-202ENST00000393371 ITGAEP38570 1179 aa21.83■■□□□ 1.08
RASGEF1C-202ENST00000393371 ATP1B4Q9UN42 357 aaPredicted RBP21.81■■□□□ 1.08
RASGEF1C-202ENST00000393371 TDRD9Q8NDG6 1382 aaKnown RBP21.8■■□□□ 1.08
RASGEF1C-202ENST00000393371 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
RASGEF1C-202ENST00000393371 RRBP1Q9P2E9 1410 aaKnown RBP21.77■■□□□ 1.08
RASGEF1C-202ENST00000393371 ZNF316A6NFI3 1004 aaPredicted RBP21.76■■□□□ 1.07
RASGEF1C-202ENST00000393371 CCNB3Q8WWL7 1395 aa21.74■■□□□ 1.07
RASGEF1C-202ENST00000393371 FHOD3Q2V2M9 1422 aa21.74■■□□□ 1.07
RASGEF1C-202ENST00000393371 DHX57Q6P158 1386 aaKnown RBP21.71■■□□□ 1.07
RASGEF1C-202ENST00000393371 PDS5BQ9NTI5 1447 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms