RNA–Protein interactions for RNA: ENST00000534726.5

SNX19-213, Transcript of sorting nexin 19, humanhuman

TSL 1 (best) BASIC

Gene SNX19, Length 1,656 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-213ENST00000534726 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
SNX19-213ENST00000534726 CCDC180Q9P1Z9 1646 aa28.26■■■□□ 2.11
SNX19-213ENST00000534726 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
SNX19-213ENST00000534726 DCAF1Q9Y4B6 1507 aa26.87■■□□□ 1.89
SNX19-213ENST00000534726 MYO15BQ96JP2 1530 aa26.61■■□□□ 1.85
SNX19-213ENST00000534726 DCAF8L2P0C7V8 631 aa26.53■■□□□ 1.84
SNX19-213ENST00000534726 ABCC9O60706 1549 aa26.51■■□□□ 1.83
SNX19-213ENST00000534726 NACADO15069 1562 aa26.36■■□□□ 1.81
SNX19-213ENST00000534726 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
SNX19-213ENST00000534726 SHROOM4Q9ULL8 1493 aa26.06■■□□□ 1.76
SNX19-213ENST00000534726 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
SNX19-213ENST00000534726 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
SNX19-213ENST00000534726 SUPT5HO00267 1087 aaKnown RBP25.17■■□□□ 1.62
SNX19-213ENST00000534726 BICRAQ9NZM4 1560 aa25.16■■□□□ 1.62
SNX19-213ENST00000534726 RSF1Q96T23 1441 aaPredicted RBP25.02■■□□□ 1.6
SNX19-213ENST00000534726 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
SNX19-213ENST00000534726 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
SNX19-213ENST00000534726 CECR2Q9BXF3 1484 aa24.96■■□□□ 1.59
SNX19-213ENST00000534726 MROH2BQ7Z745 1585 aa24.85■■□□□ 1.57
SNX19-213ENST00000534726 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
SNX19-213ENST00000534726 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
SNX19-213ENST00000534726 WIZO95785 1651 aa24.61■■□□□ 1.53
SNX19-213ENST00000534726 SMARCA2P51531 1590 aa24.49■■□□□ 1.51
SNX19-213ENST00000534726 TOP2AP11388 1531 aaKnown RBP24.49■■□□□ 1.51
SNX19-213ENST00000534726 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
SNX19-213ENST00000534726 ATAD2BQ9ULI0 1458 aa24.42■■□□□ 1.5
SNX19-213ENST00000534726 NCAPD3P42695 1498 aa24.31■■□□□ 1.48
SNX19-213ENST00000534726 BAZ1BQ9UIG0 1483 aaKnown RBP24.29■■□□□ 1.48
SNX19-213ENST00000534726 HMGXB3Q12766 1538 aa24.25■■□□□ 1.47
SNX19-213ENST00000534726 CCDC88BA6NC98 1476 aa24.19■■□□□ 1.46
SNX19-213ENST00000534726 CHIC1Q5VXU3 224 aa24.17■■□□□ 1.46
SNX19-213ENST00000534726 CC2D2AQ9P2K1 1620 aa24.06■■□□□ 1.44
SNX19-213ENST00000534726 TRIM41Q8WV44 630 aa23.81■■□□□ 1.4
SNX19-213ENST00000534726 CFTRP13569 1480 aa23.72■■□□□ 1.39
SNX19-213ENST00000534726 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
SNX19-213ENST00000534726 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
SNX19-213ENST00000534726 PRDM2Q13029 1718 aa23.57■■□□□ 1.36
SNX19-213ENST00000534726 ABCC8Q09428 1581 aa23.55■■□□□ 1.36
SNX19-213ENST00000534726 LAMC3Q9Y6N6 1575 aa23.47■■□□□ 1.35
SNX19-213ENST00000534726 EEA1Q15075 1411 aa23.39■■□□□ 1.34
SNX19-213ENST00000534726 TOP2BQ02880 1626 aa23.39■■□□□ 1.34
SNX19-213ENST00000534726 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
SNX19-213ENST00000534726 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
SNX19-213ENST00000534726 DNAJC5BQ9UF47 199 aa23.32■■□□□ 1.32
SNX19-213ENST00000534726 PDS5BQ9NTI5 1447 aa23.32■■□□□ 1.32
SNX19-213ENST00000534726 FANCD2Q9BXW9 1451 aa23.32■■□□□ 1.32
SNX19-213ENST00000534726 CUX1P39880 1505 aa23.25■■□□□ 1.31
SNX19-213ENST00000534726 NESP48681 1621 aa23.23■■□□□ 1.31
SNX19-213ENST00000534726 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
SNX19-213ENST00000534726 FAM9AQ8IZU1 332 aaPredicted RBP23.16■■□□□ 1.3
SNX19-213ENST00000534726 SOGA1O94964 1423 aa23.16■■□□□ 1.3
SNX19-213ENST00000534726 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
SNX19-213ENST00000534726 DNMBPQ6XZF7 1577 aa23.14■■□□□ 1.29
SNX19-213ENST00000534726 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
SNX19-213ENST00000534726 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
SNX19-213ENST00000534726 KIF27Q86VH2 1401 aa23.05■■□□□ 1.28
SNX19-213ENST00000534726 FGD5Q6ZNL6 1462 aa23.02■■□□□ 1.28
SNX19-213ENST00000534726 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
SNX19-213ENST00000534726 KIF21AQ7Z4S6 1674 aa22.99■■□□□ 1.27
SNX19-213ENST00000534726 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
SNX19-213ENST00000534726 KIF21BO75037 1637 aa22.95■■□□□ 1.26
SNX19-213ENST00000534726 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
SNX19-213ENST00000534726 POLA1P09884 1462 aaPredicted RBP22.93■■□□□ 1.26
SNX19-213ENST00000534726 GOLGA3Q08378 1498 aa22.93■■□□□ 1.26
SNX19-213ENST00000534726 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
SNX19-213ENST00000534726 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
SNX19-213ENST00000534726 CUX2O14529 1486 aa22.88■■□□□ 1.25
SNX19-213ENST00000534726 ERICH3Q5RHP9 1530 aa22.85■■□□□ 1.25
SNX19-213ENST00000534726 PRXQ9BXM0 1461 aa22.85■■□□□ 1.25
SNX19-213ENST00000534726 ERCC6Q03468 1493 aa22.83■■□□□ 1.25
SNX19-213ENST00000534726 WDR62O43379 1518 aa22.82■■□□□ 1.24
SNX19-213ENST00000534726 IGF1RP08069 1367 aa22.78■■□□□ 1.24
SNX19-213ENST00000534726 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
SNX19-213ENST00000534726 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
SNX19-213ENST00000534726 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
SNX19-213ENST00000534726 RAPGEF2Q9Y4G8 1499 aa22.71■■□□□ 1.23
SNX19-213ENST00000534726 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
SNX19-213ENST00000534726 TARBP1Q13395 1621 aaKnown RBP22.7■■□□□ 1.22
SNX19-213ENST00000534726 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
SNX19-213ENST00000534726 EHMT2Q96KQ7 1210 aa22.68■■□□□ 1.22
SNX19-213ENST00000534726 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
SNX19-213ENST00000534726 CUL7Q14999 1698 aa22.66■■□□□ 1.22
SNX19-213ENST00000534726 ABCA5Q8WWZ7 1642 aa22.66■■□□□ 1.22
SNX19-213ENST00000534726 CEP162Q5TB80 1403 aa22.66■■□□□ 1.22
SNX19-213ENST00000534726 GAPVD1Q14C86 1478 aa22.65■■□□□ 1.22
SNX19-213ENST00000534726 TDRD9Q8NDG6 1382 aaKnown RBP22.59■■□□□ 1.21
SNX19-213ENST00000534726 CLIP1P30622 1438 aa22.52■■□□□ 1.2
SNX19-213ENST00000534726 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
SNX19-213ENST00000534726 FHAD1B1AJZ9 1412 aa22.45■■□□□ 1.19
SNX19-213ENST00000534726 PBRM1Q86U86 1689 aa22.45■■□□□ 1.18
SNX19-213ENST00000534726 AQRO60306 1485 aaKnown RBP eCLIP22.44■■□□□ 1.18
SNX19-213ENST00000534726 ZNF608Q9ULD9 1512 aaPredicted RBP22.39■■□□□ 1.17
SNX19-213ENST00000534726 EIF4G3O43432 1585 aaKnown RBP22.37■■□□□ 1.17
SNX19-213ENST00000534726 VPS8Q8N3P4 1428 aa22.36■■□□□ 1.17
SNX19-213ENST00000534726 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
SNX19-213ENST00000534726 ADAMTS12P58397 1594 aa22.36■■□□□ 1.17
SNX19-213ENST00000534726 CTTNBP2Q8WZ74 1663 aa22.32■■□□□ 1.16
SNX19-213ENST00000534726 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
SNX19-213ENST00000534726 ARHGAP35Q9NRY4 1499 aa22.27■■□□□ 1.16
SNX19-213ENST00000534726 TRIM26Q12899 539 aaPredicted RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms