RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 NISCHQ9Y2I1 1504 aa33.76■■■□□ 2.99
POLR1E-202ENST00000377798 CCDC180Q9P1Z9 1646 aa29.52■■■□□ 2.32
POLR1E-202ENST00000377798 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
POLR1E-202ENST00000377798 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
POLR1E-202ENST00000377798 ABCC9O60706 1549 aa27.9■■■□□ 2.06
POLR1E-202ENST00000377798 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
POLR1E-202ENST00000377798 MYO15BQ96JP2 1530 aa27.64■■■□□ 2.02
POLR1E-202ENST00000377798 NACADO15069 1562 aa27.48■■□□□ 1.99
POLR1E-202ENST00000377798 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
POLR1E-202ENST00000377798 RB1CC1Q8TDY2 1594 aa27.27■■□□□ 1.96
POLR1E-202ENST00000377798 SCRIBQ14160 1630 aa27.09■■□□□ 1.93
POLR1E-202ENST00000377798 UNC13AQ9UPW8 1703 aa26.74■■□□□ 1.87
POLR1E-202ENST00000377798 BICRAQ9NZM4 1560 aa26.43■■□□□ 1.82
POLR1E-202ENST00000377798 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
POLR1E-202ENST00000377798 PABPN1Q86U42 306 aaKnown RBP eCLIP26.26■■□□□ 1.79
POLR1E-202ENST00000377798 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
POLR1E-202ENST00000377798 RSF1Q96T23 1441 aaPredicted RBP26.14■■□□□ 1.78
POLR1E-202ENST00000377798 BAZ1AQ9NRL2 1556 aaPredicted RBP26.09■■□□□ 1.77
POLR1E-202ENST00000377798 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
POLR1E-202ENST00000377798 SMARCA4P51532 1647 aa25.98■■□□□ 1.75
POLR1E-202ENST00000377798 WIZO95785 1651 aa25.87■■□□□ 1.73
POLR1E-202ENST00000377798 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
POLR1E-202ENST00000377798 EIF4G1Q04637 1599 aaKnown RBP25.65■■□□□ 1.7
POLR1E-202ENST00000377798 TOP2AP11388 1531 aaKnown RBP25.61■■□□□ 1.69
POLR1E-202ENST00000377798 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
POLR1E-202ENST00000377798 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
POLR1E-202ENST00000377798 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
POLR1E-202ENST00000377798 NCAPD3P42695 1498 aa25.35■■□□□ 1.65
POLR1E-202ENST00000377798 HMGXB3Q12766 1538 aa25.33■■□□□ 1.65
POLR1E-202ENST00000377798 CCDC88BA6NC98 1476 aa25.32■■□□□ 1.64
POLR1E-202ENST00000377798 CC2D2AQ9P2K1 1620 aa25.28■■□□□ 1.64
POLR1E-202ENST00000377798 CHIC1Q5VXU3 224 aa25.19■■□□□ 1.62
POLR1E-202ENST00000377798 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
POLR1E-202ENST00000377798 ABCC8Q09428 1581 aa24.77■■□□□ 1.56
POLR1E-202ENST00000377798 CFTRP13569 1480 aa24.76■■□□□ 1.55
POLR1E-202ENST00000377798 PRDM2Q13029 1718 aa24.7■■□□□ 1.55
POLR1E-202ENST00000377798 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
POLR1E-202ENST00000377798 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
POLR1E-202ENST00000377798 WRNQ14191 1432 aaPredicted RBP eCLIP24.62■■□□□ 1.53
POLR1E-202ENST00000377798 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
POLR1E-202ENST00000377798 LAMC3Q9Y6N6 1575 aa24.52■■□□□ 1.52
POLR1E-202ENST00000377798 NESP48681 1621 aa24.48■■□□□ 1.51
POLR1E-202ENST00000377798 TOP2BQ02880 1626 aa24.45■■□□□ 1.5
POLR1E-202ENST00000377798 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
POLR1E-202ENST00000377798 FANCD2Q9BXW9 1451 aa24.42■■□□□ 1.5
POLR1E-202ENST00000377798 CUX1P39880 1505 aa24.38■■□□□ 1.49
POLR1E-202ENST00000377798 FAM9AQ8IZU1 332 aaPredicted RBP24.31■■□□□ 1.48
POLR1E-202ENST00000377798 PDS5BQ9NTI5 1447 aa24.31■■□□□ 1.48
POLR1E-202ENST00000377798 CEP164Q9UPV0 1460 aa24.28■■□□□ 1.48
POLR1E-202ENST00000377798 SOGA1O94964 1423 aa24.27■■□□□ 1.48
POLR1E-202ENST00000377798 EEA1Q15075 1411 aa24.24■■□□□ 1.47
POLR1E-202ENST00000377798 KIF21AQ7Z4S6 1674 aa24.23■■□□□ 1.47
POLR1E-202ENST00000377798 DNMBPQ6XZF7 1577 aa24.21■■□□□ 1.47
POLR1E-202ENST00000377798 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
POLR1E-202ENST00000377798 RUSC2Q8N2Y8 1516 aa24.18■■□□□ 1.46
POLR1E-202ENST00000377798 TOPBP1Q92547 1522 aa24.15■■□□□ 1.46
POLR1E-202ENST00000377798 FGD5Q6ZNL6 1462 aa24.13■■□□□ 1.45
POLR1E-202ENST00000377798 URB2Q14146 1524 aaKnown RBP24.12■■□□□ 1.45
POLR1E-202ENST00000377798 CSRNP3Q8WYN3 585 aa24.07■■□□□ 1.44
POLR1E-202ENST00000377798 POLA1P09884 1462 aaPredicted RBP24.03■■□□□ 1.44
POLR1E-202ENST00000377798 KIF27Q86VH2 1401 aa24■■□□□ 1.43
POLR1E-202ENST00000377798 MRC2Q9UBG0 1479 aa24■■□□□ 1.43
POLR1E-202ENST00000377798 CUX2O14529 1486 aa23.95■■□□□ 1.42
POLR1E-202ENST00000377798 KIF21BO75037 1637 aa23.95■■□□□ 1.42
POLR1E-202ENST00000377798 EHMT2Q96KQ7 1210 aa23.95■■□□□ 1.42
POLR1E-202ENST00000377798 ERCC6Q03468 1493 aa23.95■■□□□ 1.42
POLR1E-202ENST00000377798 ABCA10Q8WWZ4 1543 aa23.92■■□□□ 1.42
POLR1E-202ENST00000377798 RAD54L2Q9Y4B4 1467 aa23.92■■□□□ 1.42
POLR1E-202ENST00000377798 WDR62O43379 1518 aa23.9■■□□□ 1.42
POLR1E-202ENST00000377798 GOLGA3Q08378 1498 aa23.9■■□□□ 1.42
POLR1E-202ENST00000377798 WDR97A6NE52 1622 aa23.89■■□□□ 1.41
POLR1E-202ENST00000377798 THOC2Q8NI27 1593 aaKnown RBP23.85■■□□□ 1.41
POLR1E-202ENST00000377798 PRXQ9BXM0 1461 aa23.83■■□□□ 1.41
POLR1E-202ENST00000377798 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
POLR1E-202ENST00000377798 ERICH3Q5RHP9 1530 aa23.8■■□□□ 1.4
POLR1E-202ENST00000377798 RAPGEF2Q9Y4G8 1499 aa23.79■■□□□ 1.4
POLR1E-202ENST00000377798 TNIKQ9UKE5 1360 aa23.79■■□□□ 1.4
POLR1E-202ENST00000377798 IGF1RP08069 1367 aa23.78■■□□□ 1.4
POLR1E-202ENST00000377798 ABCA5Q8WWZ7 1642 aa23.76■■□□□ 1.39
POLR1E-202ENST00000377798 UBTFP17480 764 aaKnown RBP23.75■■□□□ 1.39
POLR1E-202ENST00000377798 IFT140Q96RY7 1462 aa23.7■■□□□ 1.38
POLR1E-202ENST00000377798 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
POLR1E-202ENST00000377798 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
POLR1E-202ENST00000377798 CEP162Q5TB80 1403 aa23.67■■□□□ 1.38
POLR1E-202ENST00000377798 CUL7Q14999 1698 aa23.67■■□□□ 1.38
POLR1E-202ENST00000377798 CARMIL1Q5VZK9 1371 aa23.66■■□□□ 1.38
POLR1E-202ENST00000377798 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
POLR1E-202ENST00000377798 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.364e-7■■■■□ 26.1
POLR1E-202ENST00000377798 ZNF608Q9ULD9 1512 aaPredicted RBP23.55■■□□□ 1.36
POLR1E-202ENST00000377798 EIF4G3O43432 1585 aaKnown RBP23.52■■□□□ 1.36
POLR1E-202ENST00000377798 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
POLR1E-202ENST00000377798 CLIP1P30622 1438 aa23.5■■□□□ 1.35
POLR1E-202ENST00000377798 ADAMTS12P58397 1594 aa23.45■■□□□ 1.34
POLR1E-202ENST00000377798 FHAD1B1AJZ9 1412 aa23.42■■□□□ 1.34
POLR1E-202ENST00000377798 CTTNBP2Q8WZ74 1663 aa23.4■■□□□ 1.34
POLR1E-202ENST00000377798 SNAPC4Q5SXM2 1469 aa23.36■■□□□ 1.33
POLR1E-202ENST00000377798 RANGAP1P46060 587 aaPredicted RBP23.35■■□□□ 1.33
POLR1E-202ENST00000377798 MAGI1Q96QZ7 1491 aaPredicted RBP23.33■■□□□ 1.33
POLR1E-202ENST00000377798 ARHGAP35Q9NRY4 1499 aa23.29■■□□□ 1.32
POLR1E-202ENST00000377798 VPS8Q8N3P4 1428 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms