RNA–Protein interactions for RNA: ENST00000535237.2

GOPC-203, Transcript of golgi associated PDZ and coiled-coil motif containing, humanhuman

TSL 1 (best) BASIC

Gene GOPC, Length 4,460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GOPC-203ENST00000535237 DCAF8L2P0C7V8 631 aa25.26■■□□□ 1.63
GOPC-203ENST00000535237 NISCHQ9Y2I1 1504 aa24.75■■□□□ 1.55
GOPC-203ENST00000535237 SUPT5HO00267 1087 aaKnown RBP24.75■■□□□ 1.55
GOPC-203ENST00000535237 SHROOM4Q9ULL8 1493 aa24.15■■□□□ 1.46
GOPC-203ENST00000535237 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
GOPC-203ENST00000535237 EHMT2Q96KQ7 1210 aa23.82■■□□□ 1.4
GOPC-203ENST00000535237 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
GOPC-203ENST00000535237 FAM9AQ8IZU1 332 aaPredicted RBP23.29■■□□□ 1.32
GOPC-203ENST00000535237 CENPBP07199 599 aaPredicted RBP23.29■■□□□ 1.32
GOPC-203ENST00000535237 ZEB1P37275 1124 aaPredicted RBP23.24■■□□□ 1.31
GOPC-203ENST00000535237 HRCP23327 699 aa23.16■■□□□ 1.3
GOPC-203ENST00000535237 TTBK1Q5TCY1 1321 aaPredicted RBP23.13■■□□□ 1.29
GOPC-203ENST00000535237 MYT1Q01538 1121 aa23.1■■□□□ 1.29
GOPC-203ENST00000535237 CCER1Q8TC90 406 aaPredicted RBP23.02■■□□□ 1.28
GOPC-203ENST00000535237 APLP2Q06481 763 aa22.95■■□□□ 1.26
GOPC-203ENST00000535237 YTHDC1Q96MU7 727 aaKnown RBP22.82■■□□□ 1.24
GOPC-203ENST00000535237 PPARGC1BQ86YN6 1023 aaKnown RBP22.81■■□□□ 1.24
GOPC-203ENST00000535237 TRIM41Q8WV44 630 aa22.76■■□□□ 1.23
GOPC-203ENST00000535237 TRIM26Q12899 539 aaPredicted RBP22.74■■□□□ 1.23
GOPC-203ENST00000535237 ERICH6Q7L0X2 663 aa22.72■■□□□ 1.23
GOPC-203ENST00000535237 LOC105371045A0A1W2PR82 267 aa22.51■■□□□ 1.19
GOPC-203ENST00000535237 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
GOPC-203ENST00000535237 RANGAP1P46060 587 aaPredicted RBP22.45■■□□□ 1.18
GOPC-203ENST00000535237 NEFLP07196 543 aa22.39■■□□□ 1.17
GOPC-203ENST00000535237 UBTFP17480 764 aaKnown RBP22.32■■□□□ 1.16
GOPC-203ENST00000535237 ABCC9O60706 1549 aa22.27■■□□□ 1.16
GOPC-203ENST00000535237 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
GOPC-203ENST00000535237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
GOPC-203ENST00000535237 GTF3C3Q9Y5Q9 886 aa22.07■■□□□ 1.12
GOPC-203ENST00000535237 ATP1B4Q9UN42 357 aaPredicted RBP21.97■■□□□ 1.11
GOPC-203ENST00000535237 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
GOPC-203ENST00000535237 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
GOPC-203ENST00000535237 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
GOPC-203ENST00000535237 ITGAEP38570 1179 aa21.75■■□□□ 1.07
GOPC-203ENST00000535237 BCANQ96GW7 911 aa21.61■■□□□ 1.05
GOPC-203ENST00000535237 DAXXQ9UER7 740 aaPredicted RBP21.52■■□□□ 1.04
GOPC-203ENST00000535237 ZNF316A6NFI3 1004 aaPredicted RBP21.5■■□□□ 1.03
GOPC-203ENST00000535237 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
GOPC-203ENST00000535237 RTL5Q5HYW3 569 aaPredicted RBP21.47■■□□□ 1.03
GOPC-203ENST00000535237 CNGB1Q14028 1251 aaPredicted RBP21.46■■□□□ 1.03
GOPC-203ENST00000535237 POLR3GLQ9BT43 218 aa21.44■■□□□ 1.02
GOPC-203ENST00000535237 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
GOPC-203ENST00000535237 CDK11AQ9UQ88 783 aaPredicted RBP21.23■□□□□ 0.99
GOPC-203ENST00000535237 DCAF1Q9Y4B6 1507 aa21.16■□□□□ 0.98
GOPC-203ENST00000535237 ANP32CO43423 234 aa21.12■□□□□ 0.97
GOPC-203ENST00000535237 FAM50AQ14320 339 aaKnown RBP21.06■□□□□ 0.96
GOPC-203ENST00000535237 FKBP8Q14318 412 aa21.03■□□□□ 0.96
GOPC-203ENST00000535237 CLSPNQ9HAW4 1339 aa21.02■□□□□ 0.96
GOPC-203ENST00000535237 MIER1Q8N108 512 aa20.92■□□□□ 0.94
GOPC-203ENST00000535237 MYO15BQ96JP2 1530 aa20.86■□□□□ 0.93
GOPC-203ENST00000535237 TRIM52Q96A61 297 aa20.84■□□□□ 0.93
GOPC-203ENST00000535237 ANP32AP39687 249 aaKnown RBP20.83■□□□□ 0.93
GOPC-203ENST00000535237 FBLN2P98095 1184 aa20.82■□□□□ 0.92
GOPC-203ENST00000535237 CSRNP3Q8WYN3 585 aa20.8■□□□□ 0.92
GOPC-203ENST00000535237 EIF5BO60841 1220 aaKnown RBP20.78■□□□□ 0.92
GOPC-203ENST00000535237 MYT1LQ9UL68 1186 aa20.77■□□□□ 0.92
GOPC-203ENST00000535237 DDX10Q13206 875 aaKnown RBP20.76■□□□□ 0.91
GOPC-203ENST00000535237 NPM2Q86SE8 214 aaKnown RBP20.74■□□□□ 0.91
GOPC-203ENST00000535237 HNRNPUQ00839 825 aaKnown RBP eCLIP20.7■□□□□ 0.9
GOPC-203ENST00000535237 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
GOPC-203ENST00000535237 ZNF326Q5BKZ1 582 aaKnown RBP20.69■□□□□ 0.9
GOPC-203ENST00000535237 ANP32EQ9BTT0 268 aa20.68■□□□□ 0.9
GOPC-203ENST00000535237 NBR1Q14596 966 aa20.67■□□□□ 0.9
GOPC-203ENST00000535237 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
GOPC-203ENST00000535237 CCDC180Q9P1Z9 1646 aa20.58■□□□□ 0.88
GOPC-203ENST00000535237 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
GOPC-203ENST00000535237 IRX6P78412 446 aaPredicted RBP20.54■□□□□ 0.88
GOPC-203ENST00000535237 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.88
GOPC-203ENST00000535237 ZBTB47Q9UFB7 747 aaPredicted RBP20.5■□□□□ 0.87
GOPC-203ENST00000535237 P3H3Q8IVL6 736 aa20.46■□□□□ 0.87
GOPC-203ENST00000535237 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.86
GOPC-203ENST00000535237 HIRIP3Q9BW71 556 aaPredicted RBP20.43■□□□□ 0.86
GOPC-203ENST00000535237 TONSLQ96HA7 1378 aa20.43■□□□□ 0.86
GOPC-203ENST00000535237 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.86
GOPC-203ENST00000535237 BCL11AQ9H165 835 aa20.39■□□□□ 0.85
GOPC-203ENST00000535237 CANXP27824 592 aaKnown RBP20.37■□□□□ 0.85
GOPC-203ENST00000535237 SALL2Q9Y467 1007 aaPredicted RBP20.33■□□□□ 0.85
GOPC-203ENST00000535237 ZCCHC6Q5VYS8 1495 aaKnown RBP20.33■□□□□ 0.85
GOPC-203ENST00000535237 MRS2Q9HD23 443 aa20.3■□□□□ 0.84
GOPC-203ENST00000535237 GLIPR1L2Q4G1C9 344 aa20.28■□□□□ 0.84
GOPC-203ENST00000535237 NACADO15069 1562 aa20.25■□□□□ 0.83
GOPC-203ENST00000535237 ARID3CA6NKF2 412 aa20.23■□□□□ 0.83
GOPC-203ENST00000535237 ARXQ96QS3 562 aa20.22■□□□□ 0.83
GOPC-203ENST00000535237 TMC1Q8TDI8 760 aa20.2■□□□□ 0.82
GOPC-203ENST00000535237 RTN4Q9NQC3 1192 aaKnown RBP20.14■□□□□ 0.81
GOPC-203ENST00000535237 ANP32BQ92688 251 aaKnown RBP20.13■□□□□ 0.81
GOPC-203ENST00000535237 CEP162Q5TB80 1403 aa20.13■□□□□ 0.81
GOPC-203ENST00000535237 UPF2Q9HAU5 1272 aaKnown RBP20.12■□□□□ 0.81
GOPC-203ENST00000535237 RBM19Q9Y4C8 960 aaKnown RBP20.12■□□□□ 0.81
GOPC-203ENST00000535237 CLIP1P30622 1438 aa20.11■□□□□ 0.81
GOPC-203ENST00000535237 NPM1P06748 294 aaKnown RBP eCLIP20.11■□□□□ 0.81
GOPC-203ENST00000535237 HSP90AA1P07900 732 aaKnown RBP20.1■□□□□ 0.81
GOPC-203ENST00000535237 CHIC2Q9UKJ5 165 aa20.07■□□□□ 0.8
GOPC-203ENST00000535237 SENP3-EIF4A1A0A087X0R7 540 aa20.06■□□□□ 0.8
GOPC-203ENST00000535237 TSHZ2Q9NRE2 1034 aa20.05■□□□□ 0.8
GOPC-203ENST00000535237 ZNF777Q9ULD5 760 aaPredicted RBP20.05■□□□□ 0.8
GOPC-203ENST00000535237 EIF4G2P78344 907 aaKnown RBP eCLIP20.03■□□□□ 0.86e-6■■■■□ 25.1
GOPC-203ENST00000535237 PPP4R2Q9NY27 417 aa20.02■□□□□ 0.8
GOPC-203ENST00000535237 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
GOPC-203ENST00000535237 NEFMP07197 916 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms