RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 NISCHQ9Y2I1 1504 aa35.89■■■■□ 3.34
VCPKMT-201ENST00000395859 ABCC9O60706 1549 aa33.35■■■□□ 2.93
VCPKMT-201ENST00000395859 CCDC180Q9P1Z9 1646 aa32.58■■■□□ 2.81
VCPKMT-201ENST00000395859 DNAJC5BQ9UF47 199 aa32.19■■■□□ 2.74
VCPKMT-201ENST00000395859 RB1CC1Q8TDY2 1594 aa31.38■■■□□ 2.61
VCPKMT-201ENST00000395859 NACADO15069 1562 aa31■■■□□ 2.55
VCPKMT-201ENST00000395859 PABPN1Q86U42 306 aaKnown RBP eCLIP30.89■■■□□ 2.54
VCPKMT-201ENST00000395859 UNC13AQ9UPW8 1703 aa30.73■■■□□ 2.51
VCPKMT-201ENST00000395859 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
VCPKMT-201ENST00000395859 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
VCPKMT-201ENST00000395859 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
VCPKMT-201ENST00000395859 DNAJC5Q9H3Z4 198 aa30.16■■■□□ 2.42
VCPKMT-201ENST00000395859 CECR2Q9BXF3 1484 aa30.16■■■□□ 2.42
VCPKMT-201ENST00000395859 CC2D2AQ9P2K1 1620 aa30.13■■■□□ 2.41
VCPKMT-201ENST00000395859 SHROOM4Q9ULL8 1493 aa30.1■■■□□ 2.41
VCPKMT-201ENST00000395859 EIF4G1Q04637 1599 aaKnown RBP29.87■■■□□ 2.37
VCPKMT-201ENST00000395859 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
VCPKMT-201ENST00000395859 ZCCHC6Q5VYS8 1495 aaKnown RBP29.58■■■□□ 2.33
VCPKMT-201ENST00000395859 SCRIBQ14160 1630 aa29.54■■■□□ 2.32
VCPKMT-201ENST00000395859 CUX2O14529 1486 aa29.17■■■□□ 2.26
VCPKMT-201ENST00000395859 ERCC6Q03468 1493 aa28.78■■■□□ 2.2
VCPKMT-201ENST00000395859 NCAPD3P42695 1498 aa28.68■■■□□ 2.18
VCPKMT-201ENST00000395859 ATAD2BQ9ULI0 1458 aa28.45■■■□□ 2.14
VCPKMT-201ENST00000395859 NESP48681 1621 aa28.44■■■□□ 2.14
VCPKMT-201ENST00000395859 THOC2Q8NI27 1593 aaKnown RBP28.38■■■□□ 2.13
VCPKMT-201ENST00000395859 HMGXB3Q12766 1538 aa28.36■■■□□ 2.13
VCPKMT-201ENST00000395859 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
VCPKMT-201ENST00000395859 SMARCA2P51531 1590 aa28.26■■■□□ 2.11
VCPKMT-201ENST00000395859 SMARCA4P51532 1647 aa28.16■■■□□ 2.1
VCPKMT-201ENST00000395859 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
VCPKMT-201ENST00000395859 BAZ1BQ9UIG0 1483 aaKnown RBP28.03■■■□□ 2.08
VCPKMT-201ENST00000395859 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
VCPKMT-201ENST00000395859 PEG3Q9GZU2 1588 aa27.99■■■□□ 2.07
VCPKMT-201ENST00000395859 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
VCPKMT-201ENST00000395859 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
VCPKMT-201ENST00000395859 WDR62O43379 1518 aa27.79■■■□□ 2.04
VCPKMT-201ENST00000395859 MRC2Q9UBG0 1479 aa27.77■■■□□ 2.04
VCPKMT-201ENST00000395859 CADPSQ9ULU8 1353 aa27.72■■■□□ 2.03
VCPKMT-201ENST00000395859 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
VCPKMT-201ENST00000395859 OSCARQ8IYS5 282 aa27.61■■■□□ 2.01
VCPKMT-201ENST00000395859 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
VCPKMT-201ENST00000395859 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
VCPKMT-201ENST00000395859 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
VCPKMT-201ENST00000395859 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
VCPKMT-201ENST00000395859 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
VCPKMT-201ENST00000395859 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
VCPKMT-201ENST00000395859 CFTRP13569 1480 aa27.25■■□□□ 1.95
VCPKMT-201ENST00000395859 ARHGEF11O15085 1522 aa27.23■■□□□ 1.95
VCPKMT-201ENST00000395859 WIZO95785 1651 aa27.22■■□□□ 1.95
VCPKMT-201ENST00000395859 ZNF608Q9ULD9 1512 aaPredicted RBP27.05■■□□□ 1.92
VCPKMT-201ENST00000395859 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
VCPKMT-201ENST00000395859 IFT140Q96RY7 1462 aa26.97■■□□□ 1.91
VCPKMT-201ENST00000395859 ARAP1Q96P48 1450 aa26.93■■□□□ 1.9
VCPKMT-201ENST00000395859 TRHP20396 242 aaPredicted RBP26.88■■□□□ 1.89
VCPKMT-201ENST00000395859 PRDM2Q13029 1718 aa26.84■■□□□ 1.89
VCPKMT-201ENST00000395859 TOP2AP11388 1531 aaKnown RBP26.84■■□□□ 1.89
VCPKMT-201ENST00000395859 EIF4G3O43432 1585 aaKnown RBP26.82■■□□□ 1.88
VCPKMT-201ENST00000395859 RSF1Q96T23 1441 aaPredicted RBP26.79■■□□□ 1.88
VCPKMT-201ENST00000395859 TOPBP1Q92547 1522 aa26.78■■□□□ 1.88
VCPKMT-201ENST00000395859 CHD1O14646 1710 aa26.76■■□□□ 1.87
VCPKMT-201ENST00000395859 AEBP2Q6ZN18 517 aaPredicted RBP26.7■■□□□ 1.86
VCPKMT-201ENST00000395859 AQRO60306 1485 aaKnown RBP eCLIP26.66■■□□□ 1.861e-6■■■■□ 26.1
VCPKMT-201ENST00000395859 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
VCPKMT-201ENST00000395859 ABCC8Q09428 1581 aa26.63■■□□□ 1.85
VCPKMT-201ENST00000395859 DNMBPQ6XZF7 1577 aa26.59■■□□□ 1.85
VCPKMT-201ENST00000395859 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
VCPKMT-201ENST00000395859 CLASP1Q7Z460 1538 aa26.53■■□□□ 1.84
VCPKMT-201ENST00000395859 FBLN2P98095 1184 aa26.49■■□□□ 1.83
VCPKMT-201ENST00000395859 POLA1P09884 1462 aaPredicted RBP26.46■■□□□ 1.83
VCPKMT-201ENST00000395859 RAD54L2Q9Y4B4 1467 aa26.36■■□□□ 1.81
VCPKMT-201ENST00000395859 SNAPC4Q5SXM2 1469 aa26.34■■□□□ 1.81
VCPKMT-201ENST00000395859 TDRD9Q8NDG6 1382 aaKnown RBP26.33■■□□□ 1.81
VCPKMT-201ENST00000395859 SYNJ1O43426 1573 aa26.33■■□□□ 1.8
VCPKMT-201ENST00000395859 WDR97A6NE52 1622 aa26.3■■□□□ 1.8
VCPKMT-201ENST00000395859 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
VCPKMT-201ENST00000395859 SOGA1O94964 1423 aa26.26■■□□□ 1.79
VCPKMT-201ENST00000395859 GAPVD1Q14C86 1478 aa26.23■■□□□ 1.79
VCPKMT-201ENST00000395859 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
VCPKMT-201ENST00000395859 SYNJ2O15056 1496 aa26.19■■□□□ 1.78
VCPKMT-201ENST00000395859 GRIN2BQ13224 1484 aa26.15■■□□□ 1.78
VCPKMT-201ENST00000395859 FGD5Q6ZNL6 1462 aa26.13■■□□□ 1.77
VCPKMT-201ENST00000395859 ERCC6L2Q5T890 1561 aa26.03■■□□□ 1.76
VCPKMT-201ENST00000395859 CUX1P39880 1505 aa26.01■■□□□ 1.75
VCPKMT-201ENST00000395859 PBRM1Q86U86 1689 aa25.97■■□□□ 1.75
VCPKMT-201ENST00000395859 KIF13AQ9H1H9 1805 aa25.94■■□□□ 1.74
VCPKMT-201ENST00000395859 ABCA5Q8WWZ7 1642 aa25.88■■□□□ 1.73
VCPKMT-201ENST00000395859 CEP170Q5SW79 1584 aa25.87■■□□□ 1.73
VCPKMT-201ENST00000395859 NUP160Q12769 1436 aa25.85■■□□□ 1.73
VCPKMT-201ENST00000395859 ABCA10Q8WWZ4 1543 aa25.84■■□□□ 1.73
VCPKMT-201ENST00000395859 SHROOM2Q13796 1616 aa25.84■■□□□ 1.73
VCPKMT-201ENST00000395859 GRIN2AQ12879 1464 aa25.84■■□□□ 1.73
VCPKMT-201ENST00000395859 ILDR1Q86SU0 546 aaPredicted RBP25.81■■□□□ 1.72
VCPKMT-201ENST00000395859 KDM4FA0A1W2PPD8 638 aa25.75■■□□□ 1.71
VCPKMT-201ENST00000395859 ADAMTS12P58397 1594 aa25.72■■□□□ 1.71
VCPKMT-201ENST00000395859 ABCC10Q5T3U5 1492 aa25.69■■□□□ 1.7
VCPKMT-201ENST00000395859 MAPKBP1O60336 1514 aa25.6■■□□□ 1.69
VCPKMT-201ENST00000395859 FAM69CQ0P6D2 419 aa25.6■■□□□ 1.69
VCPKMT-201ENST00000395859 FHAD1B1AJZ9 1412 aa25.59■■□□□ 1.69
VCPKMT-201ENST00000395859 DIP2BQ9P265 1576 aa25.59■■□□□ 1.69
VCPKMT-201ENST00000395859 PRG4Q92954 1404 aaPredicted RBP25.57■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms