RNA–Protein interactions for RNA: ENST00000563393.1

PPCDC-205, Transcript of phosphopantothenoylcysteine decarboxylase, humanhuman

TSL 1 (best) BASIC

Gene PPCDC, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPCDC-205ENST00000563393 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
PPCDC-205ENST00000563393 CCDC180Q9P1Z9 1646 aa30.8■■■□□ 2.52
PPCDC-205ENST00000563393 ABCC9O60706 1549 aa30.09■■■□□ 2.41
PPCDC-205ENST00000563393 NACADO15069 1562 aa29■■■□□ 2.23
PPCDC-205ENST00000563393 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
PPCDC-205ENST00000563393 MYO15BQ96JP2 1530 aa28.94■■■□□ 2.22
PPCDC-205ENST00000563393 ZCCHC6Q5VYS8 1495 aaKnown RBP28.9■■■□□ 2.22
PPCDC-205ENST00000563393 DCAF8L2P0C7V8 631 aa28.8■■■□□ 2.2
PPCDC-205ENST00000563393 DCAF1Q9Y4B6 1507 aa28.79■■■□□ 2.2
PPCDC-205ENST00000563393 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
PPCDC-205ENST00000563393 BICRAQ9NZM4 1560 aa28.22■■■□□ 2.11
PPCDC-205ENST00000563393 PABPN1Q86U42 306 aaKnown RBP eCLIP28.15■■■□□ 2.1
PPCDC-205ENST00000563393 SCRIBQ14160 1630 aa28■■■□□ 2.07
PPCDC-205ENST00000563393 SHROOM4Q9ULL8 1493 aa27.89■■■□□ 2.05
PPCDC-205ENST00000563393 DNAJC5BQ9UF47 199 aa27.84■■■□□ 2.05
PPCDC-205ENST00000563393 EIF4G1Q04637 1599 aaKnown RBP27.39■■□□□ 1.97
PPCDC-205ENST00000563393 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
PPCDC-205ENST00000563393 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
PPCDC-205ENST00000563393 SMARCA4P51532 1647 aa26.87■■□□□ 1.89
PPCDC-205ENST00000563393 BAZ1AQ9NRL2 1556 aaPredicted RBP26.84■■□□□ 1.89
PPCDC-205ENST00000563393 NCAPD3P42695 1498 aa26.84■■□□□ 1.89
PPCDC-205ENST00000563393 ATAD2BQ9ULI0 1458 aa26.8■■□□□ 1.88
PPCDC-205ENST00000563393 MROH2BQ7Z745 1585 aa26.74■■□□□ 1.87
PPCDC-205ENST00000563393 PEG3Q9GZU2 1588 aa26.72■■□□□ 1.87
PPCDC-205ENST00000563393 SMARCA2P51531 1590 aa26.7■■□□□ 1.86
PPCDC-205ENST00000563393 HMGXB3Q12766 1538 aa26.62■■□□□ 1.85
PPCDC-205ENST00000563393 RSF1Q96T23 1441 aaPredicted RBP26.47■■□□□ 1.83
PPCDC-205ENST00000563393 BAZ1BQ9UIG0 1483 aaKnown RBP26.46■■□□□ 1.83
PPCDC-205ENST00000563393 WIZO95785 1651 aa26.39■■□□□ 1.82
PPCDC-205ENST00000563393 TOP2AP11388 1531 aaKnown RBP26.12■■□□□ 1.77
PPCDC-205ENST00000563393 NESP48681 1621 aa26.09■■□□□ 1.77
PPCDC-205ENST00000563393 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
PPCDC-205ENST00000563393 CADPSQ9ULU8 1353 aa26■■□□□ 1.75
PPCDC-205ENST00000563393 CCDC88BA6NC98 1476 aa25.87■■□□□ 1.73
PPCDC-205ENST00000563393 CFTRP13569 1480 aa25.86■■□□□ 1.73
PPCDC-205ENST00000563393 ERCC6Q03468 1493 aa25.85■■□□□ 1.73
PPCDC-205ENST00000563393 PDS5BQ9NTI5 1447 aa25.84■■□□□ 1.73
PPCDC-205ENST00000563393 CUX2O14529 1486 aa25.72■■□□□ 1.71
PPCDC-205ENST00000563393 KIF21AQ7Z4S6 1674 aa25.72■■□□□ 1.71
PPCDC-205ENST00000563393 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
PPCDC-205ENST00000563393 FANCD2Q9BXW9 1451 aa25.63■■□□□ 1.69
PPCDC-205ENST00000563393 SUPT5HO00267 1087 aaKnown RBP25.6■■□□□ 1.69
PPCDC-205ENST00000563393 MRC2Q9UBG0 1479 aa25.56■■□□□ 1.68
PPCDC-205ENST00000563393 CEP164Q9UPV0 1460 aa25.56■■□□□ 1.68
PPCDC-205ENST00000563393 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
PPCDC-205ENST00000563393 WDR62O43379 1518 aa25.52■■□□□ 1.68
PPCDC-205ENST00000563393 URB2Q14146 1524 aaKnown RBP25.42■■□□□ 1.66
PPCDC-205ENST00000563393 ABCC8Q09428 1581 aa25.26■■□□□ 1.63
PPCDC-205ENST00000563393 TOPBP1Q92547 1522 aa25.25■■□□□ 1.63
PPCDC-205ENST00000563393 DNMBPQ6XZF7 1577 aa25.18■■□□□ 1.62
PPCDC-205ENST00000563393 IFT140Q96RY7 1462 aa25.08■■□□□ 1.6
PPCDC-205ENST00000563393 CUX1P39880 1505 aa25.07■■□□□ 1.6
PPCDC-205ENST00000563393 DNAJC5Q9H3Z4 198 aa25.05■■□□□ 1.6
PPCDC-205ENST00000563393 POLA1P09884 1462 aaPredicted RBP25.03■■□□□ 1.6
PPCDC-205ENST00000563393 TARBP1Q13395 1621 aaKnown RBP25.01■■□□□ 1.59
PPCDC-205ENST00000563393 ZNF608Q9ULD9 1512 aaPredicted RBP24.98■■□□□ 1.59
PPCDC-205ENST00000563393 FGD5Q6ZNL6 1462 aa24.94■■□□□ 1.58
PPCDC-205ENST00000563393 SOGA1O94964 1423 aa24.93■■□□□ 1.58
PPCDC-205ENST00000563393 RAD54L2Q9Y4B4 1467 aa24.91■■□□□ 1.58
PPCDC-205ENST00000563393 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
PPCDC-205ENST00000563393 AQRO60306 1485 aaKnown RBP eCLIP24.83■■□□□ 1.57
PPCDC-205ENST00000563393 TOP2BQ02880 1626 aa24.83■■□□□ 1.57
PPCDC-205ENST00000563393 BIVM-ERCC5R4GMW8 1640 aa24.83■■□□□ 1.56
PPCDC-205ENST00000563393 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
PPCDC-205ENST00000563393 EIF4G3O43432 1585 aaKnown RBP24.8■■□□□ 1.56
PPCDC-205ENST00000563393 TDRD9Q8NDG6 1382 aaKnown RBP24.79■■□□□ 1.56
PPCDC-205ENST00000563393 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
PPCDC-205ENST00000563393 ABCA10Q8WWZ4 1543 aa24.76■■□□□ 1.55
PPCDC-205ENST00000563393 OSCARQ8IYS5 282 aa24.67■■□□□ 1.54
PPCDC-205ENST00000563393 ABCA5Q8WWZ7 1642 aa24.63■■□□□ 1.53
PPCDC-205ENST00000563393 GRIN2BQ13224 1484 aa24.62■■□□□ 1.53
PPCDC-205ENST00000563393 GAPVD1Q14C86 1478 aa24.62■■□□□ 1.53
PPCDC-205ENST00000563393 MAGI1Q96QZ7 1491 aaPredicted RBP24.57■■□□□ 1.52
PPCDC-205ENST00000563393 SNAPC4Q5SXM2 1469 aa24.55■■□□□ 1.52
PPCDC-205ENST00000563393 PBRM1Q86U86 1689 aa24.5■■□□□ 1.51
PPCDC-205ENST00000563393 CHD1O14646 1710 aa24.49■■□□□ 1.51
PPCDC-205ENST00000563393 SYNJ2O15056 1496 aa24.46■■□□□ 1.51
PPCDC-205ENST00000563393 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
PPCDC-205ENST00000563393 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
PPCDC-205ENST00000563393 FBLN2P98095 1184 aa24.4■■□□□ 1.5
PPCDC-205ENST00000563393 IGF1RP08069 1367 aa24.37■■□□□ 1.49
PPCDC-205ENST00000563393 FHAD1B1AJZ9 1412 aa24.35■■□□□ 1.49
PPCDC-205ENST00000563393 ADAMTS12P58397 1594 aa24.34■■□□□ 1.49
PPCDC-205ENST00000563393 KIF27Q86VH2 1401 aa24.34■■□□□ 1.49
PPCDC-205ENST00000563393 CLASP1Q7Z460 1538 aa24.33■■□□□ 1.49
PPCDC-205ENST00000563393 GRIN2AQ12879 1464 aa24.31■■□□□ 1.48
PPCDC-205ENST00000563393 NUP160Q12769 1436 aa24.27■■□□□ 1.48
PPCDC-205ENST00000563393 ARHGEF11O15085 1522 aa24.24■■□□□ 1.47
PPCDC-205ENST00000563393 RIMBP3CA6NJZ7 1639 aa24.22■■□□□ 1.47
PPCDC-205ENST00000563393 RIMBP3BA6NNM3 1639 aa24.22■■□□□ 1.47
PPCDC-205ENST00000563393 RIMBP3Q9UFD9 1639 aa24.22■■□□□ 1.47
PPCDC-205ENST00000563393 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
PPCDC-205ENST00000563393 CEP170Q5SW79 1584 aa24.19■■□□□ 1.46
PPCDC-205ENST00000563393 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
PPCDC-205ENST00000563393 CUL7Q14999 1698 aa24.14■■□□□ 1.45
PPCDC-205ENST00000563393 CARMIL1Q5VZK9 1371 aa24.14■■□□□ 1.45
PPCDC-205ENST00000563393 SHROOM2Q13796 1616 aa24.07■■□□□ 1.44
PPCDC-205ENST00000563393 ARAP1Q96P48 1450 aa24.07■■□□□ 1.44
PPCDC-205ENST00000563393 CHIC1Q5VXU3 224 aa24.04■■□□□ 1.44
PPCDC-205ENST00000563393 JPH4Q96JJ6 628 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms