Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 AC112693.3-201ENST00000624819 1983 ntBASIC14.04□□□□□ -0.16
SP9P0CG40 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 RPL3P2-204ENST00000413027 1203 ntBASIC14.04□□□□□ -0.16
SP9P0CG40 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC14.04□□□□□ -0.16
SP9P0CG40 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 LINC00115-201ENST00000473798 1317 ntBASIC14.04□□□□□ -0.16
SP9P0CG40 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
SP9P0CG40 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SP9P0CG40 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SP9P0CG40 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.04□□□□□ -0.16
SP9P0CG40 AC020658.6-201ENST00000623564 1870 ntBASIC14.04□□□□□ -0.16
SP9P0CG40 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.03□□□□□ -0.16
SP9P0CG40 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.03□□□□□ -0.16
SP9P0CG40 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.03□□□□□ -0.16
SP9P0CG40 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC14.03□□□□□ -0.16
SP9P0CG40 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.03□□□□□ -0.16
SP9P0CG40 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 CDK4P1-201ENST00000454213 828 ntBASIC14.03□□□□□ -0.16
SP9P0CG40 RN7SL578P-201ENST00000477781 283 ntBASIC14.03□□□□□ -0.16
SP9P0CG40 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 AC004923.3-201ENST00000527532 355 ntBASIC14.03□□□□□ -0.16
SP9P0CG40 MBP-230ENST00000528160 584 ntTSL 5 BASIC14.03□□□□□ -0.16
SP9P0CG40 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SP9P0CG40 AC026336.4-201ENST00000624565 1050 ntBASIC14.03□□□□□ -0.16
SP9P0CG40 AC245369.7-201ENST00000631386 350 ntBASIC14.03□□□□□ -0.16
SP9P0CG40 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.03□□□□□ -0.16
SP9P0CG40 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 AC011270.2-201ENST00000624293 2550 ntBASIC14.03□□□□□ -0.16
SP9P0CG40 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.03□□□□□ -0.16
SP9P0CG40 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SP9P0CG40 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC14.02□□□□□ -0.16
SP9P0CG40 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
SP9P0CG40 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
SP9P0CG40 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.02□□□□□ -0.16
SP9P0CG40 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
SP9P0CG40 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SP9P0CG40 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms