RNA–Protein interactions for RNA: ENST00000316227.3

PRIMA1-201, Transcript of proline rich membrane anchor 1, humanhuman

TSL 1 (best) BASIC

Gene PRIMA1, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-201ENST00000316227 NISCHQ9Y2I1 1504 aa34.55■■■■□ 3.12
PRIMA1-201ENST00000316227 CCDC180Q9P1Z9 1646 aa30.6■■■□□ 2.49
PRIMA1-201ENST00000316227 ABCC9O60706 1549 aa30.37■■■□□ 2.45
PRIMA1-201ENST00000316227 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
PRIMA1-201ENST00000316227 DNAJC5BQ9UF47 199 aa28.83■■■□□ 2.21
PRIMA1-201ENST00000316227 NACADO15069 1562 aa28.79■■■□□ 2.2
PRIMA1-201ENST00000316227 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
PRIMA1-201ENST00000316227 ZCCHC6Q5VYS8 1495 aaKnown RBP28.78■■■□□ 2.2
PRIMA1-201ENST00000316227 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
PRIMA1-201ENST00000316227 DCAF1Q9Y4B6 1507 aa28.58■■■□□ 2.17
PRIMA1-201ENST00000316227 PABPN1Q86U42 306 aaKnown RBP eCLIP28.29■■■□□ 2.12
PRIMA1-201ENST00000316227 UNC13AQ9UPW8 1703 aa28.09■■■□□ 2.09
PRIMA1-201ENST00000316227 BICRAQ9NZM4 1560 aa27.97■■■□□ 2.07
PRIMA1-201ENST00000316227 SCRIBQ14160 1630 aa27.96■■■□□ 2.07
PRIMA1-201ENST00000316227 SHROOM4Q9ULL8 1493 aa27.64■■■□□ 2.02
PRIMA1-201ENST00000316227 CC2D2AQ9P2K1 1620 aa27.39■■□□□ 1.98
PRIMA1-201ENST00000316227 CECR2Q9BXF3 1484 aa27.37■■□□□ 1.97
PRIMA1-201ENST00000316227 EIF4G1Q04637 1599 aaKnown RBP27.25■■□□□ 1.95
PRIMA1-201ENST00000316227 SMARCA4P51532 1647 aa26.76■■□□□ 1.87
PRIMA1-201ENST00000316227 BAZ1AQ9NRL2 1556 aaPredicted RBP26.75■■□□□ 1.87
PRIMA1-201ENST00000316227 MROH2BQ7Z745 1585 aa26.64■■□□□ 1.86
PRIMA1-201ENST00000316227 ATAD2BQ9ULI0 1458 aa26.64■■□□□ 1.86
PRIMA1-201ENST00000316227 NCAPD3P42695 1498 aa26.62■■□□□ 1.85
PRIMA1-201ENST00000316227 DNAJC5Q9H3Z4 198 aa26.61■■□□□ 1.85
PRIMA1-201ENST00000316227 SMARCA2P51531 1590 aa26.57■■□□□ 1.84
PRIMA1-201ENST00000316227 PEG3Q9GZU2 1588 aa26.51■■□□□ 1.83
PRIMA1-201ENST00000316227 HMGXB3Q12766 1538 aa26.45■■□□□ 1.83
PRIMA1-201ENST00000316227 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.82
PRIMA1-201ENST00000316227 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
PRIMA1-201ENST00000316227 WIZO95785 1651 aa26.31■■□□□ 1.8
PRIMA1-201ENST00000316227 CUX2O14529 1486 aa26.23■■□□□ 1.79
PRIMA1-201ENST00000316227 ERCC6Q03468 1493 aa26.2■■□□□ 1.78
PRIMA1-201ENST00000316227 TOP2AP11388 1531 aaKnown RBP26.04■■□□□ 1.76
PRIMA1-201ENST00000316227 NESP48681 1621 aa26.03■■□□□ 1.76
PRIMA1-201ENST00000316227 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
PRIMA1-201ENST00000316227 LAMC3Q9Y6N6 1575 aa25.84■■□□□ 1.73
PRIMA1-201ENST00000316227 CCDC88BA6NC98 1476 aa25.79■■□□□ 1.72
PRIMA1-201ENST00000316227 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
PRIMA1-201ENST00000316227 THOC2Q8NI27 1593 aaKnown RBP25.74■■□□□ 1.71
PRIMA1-201ENST00000316227 CFTRP13569 1480 aa25.71■■□□□ 1.71
PRIMA1-201ENST00000316227 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
PRIMA1-201ENST00000316227 KIF21AQ7Z4S6 1674 aa25.61■■□□□ 1.69
PRIMA1-201ENST00000316227 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
PRIMA1-201ENST00000316227 CEP164Q9UPV0 1460 aa25.47■■□□□ 1.67
PRIMA1-201ENST00000316227 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
PRIMA1-201ENST00000316227 PRDM2Q13029 1718 aa25.37■■□□□ 1.65
PRIMA1-201ENST00000316227 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
PRIMA1-201ENST00000316227 WDR62O43379 1518 aa25.34■■□□□ 1.65
PRIMA1-201ENST00000316227 URB2Q14146 1524 aaKnown RBP25.29■■□□□ 1.64
PRIMA1-201ENST00000316227 TOPBP1Q92547 1522 aa25.13■■□□□ 1.61
PRIMA1-201ENST00000316227 ABCC8Q09428 1581 aa25.11■■□□□ 1.61
PRIMA1-201ENST00000316227 DNMBPQ6XZF7 1577 aa25.08■■□□□ 1.61
PRIMA1-201ENST00000316227 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
PRIMA1-201ENST00000316227 CUX1P39880 1505 aa24.98■■□□□ 1.59
PRIMA1-201ENST00000316227 IFT140Q96RY7 1462 aa24.95■■□□□ 1.58
PRIMA1-201ENST00000316227 POLA1P09884 1462 aaPredicted RBP24.93■■□□□ 1.58
PRIMA1-201ENST00000316227 FGD5Q6ZNL6 1462 aa24.88■■□□□ 1.57
PRIMA1-201ENST00000316227 ZNF608Q9ULD9 1512 aaPredicted RBP24.86■■□□□ 1.57
PRIMA1-201ENST00000316227 WRNQ14191 1432 aaPredicted RBP eCLIP24.85■■□□□ 1.57
PRIMA1-201ENST00000316227 TARBP1Q13395 1621 aaKnown RBP24.84■■□□□ 1.57
PRIMA1-201ENST00000316227 SOGA1O94964 1423 aa24.84■■□□□ 1.57
PRIMA1-201ENST00000316227 RAD54L2Q9Y4B4 1467 aa24.83■■□□□ 1.57
PRIMA1-201ENST00000316227 SYNJ1O43426 1573 aa24.76■■□□□ 1.55
PRIMA1-201ENST00000316227 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
PRIMA1-201ENST00000316227 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.55
PRIMA1-201ENST00000316227 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
PRIMA1-201ENST00000316227 RIMBP3CA6NJZ7 1639 aa24.72■■□□□ 1.55
PRIMA1-201ENST00000316227 RIMBP3BA6NNM3 1639 aa24.72■■□□□ 1.55
PRIMA1-201ENST00000316227 RIMBP3Q9UFD9 1639 aa24.72■■□□□ 1.55
PRIMA1-201ENST00000316227 TDRD9Q8NDG6 1382 aaKnown RBP24.71■■□□□ 1.55
PRIMA1-201ENST00000316227 EIF4G3O43432 1585 aaKnown RBP24.7■■□□□ 1.54
PRIMA1-201ENST00000316227 ABCA10Q8WWZ4 1543 aa24.64■■□□□ 1.53
PRIMA1-201ENST00000316227 ARHGEF11O15085 1522 aa24.61■■□□□ 1.53
PRIMA1-201ENST00000316227 WDR97A6NE52 1622 aa24.6■■□□□ 1.53
PRIMA1-201ENST00000316227 GAPVD1Q14C86 1478 aa24.54■■□□□ 1.52
PRIMA1-201ENST00000316227 GRIN2BQ13224 1484 aa24.52■■□□□ 1.52
PRIMA1-201ENST00000316227 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
PRIMA1-201ENST00000316227 ABCA5Q8WWZ7 1642 aa24.5■■□□□ 1.51
PRIMA1-201ENST00000316227 SNAPC4Q5SXM2 1469 aa24.47■■□□□ 1.51
PRIMA1-201ENST00000316227 FBLN2P98095 1184 aa24.45■■□□□ 1.5
PRIMA1-201ENST00000316227 CHD1O14646 1710 aa24.44■■□□□ 1.5
PRIMA1-201ENST00000316227 MAGI1Q96QZ7 1491 aaPredicted RBP24.44■■□□□ 1.5
PRIMA1-201ENST00000316227 PBRM1Q86U86 1689 aa24.39■■□□□ 1.49
PRIMA1-201ENST00000316227 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
PRIMA1-201ENST00000316227 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
PRIMA1-201ENST00000316227 SYNJ2O15056 1496 aa24.35■■□□□ 1.49
PRIMA1-201ENST00000316227 ERICH3Q5RHP9 1530 aa24.33■■□□□ 1.49
PRIMA1-201ENST00000316227 TRHP20396 242 aaPredicted RBP24.32■■□□□ 1.48
PRIMA1-201ENST00000316227 KIF27Q86VH2 1401 aa24.32■■□□□ 1.48
PRIMA1-201ENST00000316227 IGF1RP08069 1367 aa24.27■■□□□ 1.48
PRIMA1-201ENST00000316227 FHAD1B1AJZ9 1412 aa24.27■■□□□ 1.48
PRIMA1-201ENST00000316227 ADAMTS12P58397 1594 aa24.26■■□□□ 1.47
PRIMA1-201ENST00000316227 GRIN2AQ12879 1464 aa24.2■■□□□ 1.47
PRIMA1-201ENST00000316227 CLASP1Q7Z460 1538 aa24.17■■□□□ 1.46
PRIMA1-201ENST00000316227 RUSC2Q8N2Y8 1516 aa24.15■■□□□ 1.46
PRIMA1-201ENST00000316227 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
PRIMA1-201ENST00000316227 NUP160Q12769 1436 aa24.11■■□□□ 1.45
PRIMA1-201ENST00000316227 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
PRIMA1-201ENST00000316227 CUL7Q14999 1698 aa24.08■■□□□ 1.44
PRIMA1-201ENST00000316227 CEP170Q5SW79 1584 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms