RNA–Protein interactions for RNA: ENST00000608606.1

AC090004.1-201, humanhuman

APPRIS P1 TSL 5 BASIC

Gene AC090004.1, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090004.1-201ENST00000608606 NISCHQ9Y2I1 1504 aa32.92■■■□□ 2.86
AC090004.1-201ENST00000608606 CCDC180Q9P1Z9 1646 aa29.25■■■□□ 2.27
AC090004.1-201ENST00000608606 ABCC9O60706 1549 aa28.57■■■□□ 2.16
AC090004.1-201ENST00000608606 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
AC090004.1-201ENST00000608606 NACADO15069 1562 aa27.46■■□□□ 1.99
AC090004.1-201ENST00000608606 DCAF8L2P0C7V8 631 aa27.44■■□□□ 1.98
AC090004.1-201ENST00000608606 ZCCHC6Q5VYS8 1495 aaKnown RBP27.44■■□□□ 1.98
AC090004.1-201ENST00000608606 MYO15BQ96JP2 1530 aa27.3■■□□□ 1.96
AC090004.1-201ENST00000608606 DCAF1Q9Y4B6 1507 aa27.21■■□□□ 1.95
AC090004.1-201ENST00000608606 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
AC090004.1-201ENST00000608606 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
AC090004.1-201ENST00000608606 BICRAQ9NZM4 1560 aa26.71■■□□□ 1.87
AC090004.1-201ENST00000608606 PABPN1Q86U42 306 aaKnown RBP eCLIP26.71■■□□□ 1.87
AC090004.1-201ENST00000608606 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
AC090004.1-201ENST00000608606 DNAJC5BQ9UF47 199 aa26.22■■□□□ 1.79
AC090004.1-201ENST00000608606 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
AC090004.1-201ENST00000608606 CC2D2AQ9P2K1 1620 aa25.86■■□□□ 1.73
AC090004.1-201ENST00000608606 CECR2Q9BXF3 1484 aa25.67■■□□□ 1.7
AC090004.1-201ENST00000608606 SMARCA4P51532 1647 aa25.55■■□□□ 1.68
AC090004.1-201ENST00000608606 BAZ1AQ9NRL2 1556 aaPredicted RBP25.49■■□□□ 1.67
AC090004.1-201ENST00000608606 MROH2BQ7Z745 1585 aa25.39■■□□□ 1.66
AC090004.1-201ENST00000608606 ATAD2BQ9ULI0 1458 aa25.38■■□□□ 1.65
AC090004.1-201ENST00000608606 NCAPD3P42695 1498 aa25.34■■□□□ 1.65
AC090004.1-201ENST00000608606 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
AC090004.1-201ENST00000608606 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
AC090004.1-201ENST00000608606 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
AC090004.1-201ENST00000608606 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
AC090004.1-201ENST00000608606 WIZO95785 1651 aa25.15■■□□□ 1.62
AC090004.1-201ENST00000608606 RSF1Q96T23 1441 aaPredicted RBP25.11■■□□□ 1.61
AC090004.1-201ENST00000608606 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
AC090004.1-201ENST00000608606 NESP48681 1621 aa24.77■■□□□ 1.56
AC090004.1-201ENST00000608606 LAMC3Q9Y6N6 1575 aa24.67■■□□□ 1.54
AC090004.1-201ENST00000608606 CADPSQ9ULU8 1353 aa24.6■■□□□ 1.53
AC090004.1-201ENST00000608606 ERCC6Q03468 1493 aa24.58■■□□□ 1.52
AC090004.1-201ENST00000608606 CCDC88BA6NC98 1476 aa24.56■■□□□ 1.52
AC090004.1-201ENST00000608606 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
AC090004.1-201ENST00000608606 SUPT5HO00267 1087 aaKnown RBP24.48■■□□□ 1.51
AC090004.1-201ENST00000608606 CFTRP13569 1480 aa24.47■■□□□ 1.51
AC090004.1-201ENST00000608606 PDS5BQ9NTI5 1447 aa24.46■■□□□ 1.51
AC090004.1-201ENST00000608606 THOC2Q8NI27 1593 aaKnown RBP24.38■■□□□ 1.49
AC090004.1-201ENST00000608606 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
AC090004.1-201ENST00000608606 FANCD2Q9BXW9 1451 aa24.32■■□□□ 1.48
AC090004.1-201ENST00000608606 CUX2O14529 1486 aa24.31■■□□□ 1.48
AC090004.1-201ENST00000608606 CEP164Q9UPV0 1460 aa24.28■■□□□ 1.48
AC090004.1-201ENST00000608606 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
AC090004.1-201ENST00000608606 WDR62O43379 1518 aa24.19■■□□□ 1.46
AC090004.1-201ENST00000608606 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
AC090004.1-201ENST00000608606 TOPBP1Q92547 1522 aa23.96■■□□□ 1.43
AC090004.1-201ENST00000608606 DNMBPQ6XZF7 1577 aa23.94■■□□□ 1.42
AC090004.1-201ENST00000608606 ABCC8Q09428 1581 aa23.9■■□□□ 1.42
AC090004.1-201ENST00000608606 CUX1P39880 1505 aa23.82■■□□□ 1.4
AC090004.1-201ENST00000608606 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
AC090004.1-201ENST00000608606 POLA1P09884 1462 aaPredicted RBP23.76■■□□□ 1.39
AC090004.1-201ENST00000608606 FGD5Q6ZNL6 1462 aa23.72■■□□□ 1.39
AC090004.1-201ENST00000608606 TARBP1Q13395 1621 aaKnown RBP23.72■■□□□ 1.39
AC090004.1-201ENST00000608606 ZNF608Q9ULD9 1512 aaPredicted RBP23.7■■□□□ 1.38
AC090004.1-201ENST00000608606 RAD54L2Q9Y4B4 1467 aa23.68■■□□□ 1.38
AC090004.1-201ENST00000608606 SYNJ1O43426 1573 aa23.65■■□□□ 1.38
AC090004.1-201ENST00000608606 SOGA1O94964 1423 aa23.64■■□□□ 1.37
AC090004.1-201ENST00000608606 WRNQ14191 1432 aaPredicted RBP eCLIP23.64■■□□□ 1.37
AC090004.1-201ENST00000608606 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
AC090004.1-201ENST00000608606 TOP2BQ02880 1626 aa23.62■■□□□ 1.37
AC090004.1-201ENST00000608606 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
AC090004.1-201ENST00000608606 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.36
AC090004.1-201ENST00000608606 WDR97A6NE52 1622 aa23.56■■□□□ 1.36
AC090004.1-201ENST00000608606 TDRD9Q8NDG6 1382 aaKnown RBP23.52■■□□□ 1.36
AC090004.1-201ENST00000608606 DNAJC5Q9H3Z4 198 aa23.5■■□□□ 1.35
AC090004.1-201ENST00000608606 ABCA10Q8WWZ4 1543 aa23.48■■□□□ 1.35
AC090004.1-201ENST00000608606 ABCA5Q8WWZ7 1642 aa23.41■■□□□ 1.34
AC090004.1-201ENST00000608606 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
AC090004.1-201ENST00000608606 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
AC090004.1-201ENST00000608606 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
AC090004.1-201ENST00000608606 SNAPC4Q5SXM2 1469 aa23.35■■□□□ 1.33
AC090004.1-201ENST00000608606 CHD1O14646 1710 aa23.33■■□□□ 1.33
AC090004.1-201ENST00000608606 OSCARQ8IYS5 282 aa23.29■■□□□ 1.32
AC090004.1-201ENST00000608606 MAGI1Q96QZ7 1491 aaPredicted RBP23.29■■□□□ 1.32
AC090004.1-201ENST00000608606 FBLN2P98095 1184 aa23.22■■□□□ 1.31
AC090004.1-201ENST00000608606 SYNJ2O15056 1496 aa23.2■■□□□ 1.3
AC090004.1-201ENST00000608606 ERICH3Q5RHP9 1530 aa23.18■■□□□ 1.3
AC090004.1-201ENST00000608606 ADAMTS12P58397 1594 aa23.18■■□□□ 1.3
AC090004.1-201ENST00000608606 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
AC090004.1-201ENST00000608606 KIF27Q86VH2 1401 aa23.13■■□□□ 1.29
AC090004.1-201ENST00000608606 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
AC090004.1-201ENST00000608606 TRIM41Q8WV44 630 aa23.09■■□□□ 1.29
AC090004.1-201ENST00000608606 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
AC090004.1-201ENST00000608606 IGF1RP08069 1367 aa23.06■■□□□ 1.28
AC090004.1-201ENST00000608606 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
AC090004.1-201ENST00000608606 RUSC2Q8N2Y8 1516 aa23.03■■□□□ 1.28
AC090004.1-201ENST00000608606 CUL7Q14999 1698 aa23■■□□□ 1.27
AC090004.1-201ENST00000608606 CEP170Q5SW79 1584 aa22.99■■□□□ 1.27
AC090004.1-201ENST00000608606 RIMBP3CA6NJZ7 1639 aa22.99■■□□□ 1.27
AC090004.1-201ENST00000608606 RIMBP3BA6NNM3 1639 aa22.99■■□□□ 1.27
AC090004.1-201ENST00000608606 RIMBP3Q9UFD9 1639 aa22.99■■□□□ 1.27
AC090004.1-201ENST00000608606 NUP160Q12769 1436 aa22.97■■□□□ 1.27
AC090004.1-201ENST00000608606 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
AC090004.1-201ENST00000608606 CARMIL1Q5VZK9 1371 aa22.91■■□□□ 1.26
AC090004.1-201ENST00000608606 CHIC1Q5VXU3 224 aa22.9■■□□□ 1.26
AC090004.1-201ENST00000608606 SHROOM2Q13796 1616 aa22.82■■□□□ 1.24
AC090004.1-201ENST00000608606 ARAP1Q96P48 1450 aa22.8■■□□□ 1.24
AC090004.1-201ENST00000608606 ERCC6L2Q5T890 1561 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms