RNA–Protein interactions for RNA: ENST00000454213.1

CDK4P1-201, Transcript of cyclin dependent kinase 4 pseudogene 1, humanhuman

BASIC

Gene CDK4P1, Length 828 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4P1-201ENST00000454213 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
CDK4P1-201ENST00000454213 ABCC9O60706 1549 aa28.99■■■□□ 2.23
CDK4P1-201ENST00000454213 CCDC180Q9P1Z9 1646 aa28.97■■■□□ 2.23
CDK4P1-201ENST00000454213 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
CDK4P1-201ENST00000454213 NACADO15069 1562 aa27.34■■□□□ 1.97
CDK4P1-201ENST00000454213 DCAF8L2P0C7V8 631 aa27.25■■□□□ 1.95
CDK4P1-201ENST00000454213 DNAJC5BQ9UF47 199 aa27.21■■□□□ 1.95
CDK4P1-201ENST00000454213 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
CDK4P1-201ENST00000454213 PABPN1Q86U42 306 aaKnown RBP eCLIP27■■□□□ 1.91
CDK4P1-201ENST00000454213 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
CDK4P1-201ENST00000454213 BICRAQ9NZM4 1560 aa26.83■■□□□ 1.89
CDK4P1-201ENST00000454213 ZCCHC6Q5VYS8 1495 aaKnown RBP26.78■■□□□ 1.88
CDK4P1-201ENST00000454213 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
CDK4P1-201ENST00000454213 SCRIBQ14160 1630 aa26.48■■□□□ 1.83
CDK4P1-201ENST00000454213 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
CDK4P1-201ENST00000454213 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
CDK4P1-201ENST00000454213 EIF4G1Q04637 1599 aaKnown RBP26.12■■□□□ 1.77
CDK4P1-201ENST00000454213 CECR2Q9BXF3 1484 aa26.07■■□□□ 1.76
CDK4P1-201ENST00000454213 NCAPD3P42695 1498 aa25.24■■□□□ 1.63
CDK4P1-201ENST00000454213 SMARCA4P51532 1647 aa25.23■■□□□ 1.63
CDK4P1-201ENST00000454213 ATAD2BQ9ULI0 1458 aa25.2■■□□□ 1.62
CDK4P1-201ENST00000454213 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
CDK4P1-201ENST00000454213 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
CDK4P1-201ENST00000454213 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
CDK4P1-201ENST00000454213 ERCC6Q03468 1493 aa24.98■■□□□ 1.59
CDK4P1-201ENST00000454213 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
CDK4P1-201ENST00000454213 NESP48681 1621 aa24.95■■□□□ 1.58
CDK4P1-201ENST00000454213 MROH2BQ7Z745 1585 aa24.94■■□□□ 1.58
CDK4P1-201ENST00000454213 PEG3Q9GZU2 1588 aa24.93■■□□□ 1.58
CDK4P1-201ENST00000454213 CUX2O14529 1486 aa24.89■■□□□ 1.57
CDK4P1-201ENST00000454213 DNAJC5Q9H3Z4 198 aa24.86■■□□□ 1.57
CDK4P1-201ENST00000454213 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
CDK4P1-201ENST00000454213 WIZO95785 1651 aa24.67■■□□□ 1.54
CDK4P1-201ENST00000454213 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
CDK4P1-201ENST00000454213 KIF21AQ7Z4S6 1674 aa24.65■■□□□ 1.54
CDK4P1-201ENST00000454213 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
CDK4P1-201ENST00000454213 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
CDK4P1-201ENST00000454213 RSF1Q96T23 1441 aaPredicted RBP24.39■■□□□ 1.5
CDK4P1-201ENST00000454213 MRC2Q9UBG0 1479 aa24.34■■□□□ 1.49
CDK4P1-201ENST00000454213 WDR62O43379 1518 aa24.3■■□□□ 1.48
CDK4P1-201ENST00000454213 TOP2AP11388 1531 aaKnown RBP24.29■■□□□ 1.48
CDK4P1-201ENST00000454213 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
CDK4P1-201ENST00000454213 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
CDK4P1-201ENST00000454213 CFTRP13569 1480 aa24.22■■□□□ 1.47
CDK4P1-201ENST00000454213 URB2Q14146 1524 aaKnown RBP24.08■■□□□ 1.45
CDK4P1-201ENST00000454213 PRDM2Q13029 1718 aa24.06■■□□□ 1.44
CDK4P1-201ENST00000454213 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
CDK4P1-201ENST00000454213 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
CDK4P1-201ENST00000454213 TOPBP1Q92547 1522 aa23.79■■□□□ 1.4
CDK4P1-201ENST00000454213 ZNF608Q9ULD9 1512 aaPredicted RBP23.79■■□□□ 1.4
CDK4P1-201ENST00000454213 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
CDK4P1-201ENST00000454213 IFT140Q96RY7 1462 aa23.74■■□□□ 1.39
CDK4P1-201ENST00000454213 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
CDK4P1-201ENST00000454213 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
CDK4P1-201ENST00000454213 ABCC8Q09428 1581 aa23.64■■□□□ 1.37
CDK4P1-201ENST00000454213 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
CDK4P1-201ENST00000454213 POLA1P09884 1462 aaPredicted RBP23.56■■□□□ 1.36
CDK4P1-201ENST00000454213 AQRO60306 1485 aaKnown RBP eCLIP23.55■■□□□ 1.36
CDK4P1-201ENST00000454213 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
CDK4P1-201ENST00000454213 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
CDK4P1-201ENST00000454213 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
CDK4P1-201ENST00000454213 CHD1O14646 1710 aa23.52■■□□□ 1.36
CDK4P1-201ENST00000454213 RAD54L2Q9Y4B4 1467 aa23.5■■□□□ 1.35
CDK4P1-201ENST00000454213 ARHGEF11O15085 1522 aa23.44■■□□□ 1.34
CDK4P1-201ENST00000454213 CUX1P39880 1505 aa23.43■■□□□ 1.34
CDK4P1-201ENST00000454213 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
CDK4P1-201ENST00000454213 SOGA1O94964 1423 aa23.42■■□□□ 1.34
CDK4P1-201ENST00000454213 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
CDK4P1-201ENST00000454213 FBLN2P98095 1184 aa23.36■■□□□ 1.33
CDK4P1-201ENST00000454213 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
CDK4P1-201ENST00000454213 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
CDK4P1-201ENST00000454213 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
CDK4P1-201ENST00000454213 CYB5RLQ6IPT4 315 aa23.24■■□□□ 1.31
CDK4P1-201ENST00000454213 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
CDK4P1-201ENST00000454213 PBRM1Q86U86 1689 aa23.21■■□□□ 1.31
CDK4P1-201ENST00000454213 GRIN2BQ13224 1484 aa23.2■■□□□ 1.3
CDK4P1-201ENST00000454213 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
CDK4P1-201ENST00000454213 MAGI1Q96QZ7 1491 aaPredicted RBP23.18■■□□□ 1.3
CDK4P1-201ENST00000454213 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CDK4P1-201ENST00000454213 GAPVD1Q14C86 1478 aa23.14■■□□□ 1.29
CDK4P1-201ENST00000454213 SYNJ2O15056 1496 aa23.13■■□□□ 1.29
CDK4P1-201ENST00000454213 ABCA5Q8WWZ7 1642 aa23.13■■□□□ 1.29
CDK4P1-201ENST00000454213 SYNJ1O43426 1573 aa23.13■■□□□ 1.29
CDK4P1-201ENST00000454213 ABCA10Q8WWZ4 1543 aa23.12■■□□□ 1.29
CDK4P1-201ENST00000454213 BIVM-ERCC5R4GMW8 1640 aa23.04■■□□□ 1.28
CDK4P1-201ENST00000454213 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
CDK4P1-201ENST00000454213 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
CDK4P1-201ENST00000454213 TRHP20396 242 aaPredicted RBP22.96■■□□□ 1.27
CDK4P1-201ENST00000454213 ADAMTS12P58397 1594 aa22.96■■□□□ 1.27
CDK4P1-201ENST00000454213 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
CDK4P1-201ENST00000454213 CEP170Q5SW79 1584 aa22.9■■□□□ 1.26
CDK4P1-201ENST00000454213 ERCC6L2Q5T890 1561 aa22.9■■□□□ 1.26
CDK4P1-201ENST00000454213 NUP160Q12769 1436 aa22.83■■□□□ 1.25
CDK4P1-201ENST00000454213 FHAD1B1AJZ9 1412 aa22.82■■□□□ 1.24
CDK4P1-201ENST00000454213 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
CDK4P1-201ENST00000454213 SHROOM2Q13796 1616 aa22.78■■□□□ 1.24
CDK4P1-201ENST00000454213 RUSC2Q8N2Y8 1516 aa22.63■■□□□ 1.21
CDK4P1-201ENST00000454213 PRG4Q92954 1404 aaPredicted RBP22.63■■□□□ 1.21
CDK4P1-201ENST00000454213 JPH4Q96JJ6 628 aa22.57■■□□□ 1.2
CDK4P1-201ENST00000454213 IGF1RP08069 1367 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms