RNA–Protein interactions for RNA: ENST00000539002.5

NDUFC1-209, Transcript of NADH:ubiquinone oxidoreductase subunit C1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFC1, Length 1,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFC1-209ENST00000539002 NISCHQ9Y2I1 1504 aa34.68■■■■□ 3.14
NDUFC1-209ENST00000539002 CCDC180Q9P1Z9 1646 aa30.93■■■□□ 2.54
NDUFC1-209ENST00000539002 ABCC9O60706 1549 aa30.13■■■□□ 2.41
NDUFC1-209ENST00000539002 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
NDUFC1-209ENST00000539002 NACADO15069 1562 aa29.05■■■□□ 2.24
NDUFC1-209ENST00000539002 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
NDUFC1-209ENST00000539002 ZCCHC6Q5VYS8 1495 aaKnown RBP28.91■■■□□ 2.22
NDUFC1-209ENST00000539002 MYO15BQ96JP2 1530 aa28.9■■■□□ 2.22
NDUFC1-209ENST00000539002 DCAF8L2P0C7V8 631 aa28.83■■■□□ 2.21
NDUFC1-209ENST00000539002 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
NDUFC1-209ENST00000539002 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
NDUFC1-209ENST00000539002 BICRAQ9NZM4 1560 aa28.17■■■□□ 2.1
NDUFC1-209ENST00000539002 SCRIBQ14160 1630 aa28.12■■■□□ 2.09
NDUFC1-209ENST00000539002 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
NDUFC1-209ENST00000539002 SHROOM4Q9ULL8 1493 aa27.95■■■□□ 2.07
NDUFC1-209ENST00000539002 DNAJC5BQ9UF47 199 aa27.62■■■□□ 2.01
NDUFC1-209ENST00000539002 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
NDUFC1-209ENST00000539002 CHIC1Q5VXU3 224 aa27.35■■□□□ 1.97
NDUFC1-209ENST00000539002 CC2D2AQ9P2K1 1620 aa27.32■■□□□ 1.96
NDUFC1-209ENST00000539002 CECR2Q9BXF3 1484 aa27.11■■□□□ 1.93
NDUFC1-209ENST00000539002 SMARCA4P51532 1647 aa26.94■■□□□ 1.9
NDUFC1-209ENST00000539002 BAZ1AQ9NRL2 1556 aaPredicted RBP26.91■■□□□ 1.9
NDUFC1-209ENST00000539002 SMARCA2P51531 1590 aa26.77■■□□□ 1.88
NDUFC1-209ENST00000539002 NCAPD3P42695 1498 aa26.77■■□□□ 1.88
NDUFC1-209ENST00000539002 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
NDUFC1-209ENST00000539002 PEG3Q9GZU2 1588 aa26.71■■□□□ 1.87
NDUFC1-209ENST00000539002 MROH2BQ7Z745 1585 aa26.7■■□□□ 1.86
NDUFC1-209ENST00000539002 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
NDUFC1-209ENST00000539002 BAZ1BQ9UIG0 1483 aaKnown RBP26.55■■□□□ 1.84
NDUFC1-209ENST00000539002 WIZO95785 1651 aa26.43■■□□□ 1.82
NDUFC1-209ENST00000539002 RSF1Q96T23 1441 aaPredicted RBP26.38■■□□□ 1.81
NDUFC1-209ENST00000539002 TOP2AP11388 1531 aaKnown RBP26.18■■□□□ 1.78
NDUFC1-209ENST00000539002 LAMC3Q9Y6N6 1575 aa26.1■■□□□ 1.77
NDUFC1-209ENST00000539002 NESP48681 1621 aa26.07■■□□□ 1.76
NDUFC1-209ENST00000539002 ERCC6Q03468 1493 aa26■■□□□ 1.75
NDUFC1-209ENST00000539002 CADPSQ9ULU8 1353 aa25.96■■□□□ 1.75
NDUFC1-209ENST00000539002 PDS5BQ9NTI5 1447 aa25.88■■□□□ 1.73
NDUFC1-209ENST00000539002 KIF21AQ7Z4S6 1674 aa25.84■■□□□ 1.73
NDUFC1-209ENST00000539002 CFTRP13569 1480 aa25.83■■□□□ 1.73
NDUFC1-209ENST00000539002 CCDC88BA6NC98 1476 aa25.82■■□□□ 1.72
NDUFC1-209ENST00000539002 CUX2O14529 1486 aa25.79■■□□□ 1.72
NDUFC1-209ENST00000539002 THOC2Q8NI27 1593 aaKnown RBP25.78■■□□□ 1.72
NDUFC1-209ENST00000539002 PRDM2Q13029 1718 aa25.74■■□□□ 1.71
NDUFC1-209ENST00000539002 FANCD2Q9BXW9 1451 aa25.66■■□□□ 1.7
NDUFC1-209ENST00000539002 CEP164Q9UPV0 1460 aa25.66■■□□□ 1.7
NDUFC1-209ENST00000539002 MRC2Q9UBG0 1479 aa25.62■■□□□ 1.69
NDUFC1-209ENST00000539002 SUPT5HO00267 1087 aaKnown RBP25.59■■□□□ 1.69
NDUFC1-209ENST00000539002 WDR62O43379 1518 aa25.58■■□□□ 1.68
NDUFC1-209ENST00000539002 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
NDUFC1-209ENST00000539002 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
NDUFC1-209ENST00000539002 TOPBP1Q92547 1522 aa25.27■■□□□ 1.64
NDUFC1-209ENST00000539002 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
NDUFC1-209ENST00000539002 IFT140Q96RY7 1462 aa25.12■■□□□ 1.61
NDUFC1-209ENST00000539002 CUX1P39880 1505 aa25.06■■□□□ 1.6
NDUFC1-209ENST00000539002 POLA1P09884 1462 aaPredicted RBP25.05■■□□□ 1.6
NDUFC1-209ENST00000539002 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
NDUFC1-209ENST00000539002 FGD5Q6ZNL6 1462 aa24.97■■□□□ 1.59
NDUFC1-209ENST00000539002 ZNF608Q9ULD9 1512 aaPredicted RBP24.96■■□□□ 1.59
NDUFC1-209ENST00000539002 DNAJC5Q9H3Z4 198 aa24.94■■□□□ 1.58
NDUFC1-209ENST00000539002 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
NDUFC1-209ENST00000539002 SOGA1O94964 1423 aa24.91■■□□□ 1.58
NDUFC1-209ENST00000539002 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
NDUFC1-209ENST00000539002 RAD54L2Q9Y4B4 1467 aa24.89■■□□□ 1.58
NDUFC1-209ENST00000539002 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
NDUFC1-209ENST00000539002 WRNQ14191 1432 aaPredicted RBP eCLIP24.88■■□□□ 1.57
NDUFC1-209ENST00000539002 TOP2BQ02880 1626 aa24.87■■□□□ 1.57
NDUFC1-209ENST00000539002 SYNJ1O43426 1573 aa24.84■■□□□ 1.57
NDUFC1-209ENST00000539002 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.56
NDUFC1-209ENST00000539002 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
NDUFC1-209ENST00000539002 TDRD9Q8NDG6 1382 aaKnown RBP24.74■■□□□ 1.55
NDUFC1-209ENST00000539002 ABCA5Q8WWZ7 1642 aa24.69■■□□□ 1.54
NDUFC1-209ENST00000539002 PBRM1Q86U86 1689 aa24.66■■□□□ 1.54
NDUFC1-209ENST00000539002 GRIN2BQ13224 1484 aa24.65■■□□□ 1.54
NDUFC1-209ENST00000539002 GAPVD1Q14C86 1478 aa24.65■■□□□ 1.54
NDUFC1-209ENST00000539002 OSCARQ8IYS5 282 aa24.64■■□□□ 1.54
NDUFC1-209ENST00000539002 CHD1O14646 1710 aa24.63■■□□□ 1.53
NDUFC1-209ENST00000539002 MAGI1Q96QZ7 1491 aaPredicted RBP24.62■■□□□ 1.53
NDUFC1-209ENST00000539002 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
NDUFC1-209ENST00000539002 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
NDUFC1-209ENST00000539002 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
NDUFC1-209ENST00000539002 ERICH3Q5RHP9 1530 aa24.48■■□□□ 1.51
NDUFC1-209ENST00000539002 FBLN2P98095 1184 aa24.46■■□□□ 1.51
NDUFC1-209ENST00000539002 ADAMTS12P58397 1594 aa24.45■■□□□ 1.5
NDUFC1-209ENST00000539002 CHMP7Q8WUX9 453 aaPredicted RBP24.43■■□□□ 1.5
NDUFC1-209ENST00000539002 FHAD1B1AJZ9 1412 aa24.37■■□□□ 1.49
NDUFC1-209ENST00000539002 KIF27Q86VH2 1401 aa24.37■■□□□ 1.49
NDUFC1-209ENST00000539002 GRIN2AQ12879 1464 aa24.35■■□□□ 1.49
NDUFC1-209ENST00000539002 CLASP1Q7Z460 1538 aa24.35■■□□□ 1.49
NDUFC1-209ENST00000539002 RIMBP3CA6NJZ7 1639 aa24.3■■□□□ 1.48
NDUFC1-209ENST00000539002 RIMBP3BA6NNM3 1639 aa24.3■■□□□ 1.48
NDUFC1-209ENST00000539002 RIMBP3Q9UFD9 1639 aa24.3■■□□□ 1.48
NDUFC1-209ENST00000539002 ARHGEF11O15085 1522 aa24.29■■□□□ 1.48
NDUFC1-209ENST00000539002 PHF23Q9BUL5 403 aaPredicted RBP24.28■■□□□ 1.48
NDUFC1-209ENST00000539002 CUL7Q14999 1698 aa24.27■■□□□ 1.48
NDUFC1-209ENST00000539002 IGF1RP08069 1367 aa24.25■■□□□ 1.47
NDUFC1-209ENST00000539002 NUP160Q12769 1436 aa24.25■■□□□ 1.47
NDUFC1-209ENST00000539002 CEP170Q5SW79 1584 aa24.23■■□□□ 1.47
NDUFC1-209ENST00000539002 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
NDUFC1-209ENST00000539002 CARMIL1Q5VZK9 1371 aa24.12■■□□□ 1.45
NDUFC1-209ENST00000539002 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms