RNA–Protein interactions for RNA: ENST00000408946.6

PYM1-203, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

TSL 1 (best) BASIC

Gene PYM1, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-203ENST00000408946 NISCHQ9Y2I1 1504 aa31.79■■■□□ 2.68
PYM1-203ENST00000408946 ABCC9O60706 1549 aa29.39■■■□□ 2.3
PYM1-203ENST00000408946 CCDC180Q9P1Z9 1646 aa28.69■■■□□ 2.18
PYM1-203ENST00000408946 DNAJC5BQ9UF47 199 aa28.17■■■□□ 2.1
PYM1-203ENST00000408946 RB1CC1Q8TDY2 1594 aa27.6■■■□□ 2.01
PYM1-203ENST00000408946 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
PYM1-203ENST00000408946 NACADO15069 1562 aa27.26■■□□□ 1.96
PYM1-203ENST00000408946 DCAF8L2P0C7V8 631 aa27.1■■□□□ 1.93
PYM1-203ENST00000408946 UNC13AQ9UPW8 1703 aa27.07■■□□□ 1.92
PYM1-203ENST00000408946 BICRAQ9NZM4 1560 aa26.95■■□□□ 1.9
PYM1-203ENST00000408946 MYO15BQ96JP2 1530 aa26.67■■□□□ 1.86
PYM1-203ENST00000408946 CECR2Q9BXF3 1484 aa26.49■■□□□ 1.83
PYM1-203ENST00000408946 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
PYM1-203ENST00000408946 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
PYM1-203ENST00000408946 EIF4G1Q04637 1599 aaKnown RBP26.27■■□□□ 1.8
PYM1-203ENST00000408946 ZCCHC6Q5VYS8 1495 aaKnown RBP26.23■■□□□ 1.79
PYM1-203ENST00000408946 SCRIBQ14160 1630 aa26.23■■□□□ 1.79
PYM1-203ENST00000408946 DCAF1Q9Y4B6 1507 aa26.15■■□□□ 1.78
PYM1-203ENST00000408946 DNAJC5Q9H3Z4 198 aa26.15■■□□□ 1.78
PYM1-203ENST00000408946 CUX2O14529 1486 aa25.46■■□□□ 1.67
PYM1-203ENST00000408946 AEBP2Q6ZN18 517 aaPredicted RBP25.35■■□□□ 1.65
PYM1-203ENST00000408946 ERCC6Q03468 1493 aa25.33■■□□□ 1.65
PYM1-203ENST00000408946 NCAPD3P42695 1498 aa25.22■■□□□ 1.63
PYM1-203ENST00000408946 NESP48681 1621 aa25.12■■□□□ 1.61
PYM1-203ENST00000408946 ATAD2BQ9ULI0 1458 aa25.1■■□□□ 1.61
PYM1-203ENST00000408946 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
PYM1-203ENST00000408946 SMARCA4P51532 1647 aa24.93■■□□□ 1.58
PYM1-203ENST00000408946 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
PYM1-203ENST00000408946 THOC2Q8NI27 1593 aaKnown RBP24.92■■□□□ 1.58
PYM1-203ENST00000408946 TRIM41Q8WV44 630 aa24.81■■□□□ 1.56
PYM1-203ENST00000408946 BAZ1BQ9UIG0 1483 aaKnown RBP24.79■■□□□ 1.56
PYM1-203ENST00000408946 KIF21AQ7Z4S6 1674 aa24.72■■□□□ 1.55
PYM1-203ENST00000408946 LAMC3Q9Y6N6 1575 aa24.71■■□□□ 1.55
PYM1-203ENST00000408946 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
PYM1-203ENST00000408946 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
PYM1-203ENST00000408946 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
PYM1-203ENST00000408946 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
PYM1-203ENST00000408946 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
PYM1-203ENST00000408946 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
PYM1-203ENST00000408946 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
PYM1-203ENST00000408946 WDR62O43379 1518 aa24.41■■□□□ 1.5
PYM1-203ENST00000408946 WIZO95785 1651 aa24.22■■□□□ 1.47
PYM1-203ENST00000408946 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
PYM1-203ENST00000408946 OSCARQ8IYS5 282 aa24.21■■□□□ 1.47
PYM1-203ENST00000408946 FANCD2Q9BXW9 1451 aa24.18■■□□□ 1.46
PYM1-203ENST00000408946 URB2Q14146 1524 aaKnown RBP24.07■■□□□ 1.44
PYM1-203ENST00000408946 CFTRP13569 1480 aa24.05■■□□□ 1.44
PYM1-203ENST00000408946 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
PYM1-203ENST00000408946 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
PYM1-203ENST00000408946 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
PYM1-203ENST00000408946 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.41
PYM1-203ENST00000408946 ARHGEF11O15085 1522 aa23.88■■□□□ 1.41
PYM1-203ENST00000408946 TOP2AP11388 1531 aaKnown RBP23.81■■□□□ 1.4
PYM1-203ENST00000408946 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
PYM1-203ENST00000408946 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
PYM1-203ENST00000408946 CYB5RLQ6IPT4 315 aa23.74■■□□□ 1.39
PYM1-203ENST00000408946 PRDM2Q13029 1718 aa23.7■■□□□ 1.38
PYM1-203ENST00000408946 TOPBP1Q92547 1522 aa23.67■■□□□ 1.38
PYM1-203ENST00000408946 EIF4G3O43432 1585 aaKnown RBP23.66■■□□□ 1.38
PYM1-203ENST00000408946 ARAP1Q96P48 1450 aa23.64■■□□□ 1.38
PYM1-203ENST00000408946 TRHP20396 242 aaPredicted RBP23.63■■□□□ 1.37
PYM1-203ENST00000408946 CHD1O14646 1710 aa23.6■■□□□ 1.37
PYM1-203ENST00000408946 CCDC88BA6NC98 1476 aa23.59■■□□□ 1.37
PYM1-203ENST00000408946 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.369e-7■■■■■ 31.2
PYM1-203ENST00000408946 TARBP1Q13395 1621 aaKnown RBP23.51■■□□□ 1.35
PYM1-203ENST00000408946 DNMBPQ6XZF7 1577 aa23.49■■□□□ 1.35
PYM1-203ENST00000408946 FBLN2P98095 1184 aa23.48■■□□□ 1.35
PYM1-203ENST00000408946 ABCC8Q09428 1581 aa23.44■■□□□ 1.34
PYM1-203ENST00000408946 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
PYM1-203ENST00000408946 RAD54L2Q9Y4B4 1467 aa23.37■■□□□ 1.33
PYM1-203ENST00000408946 TDRD9Q8NDG6 1382 aaKnown RBP23.34■■□□□ 1.33
PYM1-203ENST00000408946 CLASP1Q7Z460 1538 aa23.32■■□□□ 1.32
PYM1-203ENST00000408946 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
PYM1-203ENST00000408946 SOGA1O94964 1423 aa23.25■■□□□ 1.31
PYM1-203ENST00000408946 CHMP7Q8WUX9 453 aaPredicted RBP23.18■■□□□ 1.3
PYM1-203ENST00000408946 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
PYM1-203ENST00000408946 FGD5Q6ZNL6 1462 aa23.17■■□□□ 1.3
PYM1-203ENST00000408946 MAGI1Q96QZ7 1491 aaPredicted RBP23.13■■□□□ 1.29
PYM1-203ENST00000408946 GRIN2BQ13224 1484 aa23.1■■□□□ 1.29
PYM1-203ENST00000408946 CUX1P39880 1505 aa23.09■■□□□ 1.29
PYM1-203ENST00000408946 WDR97A6NE52 1622 aa23.09■■□□□ 1.29
PYM1-203ENST00000408946 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
PYM1-203ENST00000408946 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
PYM1-203ENST00000408946 ERCC6L2Q5T890 1561 aa23.01■■□□□ 1.27
PYM1-203ENST00000408946 PBRM1Q86U86 1689 aa22.99■■□□□ 1.27
PYM1-203ENST00000408946 ABCA5Q8WWZ7 1642 aa22.88■■□□□ 1.25
PYM1-203ENST00000408946 ABCA10Q8WWZ4 1543 aa22.84■■□□□ 1.25
PYM1-203ENST00000408946 CEP170Q5SW79 1584 aa22.83■■□□□ 1.25
PYM1-203ENST00000408946 GRIN2AQ12879 1464 aa22.82■■□□□ 1.24
PYM1-203ENST00000408946 NUP160Q12769 1436 aa22.78■■□□□ 1.24
PYM1-203ENST00000408946 KIF13AQ9H1H9 1805 aa22.77■■□□□ 1.24
PYM1-203ENST00000408946 ADAMTS12P58397 1594 aa22.75■■□□□ 1.23
PYM1-203ENST00000408946 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
PYM1-203ENST00000408946 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
PYM1-203ENST00000408946 WRNQ14191 1432 aaPredicted RBP eCLIP22.61■■□□□ 1.21
PYM1-203ENST00000408946 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
PYM1-203ENST00000408946 FAM69CQ0P6D2 419 aa22.57■■□□□ 1.2
PYM1-203ENST00000408946 ABCC10Q5T3U5 1492 aa22.55■■□□□ 1.2
PYM1-203ENST00000408946 KDM4FA0A1W2PPD8 638 aa22.55■■□□□ 1.2
PYM1-203ENST00000408946 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms