RNA–Protein interactions for RNA: ENST00000343810.8

MCRS1-201, Transcript of microspherule protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCRS1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCRS1-201ENST00000343810 NISCHQ9Y2I1 1504 aa32.37■■■□□ 2.77
MCRS1-201ENST00000343810 CCDC180Q9P1Z9 1646 aa28.19■■■□□ 2.1
MCRS1-201ENST00000343810 ZCCHC6Q5VYS8 1495 aaKnown RBP27.22■■□□□ 1.95
MCRS1-201ENST00000343810 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
MCRS1-201ENST00000343810 DCAF1Q9Y4B6 1507 aa26.73■■□□□ 1.87
MCRS1-201ENST00000343810 ABCC9O60706 1549 aa26.64■■□□□ 1.86
MCRS1-201ENST00000343810 SHROOM4Q9ULL8 1493 aa26.53■■□□□ 1.84
MCRS1-201ENST00000343810 MYO15BQ96JP2 1530 aa26.37■■□□□ 1.81
MCRS1-201ENST00000343810 NACADO15069 1562 aa26.23■■□□□ 1.79
MCRS1-201ENST00000343810 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
MCRS1-201ENST00000343810 SCRIBQ14160 1630 aa26■■□□□ 1.75
MCRS1-201ENST00000343810 SUPT5HO00267 1087 aaKnown RBP25.53■■□□□ 1.68
MCRS1-201ENST00000343810 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
MCRS1-201ENST00000343810 BICRAQ9NZM4 1560 aa25.22■■□□□ 1.63
MCRS1-201ENST00000343810 CECR2Q9BXF3 1484 aa25.16■■□□□ 1.62
MCRS1-201ENST00000343810 RSF1Q96T23 1441 aaPredicted RBP25.14■■□□□ 1.61
MCRS1-201ENST00000343810 PABPN1Q86U42 306 aaKnown RBP eCLIP25.14■■□□□ 1.61
MCRS1-201ENST00000343810 MROH2BQ7Z745 1585 aa25.03■■□□□ 1.6
MCRS1-201ENST00000343810 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
MCRS1-201ENST00000343810 SMARCA4P51532 1647 aa24.89■■□□□ 1.57
MCRS1-201ENST00000343810 WIZO95785 1651 aa24.85■■□□□ 1.57
MCRS1-201ENST00000343810 TOP2AP11388 1531 aaKnown RBP24.58■■□□□ 1.52
MCRS1-201ENST00000343810 PEG3Q9GZU2 1588 aa24.55■■□□□ 1.52
MCRS1-201ENST00000343810 EIF4G1Q04637 1599 aaKnown RBP24.47■■□□□ 1.51
MCRS1-201ENST00000343810 ATAD2BQ9ULI0 1458 aa24.44■■□□□ 1.5
MCRS1-201ENST00000343810 SMARCA2P51531 1590 aa24.43■■□□□ 1.5
MCRS1-201ENST00000343810 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
MCRS1-201ENST00000343810 BAZ1BQ9UIG0 1483 aaKnown RBP24.34■■□□□ 1.49
MCRS1-201ENST00000343810 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
MCRS1-201ENST00000343810 NCAPD3P42695 1498 aa24.2■■□□□ 1.46
MCRS1-201ENST00000343810 HMGXB3Q12766 1538 aa24.19■■□□□ 1.46
MCRS1-201ENST00000343810 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
MCRS1-201ENST00000343810 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
MCRS1-201ENST00000343810 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
MCRS1-201ENST00000343810 CFTRP13569 1480 aa23.7■■□□□ 1.38
MCRS1-201ENST00000343810 WRNQ14191 1432 aaPredicted RBP eCLIP23.68■■□□□ 1.38
MCRS1-201ENST00000343810 PRDM2Q13029 1718 aa23.6■■□□□ 1.37
MCRS1-201ENST00000343810 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
MCRS1-201ENST00000343810 CADPSQ9ULU8 1353 aa23.6■■□□□ 1.37
MCRS1-201ENST00000343810 FAM9AQ8IZU1 332 aaPredicted RBP23.58■■□□□ 1.37
MCRS1-201ENST00000343810 LOC105371045A0A1W2PR82 267 aa23.53■■□□□ 1.36
MCRS1-201ENST00000343810 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
MCRS1-201ENST00000343810 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
MCRS1-201ENST00000343810 BIVM-ERCC5R4GMW8 1640 aa23.45■■□□□ 1.34
MCRS1-201ENST00000343810 NESP48681 1621 aa23.41■■□□□ 1.34
MCRS1-201ENST00000343810 SOGA1O94964 1423 aa23.41■■□□□ 1.34
MCRS1-201ENST00000343810 CUX1P39880 1505 aa23.4■■□□□ 1.34
MCRS1-201ENST00000343810 LAMC3Q9Y6N6 1575 aa23.38■■□□□ 1.33
MCRS1-201ENST00000343810 FANCD2Q9BXW9 1451 aa23.36■■□□□ 1.33
MCRS1-201ENST00000343810 EEA1Q15075 1411 aa23.34■■□□□ 1.33
MCRS1-201ENST00000343810 RUSC2Q8N2Y8 1516 aa23.32■■□□□ 1.32
MCRS1-201ENST00000343810 EHMT2Q96KQ7 1210 aa23.29■■□□□ 1.32
MCRS1-201ENST00000343810 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
MCRS1-201ENST00000343810 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
MCRS1-201ENST00000343810 PDS5BQ9NTI5 1447 aa23.2■■□□□ 1.3
MCRS1-201ENST00000343810 DNMBPQ6XZF7 1577 aa23.17■■□□□ 1.3
MCRS1-201ENST00000343810 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.3
MCRS1-201ENST00000343810 KIF21AQ7Z4S6 1674 aa23.14■■□□□ 1.29
MCRS1-201ENST00000343810 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
MCRS1-201ENST00000343810 URB2Q14146 1524 aaKnown RBP23.07■■□□□ 1.28
MCRS1-201ENST00000343810 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
MCRS1-201ENST00000343810 KIF21BO75037 1637 aa23.06■■□□□ 1.28
MCRS1-201ENST00000343810 GOLGA3Q08378 1498 aa23.06■■□□□ 1.28
MCRS1-201ENST00000343810 POLA1P09884 1462 aaPredicted RBP23.02■■□□□ 1.27
MCRS1-201ENST00000343810 CUX2O14529 1486 aa23.01■■□□□ 1.27
MCRS1-201ENST00000343810 TNIKQ9UKE5 1360 aa22.97■■□□□ 1.27
MCRS1-201ENST00000343810 UBTFP17480 764 aaKnown RBP22.96■■□□□ 1.27
MCRS1-201ENST00000343810 RAD54L2Q9Y4B4 1467 aa22.95■■□□□ 1.26
MCRS1-201ENST00000343810 RAPGEF2Q9Y4G8 1499 aa22.94■■□□□ 1.26
MCRS1-201ENST00000343810 MRC2Q9UBG0 1479 aa22.92■■□□□ 1.26
MCRS1-201ENST00000343810 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
MCRS1-201ENST00000343810 PRXQ9BXM0 1461 aa22.91■■□□□ 1.26
MCRS1-201ENST00000343810 CEP162Q5TB80 1403 aa22.89■■□□□ 1.26
MCRS1-201ENST00000343810 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.26
MCRS1-201ENST00000343810 WDR97A6NE52 1622 aa22.86■■□□□ 1.25
MCRS1-201ENST00000343810 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
MCRS1-201ENST00000343810 IGF1RP08069 1367 aa22.83■■□□□ 1.25
MCRS1-201ENST00000343810 WDR62O43379 1518 aa22.79■■□□□ 1.24
MCRS1-201ENST00000343810 TARBP1Q13395 1621 aaKnown RBP22.76■■□□□ 1.23
MCRS1-201ENST00000343810 ABCA5Q8WWZ7 1642 aa22.74■■□□□ 1.23
MCRS1-201ENST00000343810 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
MCRS1-201ENST00000343810 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
MCRS1-201ENST00000343810 TDRD9Q8NDG6 1382 aaKnown RBP22.71■■□□□ 1.23
MCRS1-201ENST00000343810 CLIP1P30622 1438 aa22.7■■□□□ 1.22
MCRS1-201ENST00000343810 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
MCRS1-201ENST00000343810 CUL7Q14999 1698 aa22.68■■□□□ 1.22
MCRS1-201ENST00000343810 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
MCRS1-201ENST00000343810 RANGAP1P46060 587 aaPredicted RBP22.62■■□□□ 1.21
MCRS1-201ENST00000343810 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
MCRS1-201ENST00000343810 AQRO60306 1485 aaKnown RBP eCLIP22.56■■□□□ 1.21e-7■■■■□ 22.2
MCRS1-201ENST00000343810 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
MCRS1-201ENST00000343810 PCGF6Q9BYE7 350 aa22.53■■□□□ 1.2
MCRS1-201ENST00000343810 VPS8Q8N3P4 1428 aa22.5■■□□□ 1.19
MCRS1-201ENST00000343810 GRIN2BQ13224 1484 aa22.49■■□□□ 1.19
MCRS1-201ENST00000343810 TRIM26Q12899 539 aaPredicted RBP22.49■■□□□ 1.19
MCRS1-201ENST00000343810 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
MCRS1-201ENST00000343810 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
MCRS1-201ENST00000343810 PPARGC1BQ86YN6 1023 aaKnown RBP22.46■■□□□ 1.19
MCRS1-201ENST00000343810 CTTNBP2Q8WZ74 1663 aa22.46■■□□□ 1.19
MCRS1-201ENST00000343810 ADAMTS12P58397 1594 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms