RNA–Protein interactions for RNA: ENST00000306107.9

ALCAM-201, Transcript of activated leukocyte cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALCAM, Length 4,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALCAM-201ENST00000306107 DCAF8L2P0C7V8 631 aa25.97■■□□□ 1.75
ALCAM-201ENST00000306107 NISCHQ9Y2I1 1504 aa24.67■■□□□ 1.54
ALCAM-201ENST00000306107 SUPT5HO00267 1087 aaKnown RBP23.84■■□□□ 1.41
ALCAM-201ENST00000306107 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
ALCAM-201ENST00000306107 EHMT2Q96KQ7 1210 aa23.08■■□□□ 1.29
ALCAM-201ENST00000306107 FAM9AQ8IZU1 332 aaPredicted RBP22.53■■□□□ 1.2
ALCAM-201ENST00000306107 APLP2Q06481 763 aa22.44■■□□□ 1.18
ALCAM-201ENST00000306107 RANGAP1P46060 587 aaPredicted RBP22.33■■□□□ 1.16
ALCAM-201ENST00000306107 ATP1B4Q9UN42 357 aaPredicted RBP22.14■■□□□ 1.13
ALCAM-201ENST00000306107 TTBK1Q5TCY1 1321 aaPredicted RBP22.11■■□□□ 1.13
ALCAM-201ENST00000306107 ABCC9O60706 1549 aa22.08■■□□□ 1.12
ALCAM-201ENST00000306107 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
ALCAM-201ENST00000306107 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.11
ALCAM-201ENST00000306107 UBTFP17480 764 aaKnown RBP21.89■■□□□ 1.1
ALCAM-201ENST00000306107 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
ALCAM-201ENST00000306107 HNRNPUL2Q1KMD3 747 aaKnown RBP21.58■■□□□ 1.05
ALCAM-201ENST00000306107 MYT1LQ9UL68 1186 aa21.53■■□□□ 1.04
ALCAM-201ENST00000306107 PCGF6Q9BYE7 350 aa21.44■■□□□ 1.02
ALCAM-201ENST00000306107 PPARGC1BQ86YN6 1023 aaKnown RBP21.23■□□□□ 0.99
ALCAM-201ENST00000306107 FBLN2P98095 1184 aa21.21■□□□□ 0.99
ALCAM-201ENST00000306107 ITGAEP38570 1179 aa21.11■□□□□ 0.97
ALCAM-201ENST00000306107 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
ALCAM-201ENST00000306107 CHIC1Q5VXU3 224 aa21.09■□□□□ 0.97
ALCAM-201ENST00000306107 LOC105371045A0A1W2PR82 267 aa20.89■□□□□ 0.93
ALCAM-201ENST00000306107 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
ALCAM-201ENST00000306107 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
ALCAM-201ENST00000306107 SCRIBQ14160 1630 aa20.69■□□□□ 0.9
ALCAM-201ENST00000306107 ARID3CA6NKF2 412 aa20.65■□□□□ 0.9
ALCAM-201ENST00000306107 ZEB1P37275 1124 aaPredicted RBP20.6■□□□□ 0.89
ALCAM-201ENST00000306107 FAM50AQ14320 339 aaKnown RBP20.59■□□□□ 0.89
ALCAM-201ENST00000306107 P3H3Q8IVL6 736 aa20.59■□□□□ 0.89
ALCAM-201ENST00000306107 SLC4A1APQ9BWU0 796 aaKnown RBP20.53■□□□□ 0.88
ALCAM-201ENST00000306107 CNGB1Q14028 1251 aaPredicted RBP20.52■□□□□ 0.88
ALCAM-201ENST00000306107 TRIM52Q96A61 297 aa20.47■□□□□ 0.87
ALCAM-201ENST00000306107 NPM1P06748 294 aaKnown RBP eCLIP20.46■□□□□ 0.87
ALCAM-201ENST00000306107 TRIM26Q12899 539 aaPredicted RBP20.44■□□□□ 0.86
ALCAM-201ENST00000306107 ZNF777Q9ULD5 760 aaPredicted RBP20.34■□□□□ 0.85
ALCAM-201ENST00000306107 PLPPR3Q6T4P5 718 aa20.34■□□□□ 0.85
ALCAM-201ENST00000306107 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
ALCAM-201ENST00000306107 BCANQ96GW7 911 aa20.32■□□□□ 0.84
ALCAM-201ENST00000306107 ESF1Q9H501 851 aaKnown RBP20.3■□□□□ 0.84
ALCAM-201ENST00000306107 CHMP7Q8WUX9 453 aaPredicted RBP20.27■□□□□ 0.84
ALCAM-201ENST00000306107 CDK11AQ9UQ88 783 aaPredicted RBP20.26■□□□□ 0.83
ALCAM-201ENST00000306107 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
ALCAM-201ENST00000306107 ZCCHC6Q5VYS8 1495 aaKnown RBP20.25■□□□□ 0.83
ALCAM-201ENST00000306107 CENPBP07199 599 aaPredicted RBP20.24■□□□□ 0.83
ALCAM-201ENST00000306107 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
ALCAM-201ENST00000306107 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
ALCAM-201ENST00000306107 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
ALCAM-201ENST00000306107 NEUROD1Q13562 356 aa20.15■□□□□ 0.82
ALCAM-201ENST00000306107 NEFLP07196 543 aa20.14■□□□□ 0.81
ALCAM-201ENST00000306107 STAG3Q9UJ98 1225 aa20.04■□□□□ 0.8
ALCAM-201ENST00000306107 CHGAP10645 457 aaKnown RBP20.01■□□□□ 0.79
ALCAM-201ENST00000306107 ERCC6Q03468 1493 aa19.96■□□□□ 0.79
ALCAM-201ENST00000306107 NACADO15069 1562 aa19.95■□□□□ 0.78
ALCAM-201ENST00000306107 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
ALCAM-201ENST00000306107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.85■□□□□ 0.776e-12■■□□□ 12.2
ALCAM-201ENST00000306107 BAZ1BQ9UIG0 1483 aaKnown RBP19.84■□□□□ 0.77
ALCAM-201ENST00000306107 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
ALCAM-201ENST00000306107 SLC24A1O60721 1099 aa19.83■□□□□ 0.77
ALCAM-201ENST00000306107 HRCP23327 699 aa19.83■□□□□ 0.77
ALCAM-201ENST00000306107 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
ALCAM-201ENST00000306107 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
ALCAM-201ENST00000306107 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
ALCAM-201ENST00000306107 CHIC2Q9UKJ5 165 aa19.79■□□□□ 0.76
ALCAM-201ENST00000306107 ARID4BQ4LE39 1312 aaPredicted RBP19.73■□□□□ 0.75
ALCAM-201ENST00000306107 PLEKHD1A6NEE1 506 aa19.73■□□□□ 0.75
ALCAM-201ENST00000306107 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
ALCAM-201ENST00000306107 MTUS2Q5JR59 1369 aa19.67■□□□□ 0.74
ALCAM-201ENST00000306107 SENP3Q9H4L4 574 aaPredicted RBP19.65■□□□□ 0.74
ALCAM-201ENST00000306107 NEFMP07197 916 aa19.62■□□□□ 0.73
ALCAM-201ENST00000306107 SCAF1Q9H7N4 1312 aaKnown RBP19.54■□□□□ 0.72
ALCAM-201ENST00000306107 WRNQ14191 1432 aaPredicted RBP eCLIP19.54■□□□□ 0.72
ALCAM-201ENST00000306107 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
ALCAM-201ENST00000306107 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
ALCAM-201ENST00000306107 C14orf37Q86TY3 774 aa19.51■□□□□ 0.71
ALCAM-201ENST00000306107 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
ALCAM-201ENST00000306107 PLEKHG5O94827 1062 aa19.51■□□□□ 0.71
ALCAM-201ENST00000306107 DAXXQ9UER7 740 aaPredicted RBP19.49■□□□□ 0.71
ALCAM-201ENST00000306107 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
ALCAM-201ENST00000306107 ANP32CO43423 234 aa19.47■□□□□ 0.71
ALCAM-201ENST00000306107 DIEXFQ68CQ4 756 aaKnown RBP19.47■□□□□ 0.71
ALCAM-201ENST00000306107 BCL11AQ9H165 835 aa19.47■□□□□ 0.71
ALCAM-201ENST00000306107 KIF27Q86VH2 1401 aa19.47■□□□□ 0.71
ALCAM-201ENST00000306107 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
ALCAM-201ENST00000306107 CFDP1Q9UEE9 299 aaPredicted RBP19.45■□□□□ 0.7
ALCAM-201ENST00000306107 RRP7BPQ9NSQ0 103 aa19.44■□□□□ 0.7
ALCAM-201ENST00000306107 CLIP1P30622 1438 aa19.41■□□□□ 0.7
ALCAM-201ENST00000306107 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
ALCAM-201ENST00000306107 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
ALCAM-201ENST00000306107 A0A0G2JS52 829 aa19.4■□□□□ 0.7
ALCAM-201ENST00000306107 MLECQ14165 292 aa19.39■□□□□ 0.69
ALCAM-201ENST00000306107 ZBTB47Q9UFB7 747 aaPredicted RBP19.37■□□□□ 0.69
ALCAM-201ENST00000306107 RGL3Q3MIN7 710 aa19.32■□□□□ 0.68
ALCAM-201ENST00000306107 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
ALCAM-201ENST00000306107 CANXP27824 592 aaKnown RBP19.3■□□□□ 0.68
ALCAM-201ENST00000306107 ZBTB7CA1YPR0 619 aa19.29■□□□□ 0.68
ALCAM-201ENST00000306107 CUX2O14529 1486 aa19.28■□□□□ 0.68
ALCAM-201ENST00000306107 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.67
ALCAM-201ENST00000306107 DCAF1Q9Y4B6 1507 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms