Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.88■□□□□ 0.13
RFX1P22670 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.88■□□□□ 0.13
RFX1P22670 ECM1P1-201ENST00000604092 1279 ntBASIC15.88■□□□□ 0.13
RFX1P22670 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
RFX1P22670 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RFX1P22670 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RFX1P22670 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RFX1P22670 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
RFX1P22670 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
RFX1P22670 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
RFX1P22670 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
RFX1P22670 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 AL928921.2-201ENST00000641325 2442 ntBASIC15.87■□□□□ 0.13
RFX1P22670 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFX1P22670 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.87■□□□□ 0.13
RFX1P22670 FAM8A4P-201ENST00000435433 1213 ntBASIC15.87■□□□□ 0.13
RFX1P22670 AC253536.4-201ENST00000440539 267 ntBASIC15.87■□□□□ 0.13
RFX1P22670 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.87■□□□□ 0.13
RFX1P22670 RPS2P36-201ENST00000456516 831 ntBASIC15.87■□□□□ 0.13
RFX1P22670 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.87■□□□□ 0.13
RFX1P22670 RN7SL720P-201ENST00000488178 304 ntBASIC15.87■□□□□ 0.13
RFX1P22670 AC126915.1-201ENST00000522847 1038 ntBASIC15.87■□□□□ 0.13
RFX1P22670 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
RFX1P22670 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.87■□□□□ 0.13
RFX1P22670 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.87■□□□□ 0.13
RFX1P22670 AC008825.2-201ENST00000603374 718 ntBASIC15.87■□□□□ 0.13
RFX1P22670 AC091812.3-201ENST00000621362 345 ntBASIC15.87■□□□□ 0.13
RFX1P22670 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
RFX1P22670 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
RFX1P22670 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.87■□□□□ 0.13
RFX1P22670 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
RFX1P22670 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.87■□□□□ 0.13
RFX1P22670 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX1P22670 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX1P22670 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX1P22670 AC009093.10-201ENST00000641956 1442 ntBASIC15.86■□□□□ 0.13
RFX1P22670 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RFX1P22670 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 KRT8P19-201ENST00000551916 1455 ntBASIC15.86■□□□□ 0.13
RFX1P22670 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX1P22670 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.86■□□□□ 0.13
RFX1P22670 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RFX1P22670 HLA-DQB2-229ENST00000411527 1059 ntBASIC15.86■□□□□ 0.13
RFX1P22670 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.86■□□□□ 0.13
RFX1P22670 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms