RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 NISCHQ9Y2I1 1504 aa35.91■■■■□ 3.34
HLA-DQB2-229ENST00000411527 ABCC9O60706 1549 aa32.49■■■□□ 2.79
HLA-DQB2-229ENST00000411527 CCDC180Q9P1Z9 1646 aa32.28■■■□□ 2.76
HLA-DQB2-229ENST00000411527 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
HLA-DQB2-229ENST00000411527 DNAJC5BQ9UF47 199 aa30.64■■■□□ 2.5
HLA-DQB2-229ENST00000411527 NACADO15069 1562 aa30.57■■■□□ 2.48
HLA-DQB2-229ENST00000411527 DCAF8L2P0C7V8 631 aa30.49■■■□□ 2.47
HLA-DQB2-229ENST00000411527 PABPN1Q86U42 306 aaKnown RBP eCLIP30.25■■■□□ 2.43
HLA-DQB2-229ENST00000411527 UNC13AQ9UPW8 1703 aa30.16■■■□□ 2.42
HLA-DQB2-229ENST00000411527 MYO15BQ96JP2 1530 aa30.06■■■□□ 2.4
HLA-DQB2-229ENST00000411527 BICRAQ9NZM4 1560 aa29.93■■■□□ 2.38
HLA-DQB2-229ENST00000411527 ZCCHC6Q5VYS8 1495 aaKnown RBP29.7■■■□□ 2.35
HLA-DQB2-229ENST00000411527 DCAF1Q9Y4B6 1507 aa29.62■■■□□ 2.33
HLA-DQB2-229ENST00000411527 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
HLA-DQB2-229ENST00000411527 SCRIBQ14160 1630 aa29.43■■■□□ 2.3
HLA-DQB2-229ENST00000411527 CC2D2AQ9P2K1 1620 aa29.33■■■□□ 2.29
HLA-DQB2-229ENST00000411527 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
HLA-DQB2-229ENST00000411527 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
HLA-DQB2-229ENST00000411527 DNAJC5Q9H3Z4 198 aa28.25■■■□□ 2.11
HLA-DQB2-229ENST00000411527 NCAPD3P42695 1498 aa28.22■■■□□ 2.11
HLA-DQB2-229ENST00000411527 ATAD2BQ9ULI0 1458 aa28.12■■■□□ 2.09
HLA-DQB2-229ENST00000411527 ERCC6Q03468 1493 aa28.06■■■□□ 2.08
HLA-DQB2-229ENST00000411527 SMARCA4P51532 1647 aa28.05■■■□□ 2.08
HLA-DQB2-229ENST00000411527 CUX2O14529 1486 aa28.03■■■□□ 2.08
HLA-DQB2-229ENST00000411527 SMARCA2P51531 1590 aa28.03■■■□□ 2.08
HLA-DQB2-229ENST00000411527 HMGXB3Q12766 1538 aa27.98■■■□□ 2.07
HLA-DQB2-229ENST00000411527 BAZ1AQ9NRL2 1556 aaPredicted RBP27.88■■■□□ 2.05
HLA-DQB2-229ENST00000411527 NESP48681 1621 aa27.86■■■□□ 2.05
HLA-DQB2-229ENST00000411527 BAZ1BQ9UIG0 1483 aaKnown RBP27.84■■■□□ 2.05
HLA-DQB2-229ENST00000411527 PEG3Q9GZU2 1588 aa27.75■■■□□ 2.03
HLA-DQB2-229ENST00000411527 MROH2BQ7Z745 1585 aa27.68■■■□□ 2.02
HLA-DQB2-229ENST00000411527 LAMC3Q9Y6N6 1575 aa27.61■■■□□ 2.01
HLA-DQB2-229ENST00000411527 THOC2Q8NI27 1593 aaKnown RBP27.57■■■□□ 2
HLA-DQB2-229ENST00000411527 KIF21AQ7Z4S6 1674 aa27.49■■□□□ 1.99
HLA-DQB2-229ENST00000411527 PDS5BQ9NTI5 1447 aa27.47■■□□□ 1.99
HLA-DQB2-229ENST00000411527 CADPSQ9ULU8 1353 aa27.37■■□□□ 1.97
HLA-DQB2-229ENST00000411527 WIZO95785 1651 aa27.35■■□□□ 1.97
HLA-DQB2-229ENST00000411527 MRC2Q9UBG0 1479 aa27.24■■□□□ 1.95
HLA-DQB2-229ENST00000411527 WDR62O43379 1518 aa27.16■■□□□ 1.94
HLA-DQB2-229ENST00000411527 CEP164Q9UPV0 1460 aa27.1■■□□□ 1.93
HLA-DQB2-229ENST00000411527 FANCD2Q9BXW9 1451 aa27.06■■□□□ 1.92
HLA-DQB2-229ENST00000411527 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
HLA-DQB2-229ENST00000411527 CFTRP13569 1480 aa27■■□□□ 1.91
HLA-DQB2-229ENST00000411527 TRIM41Q8WV44 630 aa26.98■■□□□ 1.91
HLA-DQB2-229ENST00000411527 TOP2AP11388 1531 aaKnown RBP26.96■■□□□ 1.91
HLA-DQB2-229ENST00000411527 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
HLA-DQB2-229ENST00000411527 OSCARQ8IYS5 282 aa26.78■■□□□ 1.88
HLA-DQB2-229ENST00000411527 PRDM2Q13029 1718 aa26.74■■□□□ 1.87
HLA-DQB2-229ENST00000411527 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
HLA-DQB2-229ENST00000411527 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
HLA-DQB2-229ENST00000411527 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
HLA-DQB2-229ENST00000411527 TOPBP1Q92547 1522 aa26.53■■□□□ 1.84
HLA-DQB2-229ENST00000411527 ABCC8Q09428 1581 aa26.46■■□□□ 1.83
HLA-DQB2-229ENST00000411527 RIMBP3CA6NJZ7 1639 aa26.42■■□□□ 1.82
HLA-DQB2-229ENST00000411527 RIMBP3BA6NNM3 1639 aa26.42■■□□□ 1.82
HLA-DQB2-229ENST00000411527 RIMBP3Q9UFD9 1639 aa26.42■■□□□ 1.82
HLA-DQB2-229ENST00000411527 DNMBPQ6XZF7 1577 aa26.41■■□□□ 1.82
HLA-DQB2-229ENST00000411527 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
HLA-DQB2-229ENST00000411527 ARHGEF11O15085 1522 aa26.31■■□□□ 1.8
HLA-DQB2-229ENST00000411527 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
HLA-DQB2-229ENST00000411527 TARBP1Q13395 1621 aaKnown RBP26.3■■□□□ 1.8
HLA-DQB2-229ENST00000411527 CHD1O14646 1710 aa26.24■■□□□ 1.79
HLA-DQB2-229ENST00000411527 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
HLA-DQB2-229ENST00000411527 FBLN2P98095 1184 aa26.21■■□□□ 1.79
HLA-DQB2-229ENST00000411527 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
HLA-DQB2-229ENST00000411527 RAD54L2Q9Y4B4 1467 aa26.17■■□□□ 1.78
HLA-DQB2-229ENST00000411527 SOGA1O94964 1423 aa26.14■■□□□ 1.78
HLA-DQB2-229ENST00000411527 TDRD9Q8NDG6 1382 aaKnown RBP26.12■■□□□ 1.77
HLA-DQB2-229ENST00000411527 FGD5Q6ZNL6 1462 aa26.06■■□□□ 1.76
HLA-DQB2-229ENST00000411527 ARAP1Q96P48 1450 aa26.04■■□□□ 1.76
HLA-DQB2-229ENST00000411527 CUX1P39880 1505 aa26■■□□□ 1.75
HLA-DQB2-229ENST00000411527 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
HLA-DQB2-229ENST00000411527 WDR97A6NE52 1622 aa25.99■■□□□ 1.75
HLA-DQB2-229ENST00000411527 CHMP7Q8WUX9 453 aaPredicted RBP25.97■■□□□ 1.75
HLA-DQB2-229ENST00000411527 TRHP20396 242 aaPredicted RBP25.96■■□□□ 1.75
HLA-DQB2-229ENST00000411527 GRIN2BQ13224 1484 aa25.91■■□□□ 1.74
HLA-DQB2-229ENST00000411527 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
HLA-DQB2-229ENST00000411527 CLASP1Q7Z460 1538 aa25.9■■□□□ 1.74
HLA-DQB2-229ENST00000411527 SYNJ1O43426 1573 aa25.88■■□□□ 1.73
HLA-DQB2-229ENST00000411527 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
HLA-DQB2-229ENST00000411527 PBRM1Q86U86 1689 aa25.81■■□□□ 1.72
HLA-DQB2-229ENST00000411527 GAPVD1Q14C86 1478 aa25.81■■□□□ 1.72
HLA-DQB2-229ENST00000411527 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
HLA-DQB2-229ENST00000411527 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
HLA-DQB2-229ENST00000411527 ABCA5Q8WWZ7 1642 aa25.71■■□□□ 1.71
HLA-DQB2-229ENST00000411527 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
HLA-DQB2-229ENST00000411527 GRIN2AQ12879 1464 aa25.58■■□□□ 1.69
HLA-DQB2-229ENST00000411527 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
HLA-DQB2-229ENST00000411527 BIVM-ERCC5R4GMW8 1640 aa25.54■■□□□ 1.68
HLA-DQB2-229ENST00000411527 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
HLA-DQB2-229ENST00000411527 ERCC6L2Q5T890 1561 aa25.51■■□□□ 1.67
HLA-DQB2-229ENST00000411527 CEP170Q5SW79 1584 aa25.5■■□□□ 1.67
HLA-DQB2-229ENST00000411527 NUP160Q12769 1436 aa25.48■■□□□ 1.67
HLA-DQB2-229ENST00000411527 FHAD1B1AJZ9 1412 aa25.46■■□□□ 1.67
HLA-DQB2-229ENST00000411527 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
HLA-DQB2-229ENST00000411527 SHROOM2Q13796 1616 aa25.4■■□□□ 1.66
HLA-DQB2-229ENST00000411527 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.65
HLA-DQB2-229ENST00000411527 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
HLA-DQB2-229ENST00000411527 JPH4Q96JJ6 628 aa25.28■■□□□ 1.64
HLA-DQB2-229ENST00000411527 KIF13AQ9H1H9 1805 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms