RNA–Protein interactions for RNA: ENST00000440539.1

AC253536.4-201, humanhuman

BASIC

Gene AC253536.4, Length 267 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC253536.4-201ENST00000440539 NISCHQ9Y2I1 1504 aa35.83■■■■□ 3.33
AC253536.4-201ENST00000440539 ABCC9O60706 1549 aa33.23■■■□□ 2.91
AC253536.4-201ENST00000440539 CCDC180Q9P1Z9 1646 aa32.53■■■□□ 2.8
AC253536.4-201ENST00000440539 DNAJC5BQ9UF47 199 aa31.93■■■□□ 2.7
AC253536.4-201ENST00000440539 RB1CC1Q8TDY2 1594 aa31.34■■■□□ 2.61
AC253536.4-201ENST00000440539 NACADO15069 1562 aa30.96■■■□□ 2.55
AC253536.4-201ENST00000440539 PABPN1Q86U42 306 aaKnown RBP eCLIP30.8■■■□□ 2.52
AC253536.4-201ENST00000440539 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
AC253536.4-201ENST00000440539 DCAF8L2P0C7V8 631 aa30.5■■■□□ 2.47
AC253536.4-201ENST00000440539 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.47
AC253536.4-201ENST00000440539 MYO15BQ96JP2 1530 aa30.32■■■□□ 2.44
AC253536.4-201ENST00000440539 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
AC253536.4-201ENST00000440539 SHROOM4Q9ULL8 1493 aa30.04■■■□□ 2.4
AC253536.4-201ENST00000440539 CC2D2AQ9P2K1 1620 aa30.02■■■□□ 2.4
AC253536.4-201ENST00000440539 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
AC253536.4-201ENST00000440539 EIF4G1Q04637 1599 aaKnown RBP29.77■■■□□ 2.36
AC253536.4-201ENST00000440539 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
AC253536.4-201ENST00000440539 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
AC253536.4-201ENST00000440539 SCRIBQ14160 1630 aa29.49■■■□□ 2.31
AC253536.4-201ENST00000440539 CUX2O14529 1486 aa29.06■■■□□ 2.24
AC253536.4-201ENST00000440539 ERCC6Q03468 1493 aa28.76■■■□□ 2.19
AC253536.4-201ENST00000440539 NCAPD3P42695 1498 aa28.6■■■□□ 2.17
AC253536.4-201ENST00000440539 ATAD2BQ9ULI0 1458 aa28.36■■■□□ 2.13
AC253536.4-201ENST00000440539 NESP48681 1621 aa28.32■■■□□ 2.12
AC253536.4-201ENST00000440539 HMGXB3Q12766 1538 aa28.29■■■□□ 2.12
AC253536.4-201ENST00000440539 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
AC253536.4-201ENST00000440539 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
AC253536.4-201ENST00000440539 TRIM41Q8WV44 630 aa28.21■■■□□ 2.11
AC253536.4-201ENST00000440539 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
AC253536.4-201ENST00000440539 LAMC3Q9Y6N6 1575 aa28.07■■■□□ 2.08
AC253536.4-201ENST00000440539 BAZ1BQ9UIG0 1483 aaKnown RBP28.02■■■□□ 2.08
AC253536.4-201ENST00000440539 KIF21AQ7Z4S6 1674 aa27.94■■■□□ 2.06
AC253536.4-201ENST00000440539 PDS5BQ9NTI5 1447 aa27.92■■■□□ 2.06
AC253536.4-201ENST00000440539 PEG3Q9GZU2 1588 aa27.9■■■□□ 2.06
AC253536.4-201ENST00000440539 BAZ1AQ9NRL2 1556 aaPredicted RBP27.87■■■□□ 2.05
AC253536.4-201ENST00000440539 MRC2Q9UBG0 1479 aa27.7■■■□□ 2.03
AC253536.4-201ENST00000440539 WDR62O43379 1518 aa27.68■■■□□ 2.02
AC253536.4-201ENST00000440539 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
AC253536.4-201ENST00000440539 OSCARQ8IYS5 282 aa27.59■■■□□ 2.01
AC253536.4-201ENST00000440539 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
AC253536.4-201ENST00000440539 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
AC253536.4-201ENST00000440539 FANCD2Q9BXW9 1451 aa27.32■■□□□ 1.96
AC253536.4-201ENST00000440539 RIMBP3CA6NJZ7 1639 aa27.28■■□□□ 1.96
AC253536.4-201ENST00000440539 RIMBP3BA6NNM3 1639 aa27.28■■□□□ 1.96
AC253536.4-201ENST00000440539 RIMBP3Q9UFD9 1639 aa27.28■■□□□ 1.96
AC253536.4-201ENST00000440539 CFTRP13569 1480 aa27.19■■□□□ 1.94
AC253536.4-201ENST00000440539 WIZO95785 1651 aa27.18■■□□□ 1.94
AC253536.4-201ENST00000440539 URB2Q14146 1524 aaKnown RBP27.15■■□□□ 1.94
AC253536.4-201ENST00000440539 ARHGEF11O15085 1522 aa27.11■■□□□ 1.93
AC253536.4-201ENST00000440539 CYB5RLQ6IPT4 315 aa26.95■■□□□ 1.9
AC253536.4-201ENST00000440539 IFT140Q96RY7 1462 aa26.93■■□□□ 1.9
AC253536.4-201ENST00000440539 ZNF608Q9ULD9 1512 aaPredicted RBP26.92■■□□□ 1.9
AC253536.4-201ENST00000440539 TRHP20396 242 aaPredicted RBP26.89■■□□□ 1.9
AC253536.4-201ENST00000440539 PRDM2Q13029 1718 aa26.83■■□□□ 1.89
AC253536.4-201ENST00000440539 TOP2AP11388 1531 aaKnown RBP26.81■■□□□ 1.88
AC253536.4-201ENST00000440539 ARAP1Q96P48 1450 aa26.79■■□□□ 1.88
AC253536.4-201ENST00000440539 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
AC253536.4-201ENST00000440539 TOPBP1Q92547 1522 aa26.72■■□□□ 1.87
AC253536.4-201ENST00000440539 AEBP2Q6ZN18 517 aaPredicted RBP26.72■■□□□ 1.87
AC253536.4-201ENST00000440539 RSF1Q96T23 1441 aaPredicted RBP26.72■■□□□ 1.87
AC253536.4-201ENST00000440539 CHD1O14646 1710 aa26.69■■□□□ 1.86
AC253536.4-201ENST00000440539 ABCC8Q09428 1581 aa26.67■■□□□ 1.86
AC253536.4-201ENST00000440539 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.85
AC253536.4-201ENST00000440539 TARBP1Q13395 1621 aaKnown RBP26.56■■□□□ 1.84
AC253536.4-201ENST00000440539 DNMBPQ6XZF7 1577 aa26.55■■□□□ 1.84
AC253536.4-201ENST00000440539 FBLN2P98095 1184 aa26.53■■□□□ 1.84
AC253536.4-201ENST00000440539 CCDC88BA6NC98 1476 aa26.51■■□□□ 1.83
AC253536.4-201ENST00000440539 CLASP1Q7Z460 1538 aa26.41■■□□□ 1.82
AC253536.4-201ENST00000440539 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
AC253536.4-201ENST00000440539 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
AC253536.4-201ENST00000440539 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
AC253536.4-201ENST00000440539 RAD54L2Q9Y4B4 1467 aa26.29■■□□□ 1.8
AC253536.4-201ENST00000440539 WDR97A6NE52 1622 aa26.28■■□□□ 1.8
AC253536.4-201ENST00000440539 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
AC253536.4-201ENST00000440539 SOGA1O94964 1423 aa26.26■■□□□ 1.79
AC253536.4-201ENST00000440539 CHMP7Q8WUX9 453 aaPredicted RBP26.26■■□□□ 1.79
AC253536.4-201ENST00000440539 MAGI1Q96QZ7 1491 aaPredicted RBP26.23■■□□□ 1.79
AC253536.4-201ENST00000440539 GAPVD1Q14C86 1478 aa26.17■■□□□ 1.78
AC253536.4-201ENST00000440539 SYNJ2O15056 1496 aa26.15■■□□□ 1.78
AC253536.4-201ENST00000440539 GRIN2BQ13224 1484 aa26.13■■□□□ 1.77
AC253536.4-201ENST00000440539 FGD5Q6ZNL6 1462 aa26.1■■□□□ 1.77
AC253536.4-201ENST00000440539 PBRM1Q86U86 1689 aa25.95■■□□□ 1.74
AC253536.4-201ENST00000440539 CUX1P39880 1505 aa25.94■■□□□ 1.74
AC253536.4-201ENST00000440539 ERCC6L2Q5T890 1561 aa25.88■■□□□ 1.73
AC253536.4-201ENST00000440539 KIF13AQ9H1H9 1805 aa25.84■■□□□ 1.73
AC253536.4-201ENST00000440539 ABCA5Q8WWZ7 1642 aa25.81■■□□□ 1.72
AC253536.4-201ENST00000440539 CEP170Q5SW79 1584 aa25.8■■□□□ 1.72
AC253536.4-201ENST00000440539 GRIN2AQ12879 1464 aa25.79■■□□□ 1.72
AC253536.4-201ENST00000440539 ABCA10Q8WWZ4 1543 aa25.79■■□□□ 1.72
AC253536.4-201ENST00000440539 NUP160Q12769 1436 aa25.77■■□□□ 1.72
AC253536.4-201ENST00000440539 SHROOM2Q13796 1616 aa25.74■■□□□ 1.71
AC253536.4-201ENST00000440539 ILDR1Q86SU0 546 aaPredicted RBP25.66■■□□□ 1.7
AC253536.4-201ENST00000440539 ADAMTS12P58397 1594 aa25.65■■□□□ 1.7
AC253536.4-201ENST00000440539 ABCC10Q5T3U5 1492 aa25.62■■□□□ 1.69
AC253536.4-201ENST00000440539 KDM4FA0A1W2PPD8 638 aa25.62■■□□□ 1.69
AC253536.4-201ENST00000440539 FAM69CQ0P6D2 419 aa25.59■■□□□ 1.69
AC253536.4-201ENST00000440539 FHAD1B1AJZ9 1412 aa25.58■■□□□ 1.69
AC253536.4-201ENST00000440539 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
AC253536.4-201ENST00000440539 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
AC253536.4-201ENST00000440539 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms