RNA–Protein interactions for RNA: ENST00000523047.3

SMIM23-202, Transcript of small integral membrane protein 23, humanhuman

APPRIS P5 TSL 2 BASIC

Gene SMIM23, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM23-202ENST00000523047 NISCHQ9Y2I1 1504 aa35.15■■■■□ 3.22
SMIM23-202ENST00000523047 ABCC9O60706 1549 aa31.64■■■□□ 2.66
SMIM23-202ENST00000523047 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
SMIM23-202ENST00000523047 RB1CC1Q8TDY2 1594 aa30.09■■■□□ 2.41
SMIM23-202ENST00000523047 NACADO15069 1562 aa29.84■■■□□ 2.37
SMIM23-202ENST00000523047 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
SMIM23-202ENST00000523047 DNAJC5BQ9UF47 199 aa29.58■■■□□ 2.33
SMIM23-202ENST00000523047 UNC13AQ9UPW8 1703 aa29.42■■■□□ 2.3
SMIM23-202ENST00000523047 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.3
SMIM23-202ENST00000523047 MYO15BQ96JP2 1530 aa29.36■■■□□ 2.29
SMIM23-202ENST00000523047 BICRAQ9NZM4 1560 aa29.18■■■□□ 2.26
SMIM23-202ENST00000523047 ZCCHC6Q5VYS8 1495 aaKnown RBP29.15■■■□□ 2.26
SMIM23-202ENST00000523047 DCAF1Q9Y4B6 1507 aa28.99■■■□□ 2.23
SMIM23-202ENST00000523047 SCRIBQ14160 1630 aa28.85■■■□□ 2.21
SMIM23-202ENST00000523047 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
SMIM23-202ENST00000523047 CC2D2AQ9P2K1 1620 aa28.57■■■□□ 2.16
SMIM23-202ENST00000523047 EIF4G1Q04637 1599 aaKnown RBP28.5■■■□□ 2.15
SMIM23-202ENST00000523047 CECR2Q9BXF3 1484 aa28.48■■■□□ 2.15
SMIM23-202ENST00000523047 NCAPD3P42695 1498 aa27.51■■□□□ 1.99
SMIM23-202ENST00000523047 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
SMIM23-202ENST00000523047 ATAD2BQ9ULI0 1458 aa27.45■■□□□ 1.99
SMIM23-202ENST00000523047 SMARCA2P51531 1590 aa27.41■■□□□ 1.98
SMIM23-202ENST00000523047 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
SMIM23-202ENST00000523047 ERCC6Q03468 1493 aa27.35■■□□□ 1.97
SMIM23-202ENST00000523047 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
SMIM23-202ENST00000523047 CUX2O14529 1486 aa27.25■■□□□ 1.95
SMIM23-202ENST00000523047 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
SMIM23-202ENST00000523047 DNAJC5Q9H3Z4 198 aa27.18■■□□□ 1.94
SMIM23-202ENST00000523047 NESP48681 1621 aa27.16■■□□□ 1.94
SMIM23-202ENST00000523047 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.94
SMIM23-202ENST00000523047 MROH2BQ7Z745 1585 aa27.09■■□□□ 1.93
SMIM23-202ENST00000523047 LAMC3Q9Y6N6 1575 aa26.96■■□□□ 1.91
SMIM23-202ENST00000523047 THOC2Q8NI27 1593 aaKnown RBP26.91■■□□□ 1.9
SMIM23-202ENST00000523047 KIF21AQ7Z4S6 1674 aa26.85■■□□□ 1.89
SMIM23-202ENST00000523047 WIZO95785 1651 aa26.81■■□□□ 1.88
SMIM23-202ENST00000523047 PDS5BQ9NTI5 1447 aa26.79■■□□□ 1.88
SMIM23-202ENST00000523047 CADPSQ9ULU8 1353 aa26.69■■□□□ 1.86
SMIM23-202ENST00000523047 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
SMIM23-202ENST00000523047 WDR62O43379 1518 aa26.51■■□□□ 1.83
SMIM23-202ENST00000523047 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
SMIM23-202ENST00000523047 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
SMIM23-202ENST00000523047 TOP2AP11388 1531 aaKnown RBP26.46■■□□□ 1.83
SMIM23-202ENST00000523047 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
SMIM23-202ENST00000523047 CFTRP13569 1480 aa26.38■■□□□ 1.81
SMIM23-202ENST00000523047 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
SMIM23-202ENST00000523047 PRDM2Q13029 1718 aa26.2■■□□□ 1.79
SMIM23-202ENST00000523047 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
SMIM23-202ENST00000523047 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
SMIM23-202ENST00000523047 OSCARQ8IYS5 282 aa25.95■■□□□ 1.74
SMIM23-202ENST00000523047 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
SMIM23-202ENST00000523047 TOPBP1Q92547 1522 aa25.92■■□□□ 1.74
SMIM23-202ENST00000523047 ZNF608Q9ULD9 1512 aaPredicted RBP25.89■■□□□ 1.74
SMIM23-202ENST00000523047 DNMBPQ6XZF7 1577 aa25.85■■□□□ 1.73
SMIM23-202ENST00000523047 ABCC8Q09428 1581 aa25.83■■□□□ 1.73
SMIM23-202ENST00000523047 EIF4G3O43432 1585 aaKnown RBP25.81■■□□□ 1.72
SMIM23-202ENST00000523047 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.7
SMIM23-202ENST00000523047 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.7
SMIM23-202ENST00000523047 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.7
SMIM23-202ENST00000523047 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.7
SMIM23-202ENST00000523047 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
SMIM23-202ENST00000523047 AQRO60306 1485 aaKnown RBP eCLIP25.65■■□□□ 1.7
SMIM23-202ENST00000523047 CHD1O14646 1710 aa25.62■■□□□ 1.69
SMIM23-202ENST00000523047 ARHGEF11O15085 1522 aa25.61■■□□□ 1.69
SMIM23-202ENST00000523047 RAD54L2Q9Y4B4 1467 aa25.57■■□□□ 1.68
SMIM23-202ENST00000523047 FBLN2P98095 1184 aa25.53■■□□□ 1.68
SMIM23-202ENST00000523047 SOGA1O94964 1423 aa25.53■■□□□ 1.68
SMIM23-202ENST00000523047 FGD5Q6ZNL6 1462 aa25.52■■□□□ 1.68
SMIM23-202ENST00000523047 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
SMIM23-202ENST00000523047 CUX1P39880 1505 aa25.47■■□□□ 1.67
SMIM23-202ENST00000523047 SNAPC4Q5SXM2 1469 aa25.43■■□□□ 1.66
SMIM23-202ENST00000523047 WDR97A6NE52 1622 aa25.43■■□□□ 1.66
SMIM23-202ENST00000523047 CYB5RLQ6IPT4 315 aa25.38■■□□□ 1.65
SMIM23-202ENST00000523047 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
SMIM23-202ENST00000523047 ARAP1Q96P48 1450 aa25.34■■□□□ 1.65
SMIM23-202ENST00000523047 MAGI1Q96QZ7 1491 aaPredicted RBP25.33■■□□□ 1.65
SMIM23-202ENST00000523047 GRIN2BQ13224 1484 aa25.32■■□□□ 1.64
SMIM23-202ENST00000523047 CHMP7Q8WUX9 453 aaPredicted RBP25.29■■□□□ 1.64
SMIM23-202ENST00000523047 SYNJ1O43426 1573 aa25.29■■□□□ 1.64
SMIM23-202ENST00000523047 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
SMIM23-202ENST00000523047 CLASP1Q7Z460 1538 aa25.27■■□□□ 1.64
SMIM23-202ENST00000523047 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
SMIM23-202ENST00000523047 GAPVD1Q14C86 1478 aa25.23■■□□□ 1.63
SMIM23-202ENST00000523047 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
SMIM23-202ENST00000523047 ABCA10Q8WWZ4 1543 aa25.19■■□□□ 1.62
SMIM23-202ENST00000523047 TRHP20396 242 aaPredicted RBP25.17■■□□□ 1.62
SMIM23-202ENST00000523047 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
SMIM23-202ENST00000523047 BIVM-ERCC5R4GMW8 1640 aa25.08■■□□□ 1.6
SMIM23-202ENST00000523047 TOP2BQ02880 1626 aa25.06■■□□□ 1.6
SMIM23-202ENST00000523047 ADAMTS12P58397 1594 aa25.02■■□□□ 1.6
SMIM23-202ENST00000523047 GRIN2AQ12879 1464 aa25.01■■□□□ 1.59
SMIM23-202ENST00000523047 CEP170Q5SW79 1584 aa24.94■■□□□ 1.58
SMIM23-202ENST00000523047 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.58
SMIM23-202ENST00000523047 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.58
SMIM23-202ENST00000523047 NUP160Q12769 1436 aa24.88■■□□□ 1.57
SMIM23-202ENST00000523047 ERICH3Q5RHP9 1530 aa24.88■■□□□ 1.57
SMIM23-202ENST00000523047 SHROOM2Q13796 1616 aa24.8■■□□□ 1.56
SMIM23-202ENST00000523047 RUSC2Q8N2Y8 1516 aa24.68■■□□□ 1.54
SMIM23-202ENST00000523047 PRG4Q92954 1404 aaPredicted RBP24.68■■□□□ 1.54
SMIM23-202ENST00000523047 JPH4Q96JJ6 628 aa24.6■■□□□ 1.53
SMIM23-202ENST00000523047 CUL7Q14999 1698 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms